RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 MRC2Q9UBG0 1479 aa20.38■□□□□ 0.85
DDR1-271ENST00000513240 IQGAP2Q13576 1575 aa20.37■□□□□ 0.85
DDR1-271ENST00000513240 SUPT6HQ7KZ85 1726 aaKnown RBP20.37■□□□□ 0.85
DDR1-271ENST00000513240 UGGT2Q9NYU1 1516 aa20.37■□□□□ 0.85
DDR1-271ENST00000513240 DENND4BO75064 1496 aaPredicted RBP20.36■□□□□ 0.85
DDR1-271ENST00000513240 EIF4G2P78344 907 aaKnown RBP eCLIP20.35■□□□□ 0.858e-8■■■■■ 39.6
DDR1-271ENST00000513240 EHBP1L1Q8N3D4 1523 aa20.35■□□□□ 0.85
DDR1-271ENST00000513240 DEKP35659 375 aaKnown RBP20.34■□□□□ 0.85
DDR1-271ENST00000513240 JPH4Q96JJ6 628 aa20.34■□□□□ 0.85
DDR1-271ENST00000513240 KDM2AQ9Y2K7 1162 aa20.34■□□□□ 0.85
DDR1-271ENST00000513240 PLB1Q6P1J6 1458 aa20.33■□□□□ 0.84
DDR1-271ENST00000513240 CDK11AQ9UQ88 783 aaPredicted RBP20.3■□□□□ 0.84
DDR1-271ENST00000513240 PBRM1Q86U86 1689 aa20.29■□□□□ 0.84
DDR1-271ENST00000513240 NEFLP07196 543 aa20.29■□□□□ 0.84
DDR1-271ENST00000513240 ADAMTS12P58397 1594 aa20.28■□□□□ 0.84
DDR1-271ENST00000513240 HNRNPMP52272 730 aaKnown RBP eCLIP20.28■□□□□ 0.84
DDR1-271ENST00000513240 SALL2Q9Y467 1007 aaPredicted RBP20.28■□□□□ 0.84
DDR1-271ENST00000513240 ABCC5O15440 1437 aa20.27■□□□□ 0.84
DDR1-271ENST00000513240 PKD2Q13563 968 aa20.27■□□□□ 0.84
DDR1-271ENST00000513240 DISP1Q96F81 1524 aa20.27■□□□□ 0.84
DDR1-271ENST00000513240 CCER2I3L3R5 266 aa20.26■□□□□ 0.83
DDR1-271ENST00000513240 NUP153P49790 1475 aaKnown RBP20.26■□□□□ 0.83
DDR1-271ENST00000513240 CCDC136Q96JN2 1154 aa20.26■□□□□ 0.83
DDR1-271ENST00000513240 HECW1Q76N89 1606 aa20.24■□□□□ 0.83
DDR1-271ENST00000513240 DAPK1P53355 1430 aa20.24■□□□□ 0.83
DDR1-271ENST00000513240 KDM5BQ9UGL1 1544 aa20.24■□□□□ 0.83
DDR1-271ENST00000513240 WDR62O43379 1518 aa20.23■□□□□ 0.83
DDR1-271ENST00000513240 ARHGEF11O15085 1522 aa20.21■□□□□ 0.83
DDR1-271ENST00000513240 MRS2Q9HD23 443 aa20.21■□□□□ 0.83
DDR1-271ENST00000513240 IFT140Q96RY7 1462 aa20.21■□□□□ 0.83
DDR1-271ENST00000513240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.83
DDR1-271ENST00000513240 PLEKHD1A6NEE1 506 aa20.2■□□□□ 0.83
DDR1-271ENST00000513240 GRIN2AQ12879 1464 aa20.2■□□□□ 0.82
DDR1-271ENST00000513240 KIAA0586Q9BVV6 1533 aa20.2■□□□□ 0.82
DDR1-271ENST00000513240 ANKRD30BQ9BXX2 1392 aa20.18■□□□□ 0.82
DDR1-271ENST00000513240 TCOF1Q13428 1488 aaKnown RBP20.17■□□□□ 0.82
DDR1-271ENST00000513240 RGL3Q3MIN7 710 aa20.17■□□□□ 0.82
DDR1-271ENST00000513240 KIF7Q2M1P5 1343 aa20.16■□□□□ 0.82
DDR1-271ENST00000513240 FANCIQ9NVI1 1328 aa20.16■□□□□ 0.82
DDR1-271ENST00000513240 MIA2Q96PC5 1412 aa20.15■□□□□ 0.82
DDR1-271ENST00000513240 PRKRIP1Q9H875 184 aaPredicted RBP20.13■□□□□ 0.81
DDR1-271ENST00000513240 KIAA0556O60303 1618 aa20.12■□□□□ 0.81
DDR1-271ENST00000513240 EIF4G3O43432 1585 aaKnown RBP20.12■□□□□ 0.81
DDR1-271ENST00000513240 CCDC7Q96M83 1385 aa20.11■□□□□ 0.81
DDR1-271ENST00000513240 NUP155O75694 1391 aa20.1■□□□□ 0.81
DDR1-271ENST00000513240 DCAF11Q8TEB1 546 aa20.09■□□□□ 0.81
DDR1-271ENST00000513240 TSPY4P0CV99 314 aa20.09■□□□□ 0.81
DDR1-271ENST00000513240 TSPY10P0CW01 314 aa20.09■□□□□ 0.81
DDR1-271ENST00000513240 NBR1Q14596 966 aa20.08■□□□□ 0.81
DDR1-271ENST00000513240 MYT1LQ9UL68 1186 aa20.08■□□□□ 0.81
DDR1-271ENST00000513240 TROQ12816 1431 aaPredicted RBP20.07■□□□□ 0.8
DDR1-271ENST00000513240 GPATCH8Q9UKJ3 1502 aaKnown RBP20.07■□□□□ 0.8
DDR1-271ENST00000513240 KIF14Q15058 1648 aa20.07■□□□□ 0.8
DDR1-271ENST00000513240 CAMSAP2Q08AD1 1489 aa20.07■□□□□ 0.8
DDR1-271ENST00000513240 CEP170Q5SW79 1584 aa20.07■□□□□ 0.8
DDR1-271ENST00000513240 NCOA1Q15788 1441 aa20.06■□□□□ 0.8
DDR1-271ENST00000513240 RAPGEF6Q8TEU7 1601 aa20.05■□□□□ 0.8
DDR1-271ENST00000513240 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.05■□□□□ 0.8
DDR1-271ENST00000513240 AKNAQ7Z591 1439 aa20.04■□□□□ 0.8
DDR1-271ENST00000513240 CARD11Q9BXL7 1154 aa20.04■□□□□ 0.8
DDR1-271ENST00000513240 RTN4Q9NQC3 1192 aaKnown RBP20.03■□□□□ 0.8
DDR1-271ENST00000513240 RPRD2Q5VT52 1461 aaKnown RBP20.01■□□□□ 0.79
DDR1-271ENST00000513240 B4GALNT3Q6L9W6 998 aa20.01■□□□□ 0.79
DDR1-271ENST00000513240 CARMIL2Q6F5E8 1435 aa20.01■□□□□ 0.79
DDR1-271ENST00000513240 CNTLNQ9NXG0 1405 aa20.01■□□□□ 0.79
DDR1-271ENST00000513240 ST20-MTHFSA0A0A6YYL1 179 aa20.01■□□□□ 0.79
DDR1-271ENST00000513240 PZPP20742 1482 aa20.01■□□□□ 0.79
DDR1-271ENST00000513240 SYNJ2O15056 1496 aa20■□□□□ 0.79
DDR1-271ENST00000513240 ROCK1Q13464 1354 aa19.99■□□□□ 0.79
DDR1-271ENST00000513240 ANKRD50Q9ULJ7 1429 aa19.99■□□□□ 0.79
DDR1-271ENST00000513240 ANKRD30AQ9BXX3 1397 aa19.99■□□□□ 0.79
DDR1-271ENST00000513240 GCC2Q8IWJ2 1684 aa19.98■□□□□ 0.79
DDR1-271ENST00000513240 ATP10BO94823 1461 aa19.98■□□□□ 0.79
DDR1-271ENST00000513240 USP47Q96K76 1375 aa19.98■□□□□ 0.79
DDR1-271ENST00000513240 IL27Q8NEV9 243 aa19.97■□□□□ 0.79
DDR1-271ENST00000513240 TEX14Q8IWB6 1497 aa19.96■□□□□ 0.79
DDR1-271ENST00000513240 NBPF1Q3BBV0 1214 aa19.96■□□□□ 0.79
DDR1-271ENST00000513240 PTPRGP23470 1445 aa19.95■□□□□ 0.78
DDR1-271ENST00000513240 DNMT1P26358 1616 aaKnown RBP19.94■□□□□ 0.78
DDR1-271ENST00000513240 UBE2Q2Q8WVN8 375 aa19.92■□□□□ 0.78
DDR1-271ENST00000513240 KIF15Q9NS87 1388 aa19.92■□□□□ 0.78
DDR1-271ENST00000513240 KIAA1107Q9UPP5 1409 aa19.92■□□□□ 0.78
DDR1-271ENST00000513240 ERICH6BQ5W0A0 696 aa19.91■□□□□ 0.78
DDR1-271ENST00000513240 C9orf84Q5VXU9 1444 aa19.91■□□□□ 0.78
DDR1-271ENST00000513240 MAGI1Q96QZ7 1491 aaPredicted RBP19.91■□□□□ 0.78
DDR1-271ENST00000513240 SPATA31E1Q6ZUB1 1445 aa19.88■□□□□ 0.77
DDR1-271ENST00000513240 TMC1Q8TDI8 760 aa19.88■□□□□ 0.77
DDR1-271ENST00000513240 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
DDR1-271ENST00000513240 PAK3O75914 559 aaPredicted RBP19.85■□□□□ 0.77
DDR1-271ENST00000513240 NUP160Q12769 1436 aa19.85■□□□□ 0.77
DDR1-271ENST00000513240 CC2D1BQ5T0F9 858 aaKnown RBP19.85■□□□□ 0.77
DDR1-271ENST00000513240 NOP58Q9Y2X3 529 aaKnown RBP19.82■□□□□ 0.76
DDR1-271ENST00000513240 ROCK2O75116 1388 aaKnown RBP19.8■□□□□ 0.76
DDR1-271ENST00000513240 DHX29Q7Z478 1369 aaKnown RBP19.8■□□□□ 0.76
DDR1-271ENST00000513240 AFAP1Q8N556 730 aa19.79■□□□□ 0.76
DDR1-271ENST00000513240 ABCC10Q5T3U5 1492 aa19.77■□□□□ 0.76
DDR1-271ENST00000513240 BCORL1Q5H9F3 1711 aa19.77■□□□□ 0.76
DDR1-271ENST00000513240 ERCC6L2Q5T890 1561 aa19.76■□□□□ 0.75
DDR1-271ENST00000513240 ZBED9Q6R2W3 1325 aa19.76■□□□□ 0.75
DDR1-271ENST00000513240 PNISRQ8TF01 805 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms