RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 CCDC136Q96JN2 1154 aa16.14■□□□□ 0.17
PRDM16-207ENST00000512462 DAXXQ9UER7 740 aaPredicted RBP16.13■□□□□ 0.17
PRDM16-207ENST00000512462 IFT140Q96RY7 1462 aa16.13■□□□□ 0.17
PRDM16-207ENST00000512462 GRIN2BQ13224 1484 aa16.13■□□□□ 0.17
PRDM16-207ENST00000512462 NUP155O75694 1391 aa16.12■□□□□ 0.17
PRDM16-207ENST00000512462 LRRIQ1Q96JM4 1722 aa16.11■□□□□ 0.17
PRDM16-207ENST00000512462 TNNT2P45379 298 aaPredicted RBP16.11■□□□□ 0.17
PRDM16-207ENST00000512462 CCDC18Q5T9S5 1454 aa16.11■□□□□ 0.17
PRDM16-207ENST00000512462 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
PRDM16-207ENST00000512462 FGD6Q6ZV73 1430 aa16.1■□□□□ 0.17
PRDM16-207ENST00000512462 IQGAP2Q13576 1575 aa16.08■□□□□ 0.17
PRDM16-207ENST00000512462 THOC2Q8NI27 1593 aaKnown RBP16.08■□□□□ 0.17
PRDM16-207ENST00000512462 CANXP27824 592 aaKnown RBP16.08■□□□□ 0.17
PRDM16-207ENST00000512462 STAG3Q9UJ98 1225 aa16.06■□□□□ 0.16
PRDM16-207ENST00000512462 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.05■□□□□ 0.16
PRDM16-207ENST00000512462 NEUROD2Q15784 382 aa16.05■□□□□ 0.16
PRDM16-207ENST00000512462 TIMELESSQ9UNS1 1208 aa16.05■□□□□ 0.16
PRDM16-207ENST00000512462 SAFB2Q14151 953 aaKnown RBP eCLIP16.04■□□□□ 0.16
PRDM16-207ENST00000512462 PLEKHG5O94827 1062 aa16.03■□□□□ 0.16
PRDM16-207ENST00000512462 NBR1Q14596 966 aa16.03■□□□□ 0.16
PRDM16-207ENST00000512462 NCOA2Q15596 1464 aa16.02■□□□□ 0.16
PRDM16-207ENST00000512462 EIF4G3O43432 1585 aaKnown RBP16.02■□□□□ 0.16
PRDM16-207ENST00000512462 SLC24A1O60721 1099 aa16.01■□□□□ 0.15
PRDM16-207ENST00000512462 NUTM2DQ5VT03 806 aaPredicted RBP16.01■□□□□ 0.15
PRDM16-207ENST00000512462 UGGT2Q9NYU1 1516 aa16■□□□□ 0.15
PRDM16-207ENST00000512462 WDR43Q15061 677 aaKnown RBP eCLIP16■□□□□ 0.15
PRDM16-207ENST00000512462 MAPKBP1O60336 1514 aa16■□□□□ 0.15
PRDM16-207ENST00000512462 EHBP1L1Q8N3D4 1523 aa16■□□□□ 0.15
PRDM16-207ENST00000512462 GGT6Q6P531 493 aa16■□□□□ 0.15
PRDM16-207ENST00000512462 ST20-MTHFSA0A0A6YYL1 179 aa15.99■□□□□ 0.15
PRDM16-207ENST00000512462 CARMIL2Q6F5E8 1435 aa15.99■□□□□ 0.15
PRDM16-207ENST00000512462 MYOM3Q5VTT5 1437 aa15.99■□□□□ 0.15
PRDM16-207ENST00000512462 HECW1Q76N89 1606 aa15.98■□□□□ 0.15
PRDM16-207ENST00000512462 SUPT6HQ7KZ85 1726 aaKnown RBP15.98■□□□□ 0.15
PRDM16-207ENST00000512462 ANO8Q9HCE9 1232 aaPredicted RBP15.98■□□□□ 0.15
PRDM16-207ENST00000512462 CCER2I3L3R5 266 aa15.97■□□□□ 0.15
PRDM16-207ENST00000512462 MAGI3Q5TCQ9 1506 aa15.97■□□□□ 0.15
PRDM16-207ENST00000512462 RTL5Q5HYW3 569 aaPredicted RBP15.97■□□□□ 0.15
PRDM16-207ENST00000512462 CCDC184Q52MB2 194 aa15.96■□□□□ 0.15
PRDM16-207ENST00000512462 KIAA0586Q9BVV6 1533 aa15.96■□□□□ 0.15
PRDM16-207ENST00000512462 GRIN2AQ12879 1464 aa15.96■□□□□ 0.15
PRDM16-207ENST00000512462 TSHZ2Q9NRE2 1034 aa15.96■□□□□ 0.15
PRDM16-207ENST00000512462 ARHGEF11O15085 1522 aa15.95■□□□□ 0.14
PRDM16-207ENST00000512462 MLECQ14165 292 aa15.94■□□□□ 0.14
PRDM16-207ENST00000512462 NBPF8Q3BBV2 869 aa15.94■□□□□ 0.14
PRDM16-207ENST00000512462 EPRSP07814 1512 aaKnown RBP15.94■□□□□ 0.14
PRDM16-207ENST00000512462 ANKRD30AQ9BXX3 1397 aa15.94■□□□□ 0.14
PRDM16-207ENST00000512462 WASHC2AQ641Q2 1341 aa15.93■□□□□ 0.14
PRDM16-207ENST00000512462 CDK13Q14004 1512 aaKnown RBP15.93■□□□□ 0.14
PRDM16-207ENST00000512462 KNSTRNQ9Y448 316 aa15.93■□□□□ 0.14
PRDM16-207ENST00000512462 KIAA0556O60303 1618 aa15.92■□□□□ 0.14
PRDM16-207ENST00000512462 DISP1Q96F81 1524 aa15.92■□□□□ 0.14
PRDM16-207ENST00000512462 MAGI1Q96QZ7 1491 aaPredicted RBP15.92■□□□□ 0.14
PRDM16-207ENST00000512462 PRG4Q92954 1404 aaPredicted RBP15.91■□□□□ 0.14
PRDM16-207ENST00000512462 KIF3BO15066 747 aa15.91■□□□□ 0.14
PRDM16-207ENST00000512462 ANP32AP39687 249 aaKnown RBP15.91■□□□□ 0.14
PRDM16-207ENST00000512462 PTPRKQ15262 1439 aa15.91■□□□□ 0.14
PRDM16-207ENST00000512462 PPM1GO15355 546 aaPredicted RBP15.91■□□□□ 0.14
PRDM16-207ENST00000512462 ROCK2O75116 1388 aaKnown RBP15.91■□□□□ 0.14
PRDM16-207ENST00000512462 PRKRIP1Q9H875 184 aaPredicted RBP15.91■□□□□ 0.14
PRDM16-207ENST00000512462 ESF1Q9H501 851 aaKnown RBP15.89■□□□□ 0.13
PRDM16-207ENST00000512462 PTPN23Q9H3S7 1636 aa15.89■□□□□ 0.13
PRDM16-207ENST00000512462 RBM19Q9Y4C8 960 aaKnown RBP15.89■□□□□ 0.13
PRDM16-207ENST00000512462 UACAQ9BZF9 1416 aa15.89■□□□□ 0.13
PRDM16-207ENST00000512462 PTPRGP23470 1445 aa15.88■□□□□ 0.13
PRDM16-207ENST00000512462 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
PRDM16-207ENST00000512462 HFM1A2PYH4 1435 aa15.87■□□□□ 0.13
PRDM16-207ENST00000512462 STK26Q9P289 416 aa15.86■□□□□ 0.13
PRDM16-207ENST00000512462 CEP170Q5SW79 1584 aa15.86■□□□□ 0.13
PRDM16-207ENST00000512462 C11orf95C9JLR9 678 aaPredicted RBP15.86■□□□□ 0.13
PRDM16-207ENST00000512462 TCOF1Q13428 1488 aaKnown RBP15.85■□□□□ 0.13
PRDM16-207ENST00000512462 KIF7Q2M1P5 1343 aa15.85■□□□□ 0.13
PRDM16-207ENST00000512462 EFCAB2Q5VUJ9 269 aa15.84■□□□□ 0.13
PRDM16-207ENST00000512462 PPP4R2Q9NY27 417 aa15.84■□□□□ 0.13
PRDM16-207ENST00000512462 NAIPQ13075 1403 aa15.83■□□□□ 0.12
PRDM16-207ENST00000512462 NUP153P49790 1475 aaKnown RBP15.83■□□□□ 0.12
PRDM16-207ENST00000512462 AFAP1Q8N556 730 aa15.82■□□□□ 0.12
PRDM16-207ENST00000512462 RAPGEF6Q8TEU7 1601 aa15.82■□□□□ 0.12
PRDM16-207ENST00000512462 USP47Q96K76 1375 aa15.82■□□□□ 0.12
PRDM16-207ENST00000512462 TMF1P82094 1093 aa15.82■□□□□ 0.12
PRDM16-207ENST00000512462 CCDC146Q8IYE0 955 aa15.8■□□□□ 0.12
PRDM16-207ENST00000512462 NUP160Q12769 1436 aa15.8■□□□□ 0.12
PRDM16-207ENST00000512462 RGS3P49796 1198 aa15.8■□□□□ 0.12
PRDM16-207ENST00000512462 NBPF1Q3BBV0 1214 aa15.8■□□□□ 0.12
PRDM16-207ENST00000512462 MIA2Q96PC5 1412 aa15.8■□□□□ 0.12
PRDM16-207ENST00000512462 SPAG9O60271 1321 aaKnown RBP15.79■□□□□ 0.12
PRDM16-207ENST00000512462 FRAT1Q92837 279 aaPredicted RBP15.79■□□□□ 0.12
PRDM16-207ENST00000512462 PLIN1O60240 522 aa15.78■□□□□ 0.12
PRDM16-207ENST00000512462 SOX12O15370 315 aa15.78■□□□□ 0.12
PRDM16-207ENST00000512462 PLB1Q6P1J6 1458 aa15.77■□□□□ 0.12
PRDM16-207ENST00000512462 PANK3Q9H999 370 aa15.77■□□□□ 0.12
PRDM16-207ENST00000512462 KIF15Q9NS87 1388 aa15.77■□□□□ 0.12
PRDM16-207ENST00000512462 NEFMP07197 916 aa15.76■□□□□ 0.11
PRDM16-207ENST00000512462 ARXQ96QS3 562 aa15.76■□□□□ 0.11
PRDM16-207ENST00000512462 ARID4BQ4LE39 1312 aaPredicted RBP15.76■□□□□ 0.11
PRDM16-207ENST00000512462 TRAK1Q9UPV9 953 aa15.76■□□□□ 0.11
PRDM16-207ENST00000512462 CCDC7Q96M83 1385 aa15.76■□□□□ 0.11
PRDM16-207ENST00000512462 ZBTB47Q9UFB7 747 aaPredicted RBP15.75■□□□□ 0.11
PRDM16-207ENST00000512462 GCC2Q8IWJ2 1684 aa15.75■□□□□ 0.11
PRDM16-207ENST00000512462 ANKRD50Q9ULJ7 1429 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms