RNA–Protein interactions for RNA: ENST00000513942.5

SGCA-210, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-210ENST00000513942 MYO5CQ9NQX4 1742 aa24.49■■□□□ 1.51
SGCA-210ENST00000513942 MLECQ14165 292 aa24.49■■□□□ 1.51
SGCA-210ENST00000513942 PLCH2O75038 1416 aa24.49■■□□□ 1.51
SGCA-210ENST00000513942 SCAPERQ9BY12 1400 aa24.49■■□□□ 1.51
SGCA-210ENST00000513942 PREX1Q8TCU6 1659 aa24.46■■□□□ 1.51
SGCA-210ENST00000513942 ARHGEF12Q9NZN5 1544 aa24.45■■□□□ 1.51
SGCA-210ENST00000513942 ATP10AO60312 1499 aa24.44■■□□□ 1.5
SGCA-210ENST00000513942 C9orf84Q5VXU9 1444 aa24.44■■□□□ 1.5
SGCA-210ENST00000513942 CERKQ8TCT0 537 aa24.41■■□□□ 1.5
SGCA-210ENST00000513942 KIF14Q15058 1648 aa24.39■■□□□ 1.5
SGCA-210ENST00000513942 FMN1Q68DA7 1419 aa24.37■■□□□ 1.49
SGCA-210ENST00000513942 EFCAB2Q5VUJ9 269 aa24.36■■□□□ 1.49
SGCA-210ENST00000513942 ZNF518AQ6AHZ1 1483 aa24.36■■□□□ 1.49
SGCA-210ENST00000513942 ATP1B4Q9UN42 357 aaPredicted RBP24.35■■□□□ 1.49
SGCA-210ENST00000513942 KDM5CP41229 1560 aa24.34■■□□□ 1.49
SGCA-210ENST00000513942 ARHGAP5Q13017 1502 aa24.33■■□□□ 1.49
SGCA-210ENST00000513942 ARHGAP35Q9NRY4 1499 aa24.32■■□□□ 1.48
SGCA-210ENST00000513942 STRCQ7RTU9 1775 aa24.31■■□□□ 1.48
SGCA-210ENST00000513942 CDK11AQ9UQ88 783 aaPredicted RBP24.31■■□□□ 1.48
SGCA-210ENST00000513942 DIP2CQ9Y2E4 1556 aa24.3■■□□□ 1.48
SGCA-210ENST00000513942 CEBPAP49715 358 aaPredicted RBP24.3■■□□□ 1.48
SGCA-210ENST00000513942 LRRIQ1Q96JM4 1722 aa24.3■■□□□ 1.48
SGCA-210ENST00000513942 TROQ12816 1431 aaPredicted RBP24.29■■□□□ 1.48
SGCA-210ENST00000513942 SETD1BQ9UPS6 1966 aaKnown RBP24.29■■□□□ 1.48
SGCA-210ENST00000513942 CLIP1P30622 1438 aa24.27■■□□□ 1.48
SGCA-210ENST00000513942 UHRF1BP1Q6BDS2 1440 aa24.27■■□□□ 1.48
SGCA-210ENST00000513942 REREQ9P2R6 1566 aa24.27■■□□□ 1.48
SGCA-210ENST00000513942 ABCA6Q8N139 1617 aa24.27■■□□□ 1.48
SGCA-210ENST00000513942 UBTFP17480 764 aaKnown RBP24.26■■□□□ 1.47
SGCA-210ENST00000513942 EHMT2Q96KQ7 1210 aa24.26■■□□□ 1.47
SGCA-210ENST00000513942 CDC42BPBQ9Y5S2 1711 aa24.26■■□□□ 1.47
SGCA-210ENST00000513942 C3P01024 1663 aa24.24■■□□□ 1.47
SGCA-210ENST00000513942 AFAP1Q8N556 730 aa24.24■■□□□ 1.47
SGCA-210ENST00000513942 MYT1LQ9UL68 1186 aa24.23■■□□□ 1.47
SGCA-210ENST00000513942 PREX2Q70Z35 1606 aa24.22■■□□□ 1.47
SGCA-210ENST00000513942 DMRT2Q9Y5R5 561 aa24.22■■□□□ 1.47
SGCA-210ENST00000513942 MLH3Q9UHC1 1453 aa24.2■■□□□ 1.47
SGCA-210ENST00000513942 LOC105371045A0A1W2PR82 267 aa24.2■■□□□ 1.46
SGCA-210ENST00000513942 ITSN2Q9NZM3 1697 aa24.2■■□□□ 1.46
SGCA-210ENST00000513942 ABCC1P33527 1531 aa24.2■■□□□ 1.46
SGCA-210ENST00000513942 AGLP35573 1532 aa24.17■■□□□ 1.46
SGCA-210ENST00000513942 TRAPPC8Q9Y2L5 1435 aa24.14■■□□□ 1.45
SGCA-210ENST00000513942 KIDINS220Q9ULH0 1771 aa24.14■■□□□ 1.45
SGCA-210ENST00000513942 PTPRTO14522 1441 aa24.13■■□□□ 1.45
SGCA-210ENST00000513942 DISP3Q9P2K9 1392 aa24.13■■□□□ 1.45
SGCA-210ENST00000513942 CDC42BPAQ5VT25 1732 aa24.12■■□□□ 1.45
SGCA-210ENST00000513942 CCDC18Q5T9S5 1454 aa24.12■■□□□ 1.45
SGCA-210ENST00000513942 ESF1Q9H501 851 aaKnown RBP24.11■■□□□ 1.45
SGCA-210ENST00000513942 CASKIN1Q8WXD9 1431 aa24.07■■□□□ 1.44
SGCA-210ENST00000513942 CNTLNQ9NXG0 1405 aa24.07■■□□□ 1.44
SGCA-210ENST00000513942 LTBP4Q8N2S1 1624 aa24.06■■□□□ 1.44
SGCA-210ENST00000513942 SPATA31D1Q6ZQQ2 1576 aa24.06■■□□□ 1.44
SGCA-210ENST00000513942 MROH2AA6NES4 1674 aa24.05■■□□□ 1.44
SGCA-210ENST00000513942 NCOA1Q15788 1441 aa24.05■■□□□ 1.44
SGCA-210ENST00000513942 ILDR2Q71H61 639 aa24.05■■□□□ 1.44
SGCA-210ENST00000513942 SAMD9LQ8IVG5 1584 aa24.03■■□□□ 1.44
SGCA-210ENST00000513942 IQSEC2Q5JU85 1478 aa24.01■■□□□ 1.43
SGCA-210ENST00000513942 CAMSAP1Q5T5Y3 1602 aa24■■□□□ 1.43
SGCA-210ENST00000513942 SYCP2Q9BX26 1530 aa24■■□□□ 1.43
SGCA-210ENST00000513942 SUPT6HQ7KZ85 1726 aaKnown RBP23.99■■□□□ 1.43
SGCA-210ENST00000513942 NPATQ14207 1427 aa23.99■■□□□ 1.43
SGCA-210ENST00000513942 SOCS7O14512 581 aa23.97■■□□□ 1.43
SGCA-210ENST00000513942 FYCO1Q9BQS8 1478 aa23.97■■□□□ 1.43
SGCA-210ENST00000513942 CLTCQ00610 1675 aaKnown RBP23.95■■□□□ 1.42
SGCA-210ENST00000513942 ZNF777Q9ULD5 760 aaPredicted RBP23.94■■□□□ 1.42
SGCA-210ENST00000513942 ZNF142P52746 1687 aaPredicted RBP23.94■■□□□ 1.42
SGCA-210ENST00000513942 MYO3AQ8NEV4 1616 aa23.94■■□□□ 1.42
SGCA-210ENST00000513942 ATP7AQ04656 1500 aa23.94■■□□□ 1.42
SGCA-210ENST00000513942 INO80Q9ULG1 1556 aaPredicted RBP23.93■■□□□ 1.42
SGCA-210ENST00000513942 PLXNC1O60486 1568 aa23.92■■□□□ 1.42
SGCA-210ENST00000513942 GPATCH8Q9UKJ3 1502 aaKnown RBP23.92■■□□□ 1.42
SGCA-210ENST00000513942 ZMYM3Q14202 1370 aa23.91■■□□□ 1.42
SGCA-210ENST00000513942 SPAG9O60271 1321 aaKnown RBP23.91■■□□□ 1.42
SGCA-210ENST00000513942 CEP170BQ9Y4F5 1589 aaPredicted RBP23.87■■□□□ 1.41
SGCA-210ENST00000513942 A2MP01023 1474 aa23.87■■□□□ 1.41
SGCA-210ENST00000513942 PLEKHH2Q8IVE3 1493 aa23.87■■□□□ 1.41
SGCA-210ENST00000513942 HNRNPMP52272 730 aaKnown RBP eCLIP23.86■■□□□ 1.41
SGCA-210ENST00000513942 PLA2R1Q13018 1463 aa23.86■■□□□ 1.41
SGCA-210ENST00000513942 KIAA1107Q9UPP5 1409 aa23.85■■□□□ 1.41
SGCA-210ENST00000513942 NCKAP5LQ9HCH0 1330 aa23.84■■□□□ 1.41
SGCA-210ENST00000513942 ZNF335Q9H4Z2 1342 aaPredicted RBP23.84■■□□□ 1.41
SGCA-210ENST00000513942 ADGBQ8N7X0 1667 aa23.83■■□□□ 1.41
SGCA-210ENST00000513942 PTPRKQ15262 1439 aa23.83■■□□□ 1.4
SGCA-210ENST00000513942 CEP162Q5TB80 1403 aa23.83■■□□□ 1.4
SGCA-210ENST00000513942 TCOF1Q13428 1488 aaKnown RBP23.81■■□□□ 1.4
SGCA-210ENST00000513942 CCNB3Q8WWL7 1395 aa23.8■■□□□ 1.4
SGCA-210ENST00000513942 CFDP1Q9UEE9 299 aaPredicted RBP23.8■■□□□ 1.4
SGCA-210ENST00000513942 PKD2Q13563 968 aa23.79■■□□□ 1.4
SGCA-210ENST00000513942 UBAP1LF5GYI3 381 aa23.77■■□□□ 1.4
SGCA-210ENST00000513942 GGT6Q6P531 493 aa23.77■■□□□ 1.4
SGCA-210ENST00000513942 MTUS2Q5JR59 1369 aa23.74■■□□□ 1.39
SGCA-210ENST00000513942 TIAM1Q13009 1591 aa23.74■■□□□ 1.39
SGCA-210ENST00000513942 A2ML1A8K2U0 1454 aa23.73■■□□□ 1.39
SGCA-210ENST00000513942 DNMT1P26358 1616 aaKnown RBP23.73■■□□□ 1.39
SGCA-210ENST00000513942 POLR1AO95602 1720 aaPredicted RBP23.73■■□□□ 1.39
SGCA-210ENST00000513942 PPP6R1Q9UPN7 881 aa23.71■■□□□ 1.39
SGCA-210ENST00000513942 EHBP1L1Q8N3D4 1523 aa23.69■■□□□ 1.38
SGCA-210ENST00000513942 MBD5Q9P267 1494 aa23.68■■□□□ 1.38
SGCA-210ENST00000513942 ZNF644Q9H582 1327 aaPredicted RBP23.66■■□□□ 1.38
SGCA-210ENST00000513942 RTEL1-TNFRSF6BF6WH68 1400 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms