RNA–Protein interactions for RNA: ENST00000512713.5

YIPF3-216, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 306 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-216ENST00000512713 PTPRMP28827 1452 aa14.73□□□□□ -0.05
YIPF3-216ENST00000512713 ZFYVE16Q7Z3T8 1539 aa14.72□□□□□ -0.05
YIPF3-216ENST00000512713 MLECQ14165 292 aa14.72□□□□□ -0.05
YIPF3-216ENST00000512713 ZMYM4Q5VZL5 1548 aa14.71□□□□□ -0.05
YIPF3-216ENST00000512713 ZNF518AQ6AHZ1 1483 aa14.71□□□□□ -0.05
YIPF3-216ENST00000512713 ARHGEF40Q8TER5 1519 aa14.71□□□□□ -0.06
YIPF3-216ENST00000512713 PCF11O94913 1555 aaKnown RBP14.7□□□□□ -0.06
YIPF3-216ENST00000512713 ZNF777Q9ULD5 760 aaPredicted RBP14.7□□□□□ -0.06
YIPF3-216ENST00000512713 ATP10AO60312 1499 aa14.69□□□□□ -0.06
YIPF3-216ENST00000512713 MTUS2Q5JR59 1369 aa14.68□□□□□ -0.06
YIPF3-216ENST00000512713 HECW2Q9P2P5 1572 aa14.68□□□□□ -0.06
YIPF3-216ENST00000512713 PLPPR3Q6T4P5 718 aa14.67□□□□□ -0.06
YIPF3-216ENST00000512713 CFDP1Q9UEE9 299 aaPredicted RBP14.67□□□□□ -0.06
YIPF3-216ENST00000512713 CEP162Q5TB80 1403 aa14.66□□□□□ -0.06
YIPF3-216ENST00000512713 C9orf84Q5VXU9 1444 aa14.66□□□□□ -0.06
YIPF3-216ENST00000512713 RICTORQ6R327 1708 aa14.66□□□□□ -0.06
YIPF3-216ENST00000512713 CCNB3Q8WWL7 1395 aa14.65□□□□□ -0.06
YIPF3-216ENST00000512713 ADAMTSL3P82987 1691 aa14.65□□□□□ -0.06
YIPF3-216ENST00000512713 LOC105371045A0A1W2PR82 267 aa14.63□□□□□ -0.07
YIPF3-216ENST00000512713 ESF1Q9H501 851 aaKnown RBP14.63□□□□□ -0.07
YIPF3-216ENST00000512713 TRAPPC8Q9Y2L5 1435 aa14.63□□□□□ -0.07
YIPF3-216ENST00000512713 MYO5CQ9NQX4 1742 aa14.63□□□□□ -0.07
YIPF3-216ENST00000512713 HNRNPMP52272 730 aaKnown RBP eCLIP14.62□□□□□ -0.07
YIPF3-216ENST00000512713 BCORL1Q5H9F3 1711 aa14.62□□□□□ -0.07
YIPF3-216ENST00000512713 MLH3Q9UHC1 1453 aa14.62□□□□□ -0.07
YIPF3-216ENST00000512713 SPAG9O60271 1321 aaKnown RBP14.62□□□□□ -0.07
YIPF3-216ENST00000512713 GPATCH8Q9UKJ3 1502 aaKnown RBP14.61□□□□□ -0.07
YIPF3-216ENST00000512713 MADDQ8WXG6 1647 aa14.6□□□□□ -0.07
YIPF3-216ENST00000512713 ARHGEF12Q9NZN5 1544 aa14.59□□□□□ -0.07
YIPF3-216ENST00000512713 KDM5CP41229 1560 aa14.59□□□□□ -0.07
YIPF3-216ENST00000512713 KIAA1107Q9UPP5 1409 aa14.58□□□□□ -0.07
YIPF3-216ENST00000512713 PLEKHH2Q8IVE3 1493 aa14.58□□□□□ -0.08
YIPF3-216ENST00000512713 ABCC1P33527 1531 aa14.57□□□□□ -0.08
YIPF3-216ENST00000512713 CEBPAP49715 358 aaPredicted RBP14.57□□□□□ -0.08
YIPF3-216ENST00000512713 PREX2Q70Z35 1606 aa14.56□□□□□ -0.08
YIPF3-216ENST00000512713 LRRIQ1Q96JM4 1722 aa14.56□□□□□ -0.08
YIPF3-216ENST00000512713 HSPA2P54652 639 aa14.56□□□□□ -0.08
YIPF3-216ENST00000512713 ILDR1Q86SU0 546 aaPredicted RBP14.56□□□□□ -0.08
YIPF3-216ENST00000512713 LMTK3Q96Q04 1460 aa14.55□□□□□ -0.08
YIPF3-216ENST00000512713 ZNF644Q9H582 1327 aaPredicted RBP14.54□□□□□ -0.08
YIPF3-216ENST00000512713 CDC42BPBQ9Y5S2 1711 aa14.52□□□□□ -0.09
YIPF3-216ENST00000512713 RIMS1Q86UR5 1692 aaKnown RBP14.52□□□□□ -0.09
YIPF3-216ENST00000512713 DIP2CQ9Y2E4 1556 aa14.51□□□□□ -0.09
YIPF3-216ENST00000512713 EHBP1L1Q8N3D4 1523 aa14.51□□□□□ -0.09
YIPF3-216ENST00000512713 SYCP2Q9BX26 1530 aa14.51□□□□□ -0.09
YIPF3-216ENST00000512713 RSPH4AQ5TD94 716 aa14.51□□□□□ -0.09
YIPF3-216ENST00000512713 REREQ9P2R6 1566 aa14.51□□□□□ -0.09
YIPF3-216ENST00000512713 AGLP35573 1532 aa14.51□□□□□ -0.09
YIPF3-216ENST00000512713 VPS8Q8N3P4 1428 aa14.5□□□□□ -0.09
YIPF3-216ENST00000512713 SAMD9LQ8IVG5 1584 aa14.49□□□□□ -0.09
YIPF3-216ENST00000512713 SIGLEC1Q9BZZ2 1709 aa14.49□□□□□ -0.09
YIPF3-216ENST00000512713 CNTLNQ9NXG0 1405 aa14.49□□□□□ -0.09
YIPF3-216ENST00000512713 APLP2Q06481 763 aa14.48□□□□□ -0.09
YIPF3-216ENST00000512713 NCOA2Q15596 1464 aa14.47□□□□□ -0.09
YIPF3-216ENST00000512713 GGT6Q6P531 493 aa14.47□□□□□ -0.09
YIPF3-216ENST00000512713 DMRT2Q9Y5R5 561 aa14.47□□□□□ -0.09
YIPF3-216ENST00000512713 ABCA6Q8N139 1617 aa14.47□□□□□ -0.09
YIPF3-216ENST00000512713 TSPY4P0CV99 314 aa14.46□□□□□ -0.09
YIPF3-216ENST00000512713 TSPY10P0CW01 314 aa14.46□□□□□ -0.09
YIPF3-216ENST00000512713 PPP6R1Q9UPN7 881 aa14.46□□□□□ -0.09
YIPF3-216ENST00000512713 UHRF1BP1Q6BDS2 1440 aa14.46□□□□□ -0.09
YIPF3-216ENST00000512713 CDC42BPAQ5VT25 1732 aa14.46□□□□□ -0.1
YIPF3-216ENST00000512713 ITSN2Q9NZM3 1697 aa14.46□□□□□ -0.1
YIPF3-216ENST00000512713 A2MP01023 1474 aa14.45□□□□□ -0.1
YIPF3-216ENST00000512713 ATP7AQ04656 1500 aa14.45□□□□□ -0.1
YIPF3-216ENST00000512713 MBD5Q9P267 1494 aa14.44□□□□□ -0.1
YIPF3-216ENST00000512713 RTEL1-TNFRSF6BF6WH68 1400 aa14.44□□□□□ -0.1
YIPF3-216ENST00000512713 FBXO41Q8TF61 875 aa14.44□□□□□ -0.1
YIPF3-216ENST00000512713 TIAM1Q13009 1591 aa14.43□□□□□ -0.1
YIPF3-216ENST00000512713 KANK4Q5T7N3 995 aaPredicted RBP14.43□□□□□ -0.1
YIPF3-216ENST00000512713 ZMYM3Q14202 1370 aa14.43□□□□□ -0.1
YIPF3-216ENST00000512713 LRRC9Q6ZRR7 1453 aa14.43□□□□□ -0.1
YIPF3-216ENST00000512713 FER1L4A9Z1Z3 1794 aa14.42□□□□□ -0.1
YIPF3-216ENST00000512713 DHX29Q7Z478 1369 aaKnown RBP14.42□□□□□ -0.1
YIPF3-216ENST00000512713 KIDINS220Q9ULH0 1771 aa14.42□□□□□ -0.1
YIPF3-216ENST00000512713 CCDC141Q6ZP82 1450 aa14.4□□□□□ -0.1
YIPF3-216ENST00000512713 KIF3BO15066 747 aa14.4□□□□□ -0.1
YIPF3-216ENST00000512713 CAMSAP2Q08AD1 1489 aa14.39□□□□□ -0.11
YIPF3-216ENST00000512713 MAP3K1Q13233 1512 aa14.39□□□□□ -0.11
YIPF3-216ENST00000512713 NPATQ14207 1427 aa14.39□□□□□ -0.11
YIPF3-216ENST00000512713 INO80Q9ULG1 1556 aaPredicted RBP14.38□□□□□ -0.11
YIPF3-216ENST00000512713 SUPT6HQ7KZ85 1726 aaKnown RBP14.37□□□□□ -0.11
YIPF3-216ENST00000512713 CERKQ8TCT0 537 aa14.36□□□□□ -0.11
YIPF3-216ENST00000512713 WASHC2CQ9Y4E1 1318 aa14.36□□□□□ -0.11
YIPF3-216ENST00000512713 MIA2Q96PC5 1412 aa14.35□□□□□ -0.11
YIPF3-216ENST00000512713 PLXNC1O60486 1568 aa14.34□□□□□ -0.11
YIPF3-216ENST00000512713 MYOM3Q5VTT5 1437 aa14.34□□□□□ -0.11
YIPF3-216ENST00000512713 PREX1Q8TCU6 1659 aa14.32□□□□□ -0.12
YIPF3-216ENST00000512713 PTPRKQ15262 1439 aa14.32□□□□□ -0.12
YIPF3-216ENST00000512713 PTPRTO14522 1441 aa14.3□□□□□ -0.12
YIPF3-216ENST00000512713 PKD2Q13563 968 aa14.29□□□□□ -0.12
YIPF3-216ENST00000512713 FBXO31Q5XUX0 539 aaPredicted RBP14.29□□□□□ -0.12
YIPF3-216ENST00000512713 ARHGEF5Q12774 1597 aa14.29□□□□□ -0.12
YIPF3-216ENST00000512713 C3P01024 1663 aa14.29□□□□□ -0.12
YIPF3-216ENST00000512713 NCOA1Q15788 1441 aa14.28□□□□□ -0.12
YIPF3-216ENST00000512713 ADGBQ8N7X0 1667 aa14.27□□□□□ -0.12
YIPF3-216ENST00000512713 NCKAP5LQ9HCH0 1330 aa14.27□□□□□ -0.12
YIPF3-216ENST00000512713 SETD1BQ9UPS6 1966 aaKnown RBP14.27□□□□□ -0.13
YIPF3-216ENST00000512713 TNRQ92752 1358 aa14.26□□□□□ -0.13
YIPF3-216ENST00000512713 RRP7BPQ9NSQ0 103 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms