RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 EHBP1L1Q8N3D4 1523 aa11.55□□□□□ -0.56
DDR1-273ENST00000513514 UGGT2Q9NYU1 1516 aa11.55□□□□□ -0.56
DDR1-273ENST00000513514 HFM1A2PYH4 1435 aa11.55□□□□□ -0.56
DDR1-273ENST00000513514 CD109Q6YHK3 1445 aa11.55□□□□□ -0.56
DDR1-273ENST00000513514 PTPRMP28827 1452 aa11.55□□□□□ -0.56
DDR1-273ENST00000513514 LMTK3Q96Q04 1460 aa11.54□□□□□ -0.56
DDR1-273ENST00000513514 MTUS2Q5JR59 1369 aa11.54□□□□□ -0.56
DDR1-273ENST00000513514 ADAMTSL3P82987 1691 aa11.52□□□□□ -0.56
DDR1-273ENST00000513514 FHOD3Q2V2M9 1422 aa11.52□□□□□ -0.56
DDR1-273ENST00000513514 MYOM3Q5VTT5 1437 aa11.52□□□□□ -0.56
DDR1-273ENST00000513514 SUPT6HQ7KZ85 1726 aaKnown RBP11.52□□□□□ -0.57
DDR1-273ENST00000513514 MIA2Q96PC5 1412 aa11.52□□□□□ -0.57
DDR1-273ENST00000513514 KCNH8Q96L42 1107 aa11.51□□□□□ -0.57
DDR1-273ENST00000513514 MADDQ8WXG6 1647 aa11.5□□□□□ -0.57
DDR1-273ENST00000513514 FAM50AQ14320 339 aaKnown RBP11.5□□□□□ -0.57
DDR1-273ENST00000513514 TCOF1Q13428 1488 aaKnown RBP11.5□□□□□ -0.57
DDR1-273ENST00000513514 ABCA8O94911 1581 aa11.5□□□□□ -0.57
DDR1-273ENST00000513514 CCER2I3L3R5 266 aa11.49□□□□□ -0.57
DDR1-273ENST00000513514 PPP1R15AO75807 674 aaPredicted RBP11.49□□□□□ -0.57
DDR1-273ENST00000513514 HECW1Q76N89 1606 aa11.48□□□□□ -0.57
DDR1-273ENST00000513514 ARID3CA6NKF2 412 aa11.47□□□□□ -0.57
DDR1-273ENST00000513514 BCORL1Q5H9F3 1711 aa11.46□□□□□ -0.57
DDR1-273ENST00000513514 FRMPD1Q5SYB0 1578 aa11.46□□□□□ -0.57
DDR1-273ENST00000513514 ARAP3Q8WWN8 1544 aa11.46□□□□□ -0.57
DDR1-273ENST00000513514 NCOA2Q15596 1464 aa11.46□□□□□ -0.57
DDR1-273ENST00000513514 ILDR2Q71H61 639 aa11.46□□□□□ -0.57
DDR1-273ENST00000513514 HSPA2P54652 639 aa11.45□□□□□ -0.58
DDR1-273ENST00000513514 RAPGEF3O95398 923 aa11.44□□□□□ -0.58
DDR1-273ENST00000513514 PTPN23Q9H3S7 1636 aa11.44□□□□□ -0.58
DDR1-273ENST00000513514 RIMS1Q86UR5 1692 aaKnown RBP11.43□□□□□ -0.58
DDR1-273ENST00000513514 ITGAEP38570 1179 aa11.43□□□□□ -0.58
DDR1-273ENST00000513514 NAIPQ13075 1403 aa11.43□□□□□ -0.58
DDR1-273ENST00000513514 ROCK1Q13464 1354 aa11.42□□□□□ -0.58
DDR1-273ENST00000513514 TONSLQ96HA7 1378 aa11.42□□□□□ -0.58
DDR1-273ENST00000513514 YTHDC1Q96MU7 727 aaKnown RBP11.42□□□□□ -0.58
DDR1-273ENST00000513514 PLPPR3Q6T4P5 718 aa11.41□□□□□ -0.58
DDR1-273ENST00000513514 ARHGEF40Q8TER5 1519 aa11.4□□□□□ -0.58
DDR1-273ENST00000513514 ABCA9Q8IUA7 1624 aa11.4□□□□□ -0.58
DDR1-273ENST00000513514 ATP1B4Q9UN42 357 aaPredicted RBP11.4□□□□□ -0.58
DDR1-273ENST00000513514 CDK11AQ9UQ88 783 aaPredicted RBP11.4□□□□□ -0.58
DDR1-273ENST00000513514 DISP3Q9P2K9 1392 aa11.4□□□□□ -0.59
DDR1-273ENST00000513514 GCC2Q8IWJ2 1684 aa11.4□□□□□ -0.59
DDR1-273ENST00000513514 ARID4BQ4LE39 1312 aaPredicted RBP11.39□□□□□ -0.59
DDR1-273ENST00000513514 P3H3Q8IVL6 736 aa11.39□□□□□ -0.59
DDR1-273ENST00000513514 SIGLEC1Q9BZZ2 1709 aa11.39□□□□□ -0.59
DDR1-273ENST00000513514 ATP10BO94823 1461 aa11.38□□□□□ -0.59
DDR1-273ENST00000513514 ANP32CO43423 234 aa11.37□□□□□ -0.59
DDR1-273ENST00000513514 CERKQ8TCT0 537 aa11.37□□□□□ -0.59
DDR1-273ENST00000513514 SOCS7O14512 581 aa11.36□□□□□ -0.59
DDR1-273ENST00000513514 SPATA31D1Q6ZQQ2 1576 aa11.34□□□□□ -0.59
DDR1-273ENST00000513514 NEO1Q92859 1461 aa11.34□□□□□ -0.59
DDR1-273ENST00000513514 LRRIQ1Q96JM4 1722 aa11.34□□□□□ -0.59
DDR1-273ENST00000513514 PTPRKQ15262 1439 aa11.34□□□□□ -0.59
DDR1-273ENST00000513514 SIN3AQ96ST3 1273 aa11.33□□□□□ -0.6
DDR1-273ENST00000513514 YEATS2Q9ULM3 1422 aa11.32□□□□□ -0.6
DDR1-273ENST00000513514 RICTORQ6R327 1708 aa11.32□□□□□ -0.6
DDR1-273ENST00000513514 ERICH6BQ5W0A0 696 aa11.31□□□□□ -0.6
DDR1-273ENST00000513514 SUPT16HQ9Y5B9 1047 aaKnown RBP11.31□□□□□ -0.6
DDR1-273ENST00000513514 DDX10Q13206 875 aaKnown RBP11.29□□□□□ -0.6
DDR1-273ENST00000513514 DNMT1P26358 1616 aaKnown RBP11.28□□□□□ -0.6
DDR1-273ENST00000513514 RAPGEF6Q8TEU7 1601 aa11.28□□□□□ -0.6
DDR1-273ENST00000513514 FANCAO15360 1455 aa11.28□□□□□ -0.6
DDR1-273ENST00000513514 DENND4BO75064 1496 aaPredicted RBP11.28□□□□□ -0.6
DDR1-273ENST00000513514 MLECQ14165 292 aa11.28□□□□□ -0.6
DDR1-273ENST00000513514 ZFYVE16Q7Z3T8 1539 aa11.28□□□□□ -0.6
DDR1-273ENST00000513514 FER1L4A9Z1Z3 1794 aa11.28□□□□□ -0.6
DDR1-273ENST00000513514 TTC37Q6PGP7 1564 aa11.28□□□□□ -0.6
DDR1-273ENST00000513514 ZMYM4Q5VZL5 1548 aa11.27□□□□□ -0.61
DDR1-273ENST00000513514 NEFLP07196 543 aa11.27□□□□□ -0.61
DDR1-273ENST00000513514 NUP153P49790 1475 aaKnown RBP11.26□□□□□ -0.61
DDR1-273ENST00000513514 EIF4G2P78344 907 aaKnown RBP eCLIP11.26□□□□□ -0.61
DDR1-273ENST00000513514 ITSN2Q9NZM3 1697 aa11.26□□□□□ -0.61
DDR1-273ENST00000513514 DAPK1P53355 1430 aa11.26□□□□□ -0.61
DDR1-273ENST00000513514 TROQ12816 1431 aaPredicted RBP11.26□□□□□ -0.61
DDR1-273ENST00000513514 ADGRL2O95490 1459 aa11.25□□□□□ -0.61
DDR1-273ENST00000513514 RPRD2Q5VT52 1461 aaKnown RBP11.25□□□□□ -0.61
DDR1-273ENST00000513514 MPHOSPH9Q99550 1183 aa11.25□□□□□ -0.61
DDR1-273ENST00000513514 STRCQ7RTU9 1775 aa11.24□□□□□ -0.61
DDR1-273ENST00000513514 POGZQ7Z3K3 1410 aa11.24□□□□□ -0.61
DDR1-273ENST00000513514 PREX1Q8TCU6 1659 aa11.24□□□□□ -0.61
DDR1-273ENST00000513514 ANKRD30BQ9BXX2 1392 aa11.23□□□□□ -0.61
DDR1-273ENST00000513514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.23□□□□□ -0.61
DDR1-273ENST00000513514 CEBPAP49715 358 aaPredicted RBP11.22□□□□□ -0.61
DDR1-273ENST00000513514 ARHGEF12Q9NZN5 1544 aa11.22□□□□□ -0.61
DDR1-273ENST00000513514 CFAP74Q9C0B2 1584 aa11.21□□□□□ -0.61
DDR1-273ENST00000513514 SHANK2Q9UPX8 1470 aa11.21□□□□□ -0.61
DDR1-273ENST00000513514 ABCC5O15440 1437 aa11.21□□□□□ -0.61
DDR1-273ENST00000513514 RSPH4AQ5TD94 716 aa11.21□□□□□ -0.61
DDR1-273ENST00000513514 TRIM52Q96A61 297 aa11.19□□□□□ -0.62
DDR1-273ENST00000513514 CDK13Q14004 1512 aaKnown RBP11.19□□□□□ -0.62
DDR1-273ENST00000513514 NCOA1Q15788 1441 aa11.18□□□□□ -0.62
DDR1-273ENST00000513514 CNTLNQ9NXG0 1405 aa11.18□□□□□ -0.62
DDR1-273ENST00000513514 ANKRD30AQ9BXX3 1397 aa11.18□□□□□ -0.62
DDR1-273ENST00000513514 ADGBQ8N7X0 1667 aa11.18□□□□□ -0.62
DDR1-273ENST00000513514 LTBP4Q8N2S1 1624 aa11.17□□□□□ -0.62
DDR1-273ENST00000513514 RRP7BPQ9NSQ0 103 aa11.17□□□□□ -0.62
DDR1-273ENST00000513514 POLR1AO95602 1720 aaPredicted RBP11.17□□□□□ -0.62
DDR1-273ENST00000513514 ROCK2O75116 1388 aaKnown RBP11.16□□□□□ -0.62
DDR1-273ENST00000513514 MAGI2Q86UL8 1455 aa11.16□□□□□ -0.62
DDR1-273ENST00000513514 C9orf84Q5VXU9 1444 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms