RNA–Protein interactions for RNA: ENST00000515090.5

GPM6A-221, Transcript of glycoprotein M6A, human

TSL 2 BASIC

Gene GPM6A, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPM6A-221	ENST00000515090	EHMT2	Q96KQ7	1210 aa		13.42	□□□□□ -0.26
GPM6A-221	ENST00000515090	GOLGA3	Q08378	1498 aa		13.41	□□□□□ -0.26
GPM6A-221	ENST00000515090	KCNH8	Q96L42	1107 aa		13.41	□□□□□ -0.26
GPM6A-221	ENST00000515090	MAP3K4	Q9Y6R4	1608 aa		13.39	□□□□□ -0.27
GPM6A-221	ENST00000515090	KDM4F	A0A1W2PPD8	638 aa		13.39	□□□□□ -0.27
GPM6A-221	ENST00000515090	WDR7	Q9Y4E6	1490 aa		13.38	□□□□□ -0.27
GPM6A-221	ENST00000515090	SAMD9	Q5K651	1589 aa		13.37	□□□□□ -0.27
GPM6A-221	ENST00000515090	ATP10B	O94823	1461 aa		13.36	□□□□□ -0.27
GPM6A-221	ENST00000515090	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.36	□□□□□ -0.27
GPM6A-221	ENST00000515090	CLEC11A	Q9Y240	323 aa		13.36	□□□□□ -0.27
GPM6A-221	ENST00000515090	EEA1	Q15075	1411 aa		13.34	□□□□□ -0.27
GPM6A-221	ENST00000515090	FHOD3	Q2V2M9	1422 aa		13.34	□□□□□ -0.27
GPM6A-221	ENST00000515090	PRKAR2A	P13861	404 aa	Known RBP	13.33	□□□□□ -0.28
GPM6A-221	ENST00000515090	CD109	Q6YHK3	1445 aa		13.32	□□□□□ -0.28
GPM6A-221	ENST00000515090	ZNF692	Q9BU19	519 aa	Predicted RBP	13.3	□□□□□ -0.28
GPM6A-221	ENST00000515090	KIF21B	O75037	1637 aa		13.29	□□□□□ -0.28
GPM6A-221	ENST00000515090	RAPGEF6	Q8TEU7	1601 aa		13.29	□□□□□ -0.28
GPM6A-221	ENST00000515090	MKRN4P	Q13434	485 aa	Predicted RBP	13.29	□□□□□ -0.28
GPM6A-221	ENST00000515090	NUP153	P49790	1475 aa	Known RBP	13.28	□□□□□ -0.28
GPM6A-221	ENST00000515090	CFAP43	Q8NDM7	1665 aa		13.27	□□□□□ -0.29
GPM6A-221	ENST00000515090	TEX14	Q8IWB6	1497 aa		13.26	□□□□□ -0.29
GPM6A-221	ENST00000515090	MAGI3	Q5TCQ9	1506 aa		13.26	□□□□□ -0.29
GPM6A-221	ENST00000515090	UBTF	P17480	764 aa	Known RBP	13.25	□□□□□ -0.29
GPM6A-221	ENST00000515090	SSUH2	Q9Y2M2	353 aa		13.25	□□□□□ -0.29
GPM6A-221	ENST00000515090	ABCA9	Q8IUA7	1624 aa		13.21	□□□□□ -0.29
GPM6A-221	ENST00000515090	ADGRL1	O94910	1474 aa		13.21	□□□□□ -0.29
GPM6A-221	ENST00000515090	C19orf67	A6NJJ6	358 aa		13.21	□□□□□ -0.29
GPM6A-221	ENST00000515090	RAPGEF3	O95398	923 aa		13.2	□□□□□ -0.3
GPM6A-221	ENST00000515090	ARHGAP35	Q9NRY4	1499 aa		13.2	□□□□□ -0.3
GPM6A-221	ENST00000515090	CDK13	Q14004	1512 aa	Known RBP	13.19	□□□□□ -0.3
GPM6A-221	ENST00000515090	EFCAB5	A4FU69	1503 aa		13.18	□□□□□ -0.3
GPM6A-221	ENST00000515090	PLEKHD1	A6NEE1	506 aa		13.17	□□□□□ -0.3
GPM6A-221	ENST00000515090	ARAP3	Q8WWN8	1544 aa		13.16	□□□□□ -0.3
GPM6A-221	ENST00000515090	GABBR2	O75899	941 aa		13.16	□□□□□ -0.3
GPM6A-221	ENST00000515090	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.16	□□□□□ -0.3
GPM6A-221	ENST00000515090	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
GPM6A-221	ENST00000515090	TTC37	Q6PGP7	1564 aa		13.13	□□□□□ -0.31
GPM6A-221	ENST00000515090	LRRIQ1	Q96JM4	1722 aa		13.13	□□□□□ -0.31
GPM6A-221	ENST00000515090	FRMPD1	Q5SYB0	1578 aa		13.12	□□□□□ -0.31
GPM6A-221	ENST00000515090	NEO1	Q92859	1461 aa		13.1	□□□□□ -0.31
GPM6A-221	ENST00000515090	LHX8	Q68G74	356 aa		13.1	□□□□□ -0.31
GPM6A-221	ENST00000515090	PRR29	P0C7W0	189 aa		13.09	□□□□□ -0.31
GPM6A-221	ENST00000515090	CHADL	Q6NUI6	762 aa		13.09	□□□□□ -0.31
GPM6A-221	ENST00000515090	AKNA	Q7Z591	1439 aa		13.08	□□□□□ -0.31
GPM6A-221	ENST00000515090	FMN1	Q68DA7	1419 aa		13.08	□□□□□ -0.32
GPM6A-221	ENST00000515090	PHLDB1	Q86UU1	1377 aa		13.07	□□□□□ -0.32
GPM6A-221	ENST00000515090	KIF14	Q15058	1648 aa		13.07	□□□□□ -0.32
GPM6A-221	ENST00000515090	FANCA	O15360	1455 aa		13.07	□□□□□ -0.32
GPM6A-221	ENST00000515090	RICTOR	Q6R327	1708 aa		13.06	□□□□□ -0.32
GPM6A-221	ENST00000515090	HECW1	Q76N89	1606 aa		13.05	□□□□□ -0.32
GPM6A-221	ENST00000515090	SIGLEC1	Q9BZZ2	1709 aa		13.05	□□□□□ -0.32
GPM6A-221	ENST00000515090	DENND4B	O75064	1496 aa	Predicted RBP	13.04	□□□□□ -0.32
GPM6A-221	ENST00000515090	PLCH2	O75038	1416 aa		13.03	□□□□□ -0.32
GPM6A-221	ENST00000515090	YEATS2	Q9ULM3	1422 aa		13.02	□□□□□ -0.32
GPM6A-221	ENST00000515090	PCF11	O94913	1555 aa	Known RBP	13.02	□□□□□ -0.32
GPM6A-221	ENST00000515090	ADAMTSL3	P82987	1691 aa		13.01	□□□□□ -0.33
GPM6A-221	ENST00000515090	SCAPER	Q9BY12	1400 aa		13.01	□□□□□ -0.33
GPM6A-221	ENST00000515090	HECW2	Q9P2P5	1572 aa		13	□□□□□ -0.33
GPM6A-221	ENST00000515090	TRO	Q12816	1431 aa	Predicted RBP	13	□□□□□ -0.33
GPM6A-221	ENST00000515090	CASKIN1	Q8WXD9	1431 aa		12.99	□□□□□ -0.33
GPM6A-221	ENST00000515090	ARID4B	Q4LE39	1312 aa	Predicted RBP	12.99	□□□□□ -0.33
GPM6A-221	ENST00000515090	BCORL1	Q5H9F3	1711 aa		12.98	□□□□□ -0.33
GPM6A-221	ENST00000515090	CLIP1	P30622	1438 aa		12.98	□□□□□ -0.33
GPM6A-221	ENST00000515090	MYO5C	Q9NQX4	1742 aa		12.98	□□□□□ -0.33
GPM6A-221	ENST00000515090	AFAP1	Q8N556	730 aa		12.98	□□□□□ -0.33
GPM6A-221	ENST00000515090	CDK11A	Q9UQ88	783 aa	Predicted RBP	12.98	□□□□□ -0.33
GPM6A-221	ENST00000515090	ARHGEF40	Q8TER5	1519 aa		12.97	□□□□□ -0.33
GPM6A-221	ENST00000515090	PTPRM	P28827	1452 aa		12.97	□□□□□ -0.33
GPM6A-221	ENST00000515090	CDC42BPB	Q9Y5S2	1711 aa		12.97	□□□□□ -0.33
GPM6A-221	ENST00000515090	MADD	Q8WXG6	1647 aa		12.97	□□□□□ -0.33
GPM6A-221	ENST00000515090	CFAP74	Q9C0B2	1584 aa		12.97	□□□□□ -0.33
GPM6A-221	ENST00000515090	EFCAB2	Q5VUJ9	269 aa		12.97	□□□□□ -0.33
GPM6A-221	ENST00000515090	ZMYM4	Q5VZL5	1548 aa		12.96	□□□□□ -0.33
GPM6A-221	ENST00000515090	POGZ	Q7Z3K3	1410 aa		12.96	□□□□□ -0.34
GPM6A-221	ENST00000515090	LOC105371045	A0A1W2PR82	267 aa		12.95	□□□□□ -0.34
GPM6A-221	ENST00000515090	MLEC	Q14165	292 aa		12.95	□□□□□ -0.34
GPM6A-221	ENST00000515090	ARHGEF12	Q9NZN5	1544 aa		12.95	□□□□□ -0.34
GPM6A-221	ENST00000515090	ZFYVE16	Q7Z3T8	1539 aa		12.94	□□□□□ -0.34
GPM6A-221	ENST00000515090	ARHGAP5	Q13017	1502 aa		12.93	□□□□□ -0.34
GPM6A-221	ENST00000515090	RIMS1	Q86UR5	1692 aa	Known RBP	12.92	□□□□□ -0.34
GPM6A-221	ENST00000515090	TRAPPC8	Q9Y2L5	1435 aa		12.91	□□□□□ -0.34
GPM6A-221	ENST00000515090	CDC42BPA	Q5VT25	1732 aa		12.91	□□□□□ -0.34
GPM6A-221	ENST00000515090	FYCO1	Q9BQS8	1478 aa		12.91	□□□□□ -0.34
GPM6A-221	ENST00000515090	CCDC18	Q5T9S5	1454 aa		12.9	□□□□□ -0.34
GPM6A-221	ENST00000515090	MAGI2	Q86UL8	1455 aa		12.89	□□□□□ -0.35
GPM6A-221	ENST00000515090	POTEI	P0CG38	1075 aa		12.89	□□□□□ -0.35
GPM6A-221	ENST00000515090	CD44	P16070	742 aa	Known RBP	12.89	□□□□□ -0.35
GPM6A-221	ENST00000515090	PREX2	Q70Z35	1606 aa		12.89	□□□□□ -0.35
GPM6A-221	ENST00000515090	ATP10A	O60312	1499 aa		12.89	□□□□□ -0.35
GPM6A-221	ENST00000515090	ILDR1	Q86SU0	546 aa	Predicted RBP	12.88	□□□□□ -0.35
GPM6A-221	ENST00000515090	ZNF777	Q9ULD5	760 aa	Predicted RBP	12.88	□□□□□ -0.35
GPM6A-221	ENST00000515090	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.88	□□□□□ -0.35
GPM6A-221	ENST00000515090	CEP162	Q5TB80	1403 aa		12.87	□□□□□ -0.35
GPM6A-221	ENST00000515090	KDM5C	P41229	1560 aa		12.87	□□□□□ -0.35
GPM6A-221	ENST00000515090	GPATCH8	Q9UKJ3	1502 aa	Known RBP	12.87	□□□□□ -0.35
GPM6A-221	ENST00000515090	CEBPA	P49715	358 aa	Predicted RBP	12.87	□□□□□ -0.35
GPM6A-221	ENST00000515090	HNRNPM	P52272	730 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
GPM6A-221	ENST00000515090	ZNF518A	Q6AHZ1	1483 aa		12.86	□□□□□ -0.35
GPM6A-221	ENST00000515090	HSPA2	P54652	639 aa		12.86	□□□□□ -0.35
GPM6A-221	ENST00000515090	ABCC1	P33527	1531 aa		12.85	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms