RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 ARID3CA6NKF2 412 aa21.45■■□□□ 1.02
SDHA-215ENST00000512962 ATP10BO94823 1461 aa21.43■■□□□ 1.02
SDHA-215ENST00000512962 RIMS1Q86UR5 1692 aaKnown RBP21.43■■□□□ 1.02
SDHA-215ENST00000512962 MKRN4PQ13434 485 aaPredicted RBP21.42■■□□□ 1.02
SDHA-215ENST00000512962 RAPGEF3O95398 923 aa21.41■■□□□ 1.02
SDHA-215ENST00000512962 SIGLEC1Q9BZZ2 1709 aa21.41■■□□□ 1.02
SDHA-215ENST00000512962 POTEDQ86YR6 584 aa21.4■■□□□ 1.02
SDHA-215ENST00000512962 CAPN15O75808 1086 aa21.37■■□□□ 1.01
SDHA-215ENST00000512962 ARHGEF40Q8TER5 1519 aa21.35■■□□□ 1.01
SDHA-215ENST00000512962 C1QBPQ07021 282 aaKnown RBP21.35■■□□□ 1.01
SDHA-215ENST00000512962 RICTORQ6R327 1708 aa21.34■■□□□ 1.01
SDHA-215ENST00000512962 NEO1Q92859 1461 aa21.33■■□□□ 1.01
SDHA-215ENST00000512962 PRXQ9BXM0 1461 aa21.33■■□□□ 1.01
SDHA-215ENST00000512962 POLA2Q14181 598 aa21.32■■□□□ 1
SDHA-215ENST00000512962 HSPA2P54652 639 aa21.31■■□□□ 1
SDHA-215ENST00000512962 RAPGEF6Q8TEU7 1601 aa21.3■■□□□ 1
SDHA-215ENST00000512962 SPDYE4A6NLX3 237 aa21.3■■□□□ 1
SDHA-215ENST00000512962 P3H3Q8IVL6 736 aa21.3■■□□□ 1
SDHA-215ENST00000512962 SAMD9Q5K651 1589 aa21.3■■□□□ 1
SDHA-215ENST00000512962 PHLDB1Q86UU1 1377 aa21.28■■□□□ 1
SDHA-215ENST00000512962 ARID4BQ4LE39 1312 aaPredicted RBP21.26■□□□□ 0.99
SDHA-215ENST00000512962 NUP153P49790 1475 aaKnown RBP21.23■□□□□ 0.99
SDHA-215ENST00000512962 FER1L4A9Z1Z3 1794 aa21.2■□□□□ 0.98
SDHA-215ENST00000512962 YEATS2Q9ULM3 1422 aa21.19■□□□□ 0.98
SDHA-215ENST00000512962 ZMYM4Q5VZL5 1548 aa21.19■□□□□ 0.98
SDHA-215ENST00000512962 TTC37Q6PGP7 1564 aa21.19■□□□□ 0.98
SDHA-215ENST00000512962 ILDR2Q71H61 639 aa21.18■□□□□ 0.98
SDHA-215ENST00000512962 DENND4BO75064 1496 aaPredicted RBP21.18■□□□□ 0.98
SDHA-215ENST00000512962 FHOD3Q2V2M9 1422 aa21.16■□□□□ 0.98
SDHA-215ENST00000512962 CERKQ8TCT0 537 aa21.16■□□□□ 0.98
SDHA-215ENST00000512962 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.15■□□□□ 0.98
SDHA-215ENST00000512962 ZFYVE16Q7Z3T8 1539 aa21.14■□□□□ 0.98
SDHA-215ENST00000512962 AKNAQ7Z591 1439 aa21.14■□□□□ 0.98
SDHA-215ENST00000512962 FANCAO15360 1455 aa21.13■□□□□ 0.97
SDHA-215ENST00000512962 HECW1Q76N89 1606 aa21.12■□□□□ 0.97
SDHA-215ENST00000512962 CFAP74Q9C0B2 1584 aa21.12■□□□□ 0.97
SDHA-215ENST00000512962 STRCQ7RTU9 1775 aa21.11■□□□□ 0.97
SDHA-215ENST00000512962 PREX1Q8TCU6 1659 aa21.1■□□□□ 0.97
SDHA-215ENST00000512962 EFCAB5A4FU69 1503 aa21.09■□□□□ 0.97
SDHA-215ENST00000512962 PROM2Q8N271 834 aa21.09■□□□□ 0.97
SDHA-215ENST00000512962 ABCB7O75027 752 aa21.08■□□□□ 0.97
SDHA-215ENST00000512962 ARHGEF12Q9NZN5 1544 aa21.06■□□□□ 0.96
SDHA-215ENST00000512962 FBXO3Q9UK99 471 aa21.06■□□□□ 0.96
SDHA-215ENST00000512962 MLECQ14165 292 aa21.05■□□□□ 0.96
SDHA-215ENST00000512962 DISP3Q9P2K9 1392 aa21.05■□□□□ 0.96
SDHA-215ENST00000512962 POGZQ7Z3K3 1410 aa21.04■□□□□ 0.96
SDHA-215ENST00000512962 SPATA31D1Q6ZQQ2 1576 aa21.01■□□□□ 0.95
SDHA-215ENST00000512962 CDK13Q14004 1512 aaKnown RBP21■□□□□ 0.95
SDHA-215ENST00000512962 MAGI2Q86UL8 1455 aa21■□□□□ 0.95
SDHA-215ENST00000512962 SOCS7O14512 581 aa20.99■□□□□ 0.95
SDHA-215ENST00000512962 RANGAP1P46060 587 aaPredicted RBP20.99■□□□□ 0.95
SDHA-215ENST00000512962 ZBTB12Q9Y330 459 aaPredicted RBP20.99■□□□□ 0.95
SDHA-215ENST00000512962 CEBPAP49715 358 aaPredicted RBP20.98■□□□□ 0.95
SDHA-215ENST00000512962 SCAPERQ9BY12 1400 aa20.95■□□□□ 0.95
SDHA-215ENST00000512962 FAM9AQ8IZU1 332 aaPredicted RBP20.95■□□□□ 0.94
SDHA-215ENST00000512962 PLEKHD1A6NEE1 506 aa20.94■□□□□ 0.94
SDHA-215ENST00000512962 C9orf84Q5VXU9 1444 aa20.93■□□□□ 0.94
SDHA-215ENST00000512962 ATP10AO60312 1499 aa20.93■□□□□ 0.94
SDHA-215ENST00000512962 MYO5CQ9NQX4 1742 aa20.92■□□□□ 0.94
SDHA-215ENST00000512962 C3P01024 1663 aa20.9■□□□□ 0.94
SDHA-215ENST00000512962 KIF14Q15058 1648 aa20.9■□□□□ 0.94
SDHA-215ENST00000512962 PLCH2O75038 1416 aa20.9■□□□□ 0.94
SDHA-215ENST00000512962 LTBP4Q8N2S1 1624 aa20.89■□□□□ 0.93
SDHA-215ENST00000512962 DIP2CQ9Y2E4 1556 aa20.88■□□□□ 0.93
SDHA-215ENST00000512962 SLC24A1O60721 1099 aa20.87■□□□□ 0.93
SDHA-215ENST00000512962 ABCA6Q8N139 1617 aa20.86■□□□□ 0.93
SDHA-215ENST00000512962 KDM5CP41229 1560 aa20.86■□□□□ 0.93
SDHA-215ENST00000512962 DSG3P32926 999 aa20.84■□□□□ 0.93
SDHA-215ENST00000512962 UHRF1BP1Q6BDS2 1440 aa20.84■□□□□ 0.93
SDHA-215ENST00000512962 LRRIQ1Q96JM4 1722 aa20.82■□□□□ 0.92
SDHA-215ENST00000512962 SETD1BQ9UPS6 1966 aaKnown RBP20.81■□□□□ 0.92
SDHA-215ENST00000512962 VASPP50552 380 aaPredicted RBP20.8■□□□□ 0.92
SDHA-215ENST00000512962 PTPRTO14522 1441 aa20.79■□□□□ 0.92
SDHA-215ENST00000512962 REREQ9P2R6 1566 aa20.79■□□□□ 0.92
SDHA-215ENST00000512962 ZNF518AQ6AHZ1 1483 aa20.78■□□□□ 0.92
SDHA-215ENST00000512962 CDC42BPBQ9Y5S2 1711 aa20.78■□□□□ 0.92
SDHA-215ENST00000512962 AFAP1Q8N556 730 aa20.76■□□□□ 0.91
SDHA-215ENST00000512962 ARHGAP5Q13017 1502 aa20.74■□□□□ 0.91
SDHA-215ENST00000512962 NCOA1Q15788 1441 aa20.73■□□□□ 0.91
SDHA-215ENST00000512962 EFCAB2Q5VUJ9 269 aa20.72■□□□□ 0.91
SDHA-215ENST00000512962 ITSN2Q9NZM3 1697 aa20.71■□□□□ 0.91
SDHA-215ENST00000512962 IQSEC2Q5JU85 1478 aa20.7■□□□□ 0.9
SDHA-215ENST00000512962 KIDINS220Q9ULH0 1771 aa20.7■□□□□ 0.9
SDHA-215ENST00000512962 ABCC1P33527 1531 aa20.69■□□□□ 0.9
SDHA-215ENST00000512962 AGLP35573 1532 aa20.69■□□□□ 0.9
SDHA-215ENST00000512962 TRAPPC8Q9Y2L5 1435 aa20.69■□□□□ 0.9
SDHA-215ENST00000512962 CAMSAP1Q5T5Y3 1602 aa20.68■□□□□ 0.9
SDHA-215ENST00000512962 PREX2Q70Z35 1606 aa20.68■□□□□ 0.9
SDHA-215ENST00000512962 MLH3Q9UHC1 1453 aa20.68■□□□□ 0.9
SDHA-215ENST00000512962 EEA1Q15075 1411 aa20.67■□□□□ 0.9
SDHA-215ENST00000512962 TROQ12816 1431 aaPredicted RBP20.66■□□□□ 0.9
SDHA-215ENST00000512962 ARHGAP35Q9NRY4 1499 aa20.66■□□□□ 0.9
SDHA-215ENST00000512962 MROH2AA6NES4 1674 aa20.64■□□□□ 0.89
SDHA-215ENST00000512962 ATP1B4Q9UN42 357 aaPredicted RBP20.62■□□□□ 0.89
SDHA-215ENST00000512962 CDC42BPAQ5VT25 1732 aa20.61■□□□□ 0.89
SDHA-215ENST00000512962 MYO3AQ8NEV4 1616 aa20.61■□□□□ 0.89
SDHA-215ENST00000512962 ZNF142P52746 1687 aaPredicted RBP20.61■□□□□ 0.89
SDHA-215ENST00000512962 ZNF335Q9H4Z2 1342 aaPredicted RBP20.6■□□□□ 0.89
SDHA-215ENST00000512962 IFNLR1Q8IU57 520 aaPredicted RBP20.6■□□□□ 0.89
SDHA-215ENST00000512962 MYT1LQ9UL68 1186 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms