RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 LMOD2Q6P5Q4 547 aa11□□□□□ -0.65
CAST-243ENST00000515160 KCNV2Q8TDN2 545 aa11□□□□□ -0.65
CAST-243ENST00000515160 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.99□□□□□ -0.65
CAST-243ENST00000515160 TMEM106CQ9BVX2 250 aa10.99□□□□□ -0.65
CAST-243ENST00000515160 ARXQ96QS3 562 aa10.98□□□□□ -0.65
CAST-243ENST00000515160 CADPS2Q86UW7 1296 aa10.97□□□□□ -0.65
CAST-243ENST00000515160 ZNF467Q7Z7K2 595 aaPredicted RBP10.95□□□□□ -0.66
CAST-243ENST00000515160 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.95□□□□□ -0.66
CAST-243ENST00000515160 IFNL1Q8IU54 200 aa10.94□□□□□ -0.66
CAST-243ENST00000515160 C14orf37Q86TY3 774 aa10.93□□□□□ -0.66
CAST-243ENST00000515160 IRX5P78411 483 aaPredicted RBP10.92□□□□□ -0.66
CAST-243ENST00000515160 OCEL1Q9H607 264 aa10.92□□□□□ -0.66
CAST-243ENST00000515160 PDAP1Q13442 181 aaKnown RBP10.91□□□□□ -0.66
CAST-243ENST00000515160 CCDC180Q9P1Z9 1646 aa10.9□□□□□ -0.66
CAST-243ENST00000515160 ARHGEF1Q92888 912 aaKnown RBP10.86□□□□□ -0.67
CAST-243ENST00000515160 BRPF1P55201 1214 aaPredicted RBP10.84□□□□□ -0.67
CAST-243ENST00000515160 MFRPQ9BY79 579 aa10.84□□□□□ -0.67
CAST-243ENST00000515160 KRTAP3-3Q9BYR6 98 aa10.84□□□□□ -0.67
CAST-243ENST00000515160 KRTAP3-2Q9BYR7 98 aa10.84□□□□□ -0.67
CAST-243ENST00000515160 EMP3P54852 163 aa10.83□□□□□ -0.68
CAST-243ENST00000515160 PCDHB8Q9UN66 801 aa10.83□□□□□ -0.68
CAST-243ENST00000515160 PSEN1P49768 467 aa10.81□□□□□ -0.68
CAST-243ENST00000515160 C3orf67Q6ZVT6 689 aa10.81□□□□□ -0.68
CAST-243ENST00000515160 ZC3H15Q8WU90 426 aaKnown RBP10.81□□□□□ -0.68
CAST-243ENST00000515160 E2F4Q16254 413 aa10.8□□□□□ -0.68
CAST-243ENST00000515160 POTEB3A0JP26 581 aa10.78□□□□□ -0.68
CAST-243ENST00000515160 NEUROD2Q15784 382 aa10.78□□□□□ -0.68
CAST-243ENST00000515160 POTEBQ6S5H4 581 aa10.78□□□□□ -0.68
CAST-243ENST00000515160 HOMEZQ8IX15 550 aa10.77□□□□□ -0.69
CAST-243ENST00000515160 L3MBTL3Q96JM7 780 aaPredicted RBP10.76□□□□□ -0.69
CAST-243ENST00000515160 TESPA1A2RU30 521 aaPredicted RBP10.75□□□□□ -0.69
CAST-243ENST00000515160 HS3ST6Q96QI5 342 aa10.75□□□□□ -0.69
CAST-243ENST00000515160 SEMA3EO15041 775 aa10.74□□□□□ -0.69
CAST-243ENST00000515160 PPP1R37O75864 691 aa10.74□□□□□ -0.69
CAST-243ENST00000515160 NLRP6P59044 892 aa10.74□□□□□ -0.69
CAST-243ENST00000515160 SLC24A3Q9HC58 644 aa10.74□□□□□ -0.69
CAST-243ENST00000515160 DAXXQ9UER7 740 aaPredicted RBP10.74□□□□□ -0.69
CAST-243ENST00000515160 FAM205CA6NFA0 338 aa10.73□□□□□ -0.69
CAST-243ENST00000515160 GOLGA2Q08379 1002 aa10.73□□□□□ -0.69
CAST-243ENST00000515160 SOX12O15370 315 aa10.72□□□□□ -0.69
CAST-243ENST00000515160 SMYD5Q6GMV2 418 aa10.71□□□□□ -0.69
CAST-243ENST00000515160 MKRN3Q13064 507 aaKnown RBP10.7□□□□□ -0.7
CAST-243ENST00000515160 EFCAB3Q8N7B9 438 aa10.7□□□□□ -0.7
CAST-243ENST00000515160 FBXO22Q8NEZ5 403 aa10.7□□□□□ -0.7
CAST-243ENST00000515160 CABP2Q9NPB3 220 aa10.67□□□□□ -0.7
CAST-243ENST00000515160 PHF8Q9UPP1 1060 aa10.67□□□□□ -0.7
CAST-243ENST00000515160 ZMYND10O75800 440 aa10.65□□□□□ -0.7
CAST-243ENST00000515160 PDE4AP27815 886 aa10.64□□□□□ -0.71
CAST-243ENST00000515160 PDCD7Q8N8D1 485 aaKnown RBP10.64□□□□□ -0.71
CAST-243ENST00000515160 LARP6Q9BRS8 491 aaKnown RBP10.64□□□□□ -0.71
CAST-243ENST00000515160 NCKAP5LQ9HCH0 1330 aa10.62□□□□□ -0.71
CAST-243ENST00000515160 RNF166Q96A37 237 aaPredicted RBP10.61□□□□□ -0.71
CAST-243ENST00000515160 G3V3G9 751 aa10.6□□□□□ -0.71
CAST-243ENST00000515160 MFSD10Q14728 455 aa10.6□□□□□ -0.71
CAST-243ENST00000515160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.6□□□□□ -0.71
CAST-243ENST00000515160 SUPT5HO00267 1087 aaKnown RBP10.59□□□□□ -0.71
CAST-243ENST00000515160 BARGINQ6ZT62 677 aa10.59□□□□□ -0.71
CAST-243ENST00000515160 ARIH1Q9Y4X5 557 aaPredicted RBP10.59□□□□□ -0.71
CAST-243ENST00000515160 DDX27Q96GQ7 796 aaKnown RBP10.57□□□□□ -0.72
CAST-243ENST00000515160 ZNF710Q8N1W2 664 aa10.56□□□□□ -0.72
CAST-243ENST00000515160 CRISPLD2Q9H0B8 497 aa10.56□□□□□ -0.72
CAST-243ENST00000515160 AK7Q96M32 723 aa10.55□□□□□ -0.72
CAST-243ENST00000515160 RB1CC1Q8TDY2 1594 aa10.54□□□□□ -0.72
CAST-243ENST00000515160 CAMK2BQ13554 666 aa10.52□□□□□ -0.73
CAST-243ENST00000515160 ERBB3P21860 1342 aa10.52□□□□□ -0.73
CAST-243ENST00000515160 KRI1Q8N9T8 703 aaKnown RBP10.51□□□□□ -0.73
CAST-243ENST00000515160 MS4A4AQ96JQ5 239 aa10.51□□□□□ -0.73
CAST-243ENST00000515160 HOXB1P14653 301 aaPredicted RBP10.5□□□□□ -0.73
CAST-243ENST00000515160 DOK7Q18PE1 504 aa10.5□□□□□ -0.73
CAST-243ENST00000515160 GPIHBP1Q8IV16 184 aa10.5□□□□□ -0.73
CAST-243ENST00000515160 RIMBP2O15034 1052 aa10.49□□□□□ -0.73
CAST-243ENST00000515160 RBM26Q5T8P6 1007 aaKnown RBP10.48□□□□□ -0.73
CAST-243ENST00000515160 MYT1LQ9UL68 1186 aa10.48□□□□□ -0.73
CAST-243ENST00000515160 GPBP1L1Q9HC44 474 aaPredicted RBP10.46□□□□□ -0.73
CAST-243ENST00000515160 BOLA1Q9Y3E2 137 aa10.46□□□□□ -0.73
CAST-243ENST00000515160 HOXB3P14651 431 aaPredicted RBP10.45□□□□□ -0.74
CAST-243ENST00000515160 MLLT3P42568 568 aaPredicted RBP10.45□□□□□ -0.74
CAST-243ENST00000515160 IL27Q8NEV9 243 aa10.44□□□□□ -0.74
CAST-243ENST00000515160 PTGER2P43116 358 aa10.43□□□□□ -0.74
CAST-243ENST00000515160 UNC13AQ9UPW8 1703 aa10.42□□□□□ -0.74
CAST-243ENST00000515160 ILDR1Q86SU0 546 aaPredicted RBP10.42□□□□□ -0.74
CAST-243ENST00000515160 KDM4CQ9H3R0 1056 aa10.42□□□□□ -0.74
CAST-243ENST00000515160 PPP1R15BQ5SWA1 713 aa10.41□□□□□ -0.74
CAST-243ENST00000515160 ZMYND15Q9H091 742 aa10.4□□□□□ -0.74
CAST-243ENST00000515160 BICRAQ9NZM4 1560 aa10.39□□□□□ -0.75
CAST-243ENST00000515160 TRIM66O15016 1216 aa10.39□□□□□ -0.75
CAST-243ENST00000515160 PDE4DQ08499 809 aa10.39□□□□□ -0.75
CAST-243ENST00000515160 VARS2Q5ST30 1063 aaKnown RBP10.39□□□□□ -0.75
CAST-243ENST00000515160 DPY19L2Q6NUT2 758 aa10.39□□□□□ -0.75
CAST-243ENST00000515160 NACADO15069 1562 aa10.39□□□□□ -0.75
CAST-243ENST00000515160 SPDYE16A6NNV3 312 aaPredicted RBP10.38□□□□□ -0.75
CAST-243ENST00000515160 GPHNQ9NQX3 736 aaPredicted RBP10.38□□□□□ -0.75
CAST-243ENST00000515160 ZNF687Q8N1G0 1237 aa10.35□□□□□ -0.75
CAST-243ENST00000515160 RSPH6AQ9H0K4 717 aa10.35□□□□□ -0.75
CAST-243ENST00000515160 ZSWIM6Q9HCJ5 1215 aa10.35□□□□□ -0.75
CAST-243ENST00000515160 DPYSL4O14531 572 aa10.34□□□□□ -0.75
CAST-243ENST00000515160 PDIA6Q15084 440 aa10.33□□□□□ -0.76
CAST-243ENST00000515160 EMILIN3Q9NT22 766 aa10.32□□□□□ -0.76
CAST-243ENST00000515160 DSG2Q14126 1118 aa10.28□□□□□ -0.76
CAST-243ENST00000515160 MINK1Q8N4C8 1332 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms