RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 PTPN23Q9H3S7 1636 aa10.51□□□□□ -0.73
PDLIM5-219ENST00000514743 FAM50AQ14320 339 aaKnown RBP10.51□□□□□ -0.73
PDLIM5-219ENST00000514743 ZMYND15Q9H091 742 aa10.51□□□□□ -0.73
PDLIM5-219ENST00000514743 AAMPQ13685 434 aa10.5□□□□□ -0.73
PDLIM5-219ENST00000514743 CCDC18Q5T9S5 1454 aa10.5□□□□□ -0.73
PDLIM5-219ENST00000514743 MYOM3Q5VTT5 1437 aa10.5□□□□□ -0.73
PDLIM5-219ENST00000514743 MTUS2Q5JR59 1369 aa10.49□□□□□ -0.73
PDLIM5-219ENST00000514743 HOMEZQ8IX15 550 aa10.49□□□□□ -0.73
PDLIM5-219ENST00000514743 KIAA0556O60303 1618 aa10.49□□□□□ -0.73
PDLIM5-219ENST00000514743 GCC2Q8IWJ2 1684 aa10.48□□□□□ -0.73
PDLIM5-219ENST00000514743 EPRSP07814 1512 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-219ENST00000514743 RBM10P98175 930 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-219ENST00000514743 SUPT16HQ9Y5B9 1047 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-219ENST00000514743 CDK13Q14004 1512 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-219ENST00000514743 DISP1Q96F81 1524 aa10.47□□□□□ -0.73
PDLIM5-219ENST00000514743 HFM1A2PYH4 1435 aa10.46□□□□□ -0.73
PDLIM5-219ENST00000514743 TCOF1Q13428 1488 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-219ENST00000514743 FOXD1Q16676 465 aa10.46□□□□□ -0.74
PDLIM5-219ENST00000514743 VSIG10Q8N0Z9 540 aa10.45□□□□□ -0.74
PDLIM5-219ENST00000514743 GRIN2AQ12879 1464 aa10.45□□□□□ -0.74
PDLIM5-219ENST00000514743 KIAA0586Q9BVV6 1533 aa10.44□□□□□ -0.74
PDLIM5-219ENST00000514743 NAIPQ13075 1403 aa10.44□□□□□ -0.74
PDLIM5-219ENST00000514743 CEP170Q5SW79 1584 aa10.43□□□□□ -0.74
PDLIM5-219ENST00000514743 RAPGEF6Q8TEU7 1601 aa10.43□□□□□ -0.74
PDLIM5-219ENST00000514743 DHX37Q8IY37 1157 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-219ENST00000514743 IL27Q8NEV9 243 aa10.42□□□□□ -0.74
PDLIM5-219ENST00000514743 SIN3AQ96ST3 1273 aa10.42□□□□□ -0.74
PDLIM5-219ENST00000514743 KDM6BO15054 1643 aa10.42□□□□□ -0.74
PDLIM5-219ENST00000514743 UACAQ9BZF9 1416 aa10.41□□□□□ -0.74
PDLIM5-219ENST00000514743 TAOK2Q9UL54 1235 aa10.41□□□□□ -0.74
PDLIM5-219ENST00000514743 MAGI1Q96QZ7 1491 aaPredicted RBP10.4□□□□□ -0.74
PDLIM5-219ENST00000514743 NUP153P49790 1475 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-219ENST00000514743 CHMP4AQ9BY43 222 aa10.4□□□□□ -0.75
PDLIM5-219ENST00000514743 HAP1P54257 671 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-219ENST00000514743 KDM5BQ9UGL1 1544 aa10.39□□□□□ -0.75
PDLIM5-219ENST00000514743 DENND4BO75064 1496 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-219ENST00000514743 ERCC6Q03468 1493 aa10.39□□□□□ -0.75
PDLIM5-219ENST00000514743 FKBP8Q14318 412 aa10.38□□□□□ -0.75
PDLIM5-219ENST00000514743 PAXIP1Q6ZW49 1069 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-219ENST00000514743 RBM19Q9Y4C8 960 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-219ENST00000514743 AKNAQ7Z591 1439 aa10.38□□□□□ -0.75
PDLIM5-219ENST00000514743 MIA2Q96PC5 1412 aa10.38□□□□□ -0.75
PDLIM5-219ENST00000514743 SYNJ2O15056 1496 aa10.37□□□□□ -0.75
PDLIM5-219ENST00000514743 MSH5O43196 834 aa10.37□□□□□ -0.75
PDLIM5-219ENST00000514743 DNMT1P26358 1616 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-219ENST00000514743 ADCY10Q96PN6 1610 aa10.37□□□□□ -0.75
PDLIM5-219ENST00000514743 NPM2Q86SE8 214 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-219ENST00000514743 NUP160Q12769 1436 aa10.34□□□□□ -0.75
PDLIM5-219ENST00000514743 CROCC2H7BZ55 1655 aa10.34□□□□□ -0.75
PDLIM5-219ENST00000514743 ITSN2Q9NZM3 1697 aa10.33□□□□□ -0.76
PDLIM5-219ENST00000514743 KIF14Q15058 1648 aa10.33□□□□□ -0.76
PDLIM5-219ENST00000514743 PPP1R15AO75807 674 aaPredicted RBP10.33□□□□□ -0.76
PDLIM5-219ENST00000514743 BRD2P25440 801 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-219ENST00000514743 RSPH6AQ9H0K4 717 aa10.32□□□□□ -0.76
PDLIM5-219ENST00000514743 ADGBQ8N7X0 1667 aa10.31□□□□□ -0.76
PDLIM5-219ENST00000514743 DAPK1P53355 1430 aa10.31□□□□□ -0.76
PDLIM5-219ENST00000514743 PLB1Q6P1J6 1458 aa10.31□□□□□ -0.76
PDLIM5-219ENST00000514743 ARID3CA6NKF2 412 aa10.31□□□□□ -0.76
PDLIM5-219ENST00000514743 CDC42BPAQ5VT25 1732 aa10.3□□□□□ -0.76
PDLIM5-219ENST00000514743 ABCA8O94911 1581 aa10.29□□□□□ -0.76
PDLIM5-219ENST00000514743 ABCC5O15440 1437 aa10.29□□□□□ -0.76
PDLIM5-219ENST00000514743 C14orf37Q86TY3 774 aa10.29□□□□□ -0.76
PDLIM5-219ENST00000514743 RRP7BPQ9NSQ0 103 aa10.29□□□□□ -0.76
PDLIM5-219ENST00000514743 TROQ12816 1431 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-219ENST00000514743 CHIC2Q9UKJ5 165 aa10.28□□□□□ -0.76
PDLIM5-219ENST00000514743 PRG4Q92954 1404 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-219ENST00000514743 ROCK1Q13464 1354 aa10.28□□□□□ -0.76
PDLIM5-219ENST00000514743 TONSLQ96HA7 1378 aa10.27□□□□□ -0.76
PDLIM5-219ENST00000514743 CAMSAP2Q08AD1 1489 aa10.27□□□□□ -0.77
PDLIM5-219ENST00000514743 CHD1O14646 1710 aa10.27□□□□□ -0.77
PDLIM5-219ENST00000514743 NAP1L5Q96NT1 182 aaPredicted RBP10.26□□□□□ -0.77
PDLIM5-219ENST00000514743 TPRNQ4KMQ1 711 aa10.26□□□□□ -0.77
PDLIM5-219ENST00000514743 SAMD1Q6SPF0 538 aaPredicted RBP10.26□□□□□ -0.77
PDLIM5-219ENST00000514743 CHMP7Q8WUX9 453 aaPredicted RBP10.26□□□□□ -0.77
PDLIM5-219ENST00000514743 GPATCH8Q9UKJ3 1502 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-219ENST00000514743 ZNF644Q9H582 1327 aaPredicted RBP10.25□□□□□ -0.77
PDLIM5-219ENST00000514743 CARMIL2Q6F5E8 1435 aa10.24□□□□□ -0.77
PDLIM5-219ENST00000514743 KCNH8Q96L42 1107 aa10.23□□□□□ -0.77
PDLIM5-219ENST00000514743 HIRIP3Q9BW71 556 aaPredicted RBP10.23□□□□□ -0.77
PDLIM5-219ENST00000514743 ADGRL2O95490 1459 aa10.23□□□□□ -0.77
PDLIM5-219ENST00000514743 ABCC10Q5T3U5 1492 aa10.23□□□□□ -0.77
PDLIM5-219ENST00000514743 DDX10Q13206 875 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-219ENST00000514743 RSPH4AQ5TD94 716 aa10.22□□□□□ -0.77
PDLIM5-219ENST00000514743 ZNF326Q5BKZ1 582 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-219ENST00000514743 JPH4Q96JJ6 628 aa10.22□□□□□ -0.77
PDLIM5-219ENST00000514743 SHROOM2Q13796 1616 aa10.22□□□□□ -0.77
PDLIM5-219ENST00000514743 POLR1AO95602 1720 aaPredicted RBP10.21□□□□□ -0.77
PDLIM5-219ENST00000514743 TEX14Q8IWB6 1497 aa10.21□□□□□ -0.77
PDLIM5-219ENST00000514743 MPHOSPH9Q99550 1183 aa10.21□□□□□ -0.77
PDLIM5-219ENST00000514743 ATP10BO94823 1461 aa10.21□□□□□ -0.78
PDLIM5-219ENST00000514743 PZPP20742 1482 aa10.21□□□□□ -0.78
PDLIM5-219ENST00000514743 RPRD2Q5VT52 1461 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-219ENST00000514743 CDC42BPBQ9Y5S2 1711 aa10.2□□□□□ -0.78
PDLIM5-219ENST00000514743 FBLN2P98095 1184 aa10.2□□□□□ -0.78
PDLIM5-219ENST00000514743 CDK11AQ9UQ88 783 aaPredicted RBP10.2□□□□□ -0.78
PDLIM5-219ENST00000514743 ANKRD30BQ9BXX2 1392 aa10.2□□□□□ -0.78
PDLIM5-219ENST00000514743 NCOA1Q15788 1441 aa10.19□□□□□ -0.78
PDLIM5-219ENST00000514743 FANCIQ9NVI1 1328 aa10.19□□□□□ -0.78
PDLIM5-219ENST00000514743 PLCB2Q00722 1185 aa10.19□□□□□ -0.78
PDLIM5-219ENST00000514743 NBR1Q14596 966 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms