RNA–Protein interactions for RNA: ENST00000512191.1

CAST-237, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-237ENST00000512191 PKD2Q13563 968 aa9.17□□□□□ -0.94
CAST-237ENST00000512191 DNAJC5Q9H3Z4 198 aa9.17□□□□□ -0.94
CAST-237ENST00000512191 PHF8Q9UPP1 1060 aa9.16□□□□□ -0.94
CAST-237ENST00000512191 MICALL2Q8IY33 904 aa9.14□□□□□ -0.95
CAST-237ENST00000512191 CDAN1Q8IWY9 1227 aa9.13□□□□□ -0.95
CAST-237ENST00000512191 NCAPD3P42695 1498 aa9.13□□□□□ -0.95
CAST-237ENST00000512191 RGL2O15211 777 aa9.12□□□□□ -0.95
CAST-237ENST00000512191 MS4A4AQ96JQ5 239 aa9.12□□□□□ -0.95
CAST-237ENST00000512191 CUX2O14529 1486 aa9.12□□□□□ -0.95
CAST-237ENST00000512191 ERCC6Q03468 1493 aa9.11□□□□□ -0.95
CAST-237ENST00000512191 DOK7Q18PE1 504 aa9.11□□□□□ -0.95
CAST-237ENST00000512191 RIMBP2O15034 1052 aa9.1□□□□□ -0.95
CAST-237ENST00000512191 EMP3P54852 163 aa9.1□□□□□ -0.95
CAST-237ENST00000512191 SMARCA2P51531 1590 aa9.09□□□□□ -0.95
CAST-237ENST00000512191 ZNF710Q8N1W2 664 aa9.09□□□□□ -0.95
CAST-237ENST00000512191 FBXO22Q8NEZ5 403 aa9.09□□□□□ -0.95
CAST-237ENST00000512191 MARVELD3Q96A59 401 aa9.08□□□□□ -0.96
CAST-237ENST00000512191 MFRPQ9BY79 579 aa9.07□□□□□ -0.96
CAST-237ENST00000512191 ATAD2BQ9ULI0 1458 aa9.06□□□□□ -0.96
CAST-237ENST00000512191 HMGXB3Q12766 1538 aa9.05□□□□□ -0.96
CAST-237ENST00000512191 HOXB3P14651 431 aaPredicted RBP9.05□□□□□ -0.96
CAST-237ENST00000512191 ZSWIM6Q9HCJ5 1215 aa9.03□□□□□ -0.96
CAST-237ENST00000512191 SMARCA4P51532 1647 aa9.02□□□□□ -0.96
CAST-237ENST00000512191 HOXB1P14653 301 aaPredicted RBP9.02□□□□□ -0.97
CAST-237ENST00000512191 BAZ1AQ9NRL2 1556 aaPredicted RBP9.02□□□□□ -0.97
CAST-237ENST00000512191 TMEM92Q6UXU6 159 aa9.01□□□□□ -0.97
CAST-237ENST00000512191 HS6ST3Q8IZP7 471 aa9.01□□□□□ -0.97
CAST-237ENST00000512191 BAZ1BQ9UIG0 1483 aaKnown RBP9□□□□□ -0.97
CAST-237ENST00000512191 FAM205CA6NFA0 338 aa8.99□□□□□ -0.97
CAST-237ENST00000512191 HS3ST6Q96QI5 342 aa8.99□□□□□ -0.97
CAST-237ENST00000512191 PEG3Q9GZU2 1588 aa8.96□□□□□ -0.97
CAST-237ENST00000512191 ERBB3P21860 1342 aa8.96□□□□□ -0.98
CAST-237ENST00000512191 RYDENQ9NUL5 291 aaKnown RBP8.95□□□□□ -0.98
CAST-237ENST00000512191 LAMC3Q9Y6N6 1575 aa8.95□□□□□ -0.98
CAST-237ENST00000512191 CHGAP10645 457 aaKnown RBP8.94□□□□□ -0.98
CAST-237ENST00000512191 TMC2Q8TDI7 906 aa8.94□□□□□ -0.98
CAST-237ENST00000512191 PDS5BQ9NTI5 1447 aa8.93□□□□□ -0.98
CAST-237ENST00000512191 NESP48681 1621 aa8.93□□□□□ -0.98
CAST-237ENST00000512191 KIF3CO14782 793 aa8.92□□□□□ -0.98
CAST-237ENST00000512191 C2orf72A6NCS6 295 aa8.91□□□□□ -0.98
CAST-237ENST00000512191 GPR153Q6NV75 609 aa8.9□□□□□ -0.98
CAST-237ENST00000512191 POTEB3A0JP26 581 aa8.89□□□□□ -0.99
CAST-237ENST00000512191 POTEBQ6S5H4 581 aa8.89□□□□□ -0.99
CAST-237ENST00000512191 SPNS2Q8IVW8 549 aa8.89□□□□□ -0.99
CAST-237ENST00000512191 VARS2Q5ST30 1063 aaKnown RBP8.88□□□□□ -0.99
CAST-237ENST00000512191 THOC2Q8NI27 1593 aaKnown RBP8.87□□□□□ -0.99
CAST-237ENST00000512191 PPP1R37O75864 691 aa8.87□□□□□ -0.99
CAST-237ENST00000512191 KRTAP3-3Q9BYR6 98 aa8.87□□□□□ -0.99
CAST-237ENST00000512191 KRTAP3-2Q9BYR7 98 aa8.87□□□□□ -0.99
CAST-237ENST00000512191 MROH2BQ7Z745 1585 aa8.86□□□□□ -0.99
CAST-237ENST00000512191 SLC34A2O95436 690 aa8.86□□□□□ -0.99
CAST-237ENST00000512191 ARSIQ5FYB1 569 aa8.86□□□□□ -0.99
CAST-237ENST00000512191 MMRN1Q13201 1228 aa8.85□□□□□ -0.99
CAST-237ENST00000512191 CADPSQ9ULU8 1353 aa8.85□□□□□ -0.99
CAST-237ENST00000512191 ZNF687Q8N1G0 1237 aa8.83□□□□□ -1
CAST-237ENST00000512191 KIF21AQ7Z4S6 1674 aa8.82□□□□□ -1
CAST-237ENST00000512191 ZNF316A6NFI3 1004 aaPredicted RBP8.82□□□□□ -1
CAST-237ENST00000512191 MRC2Q9UBG0 1479 aa8.82□□□□□ -1
CAST-237ENST00000512191 GPHNQ9NQX3 736 aaPredicted RBP8.8□□□□□ -1
CAST-237ENST00000512191 PCDHGA4Q9Y5G9 962 aa8.8□□□□□ -1
CAST-237ENST00000512191 FOXK1P85037 733 aa8.79□□□□□ -1
CAST-237ENST00000512191 NKX1-1Q15270 411 aaPredicted RBP8.79□□□□□ -1
CAST-237ENST00000512191 CEP164Q9UPV0 1460 aa8.78□□□□□ -1
CAST-237ENST00000512191 NUDT7P0C024 238 aa8.78□□□□□ -1
CAST-237ENST00000512191 KHSRPQ92945 711 aaKnown RBP eCLIP8.78□□□□□ -1
CAST-237ENST00000512191 WDR62O43379 1518 aa8.78□□□□□ -1
CAST-237ENST00000512191 PSDA5PKW4 1024 aaPredicted RBP8.77□□□□□ -1.01
CAST-237ENST00000512191 TBC1D12O60347 775 aa8.76□□□□□ -1.01
CAST-237ENST00000512191 PBX2P40425 430 aa8.76□□□□□ -1.01
CAST-237ENST00000512191 PTGER2P43116 358 aa8.76□□□□□ -1.01
CAST-237ENST00000512191 PLPP6Q8IY26 295 aa8.76□□□□□ -1.01
CAST-237ENST00000512191 PTCD2Q8WV60 388 aaKnown RBP8.75□□□□□ -1.01
CAST-237ENST00000512191 WIZO95785 1651 aa8.75□□□□□ -1.01
CAST-237ENST00000512191 FANCD2Q9BXW9 1451 aa8.74□□□□□ -1.01
CAST-237ENST00000512191 DSG2Q14126 1118 aa8.73□□□□□ -1.01
CAST-237ENST00000512191 LHX6Q9UPM6 363 aa8.73□□□□□ -1.01
CAST-237ENST00000512191 CFTRP13569 1480 aa8.72□□□□□ -1.01
CAST-237ENST00000512191 CRISPLD2Q9H0B8 497 aa8.71□□□□□ -1.02
CAST-237ENST00000512191 GTPBP6O43824 516 aaPredicted RBP8.7□□□□□ -1.02
CAST-237ENST00000512191 PDE4AP27815 886 aa8.7□□□□□ -1.02
CAST-237ENST00000512191 LSM11P83369 360 aaKnown RBP eCLIP8.69□□□□□ -1.02
CAST-237ENST00000512191 RNF166Q96A37 237 aaPredicted RBP8.69□□□□□ -1.02
CAST-237ENST00000512191 MYT1LQ9UL68 1186 aa8.69□□□□□ -1.02
CAST-237ENST00000512191 TOP2AP11388 1531 aaKnown RBP8.69□□□□□ -1.02
CAST-237ENST00000512191 PPP1R15BQ5SWA1 713 aa8.68□□□□□ -1.02
CAST-237ENST00000512191 ANKRD13DQ6ZTN6 518 aa8.68□□□□□ -1.02
CAST-237ENST00000512191 RSF1Q96T23 1441 aaPredicted RBP8.68□□□□□ -1.02
CAST-237ENST00000512191 PPP4R3BQ5MIZ7 849 aa8.66□□□□□ -1.02
CAST-237ENST00000512191 KDM4FA0A1W2PPD8 638 aa8.65□□□□□ -1.02
CAST-237ENST00000512191 OXER1Q8TDS5 423 aa8.65□□□□□ -1.02
CAST-237ENST00000512191 KCNH8Q96L42 1107 aa8.65□□□□□ -1.02
CAST-237ENST00000512191 AMER1Q5JTC6 1135 aaPredicted RBP8.64□□□□□ -1.03
CAST-237ENST00000512191 NCKAP5LQ9HCH0 1330 aa8.63□□□□□ -1.03
CAST-237ENST00000512191 ARHGAP33O14559 1287 aa8.63□□□□□ -1.03
CAST-237ENST00000512191 DDX27Q96GQ7 796 aaKnown RBP8.63□□□□□ -1.03
CAST-237ENST00000512191 URB2Q14146 1524 aaKnown RBP8.63□□□□□ -1.03
CAST-237ENST00000512191 UPF1Q92900 1129 aaKnown RBP eCLIP8.62□□□□□ -1.03
CAST-237ENST00000512191 ABCC8Q09428 1581 aa8.61□□□□□ -1.03
CAST-237ENST00000512191 PRDM2Q13029 1718 aa8.61□□□□□ -1.03
CAST-237ENST00000512191 LARP6Q9BRS8 491 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms