RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 CFAP43Q8NDM7 1665 aa14.1□□□□□ -0.15
NR1I3-230ENST00000511944 TIAM1Q13009 1591 aa14.1□□□□□ -0.15
NR1I3-230ENST00000511944 HECW1Q76N89 1606 aa14.1□□□□□ -0.15
NR1I3-230ENST00000511944 CCDC18Q5T9S5 1454 aa14.1□□□□□ -0.15
NR1I3-230ENST00000511944 TRIM26Q12899 539 aaPredicted RBP14.08□□□□□ -0.16
NR1I3-230ENST00000511944 PRG4Q92954 1404 aaPredicted RBP14.05□□□□□ -0.16
NR1I3-230ENST00000511944 KLHL34Q8N239 644 aa14.04□□□□□ -0.16
NR1I3-230ENST00000511944 P3H3Q8IVL6 736 aa14.03□□□□□ -0.16
NR1I3-230ENST00000511944 LRRC9Q6ZRR7 1453 aa14.03□□□□□ -0.16
NR1I3-230ENST00000511944 RAPGEF6Q8TEU7 1601 aa14.03□□□□□ -0.16
NR1I3-230ENST00000511944 ABCA8O94911 1581 aa14□□□□□ -0.17
NR1I3-230ENST00000511944 PLEKHG5O94827 1062 aa14□□□□□ -0.17
NR1I3-230ENST00000511944 FARP1Q9Y4F1 1045 aaPredicted RBP14□□□□□ -0.17
NR1I3-230ENST00000511944 EPRSP07814 1512 aaKnown RBP14□□□□□ -0.17
NR1I3-230ENST00000511944 EHBP1L1Q8N3D4 1523 aa13.99□□□□□ -0.17
NR1I3-230ENST00000511944 PTPRGP23470 1445 aa13.98□□□□□ -0.17
NR1I3-230ENST00000511944 NUP153P49790 1475 aaKnown RBP13.97□□□□□ -0.17
NR1I3-230ENST00000511944 SPOCK2Q92563 424 aa13.95□□□□□ -0.18
NR1I3-230ENST00000511944 UHRF1BP1LA0JNW5 1464 aa13.94□□□□□ -0.18
NR1I3-230ENST00000511944 NUBP1P53384 320 aa13.94□□□□□ -0.18
NR1I3-230ENST00000511944 LRRIQ1Q96JM4 1722 aa13.94□□□□□ -0.18
NR1I3-230ENST00000511944 MTUS2Q5JR59 1369 aa13.94□□□□□ -0.18
NR1I3-230ENST00000511944 RRBP1Q9P2E9 1410 aaKnown RBP13.93□□□□□ -0.18
NR1I3-230ENST00000511944 ZBTB47Q9UFB7 747 aaPredicted RBP13.93□□□□□ -0.18
NR1I3-230ENST00000511944 PLB1Q6P1J6 1458 aa13.93□□□□□ -0.18
NR1I3-230ENST00000511944 UACAQ9BZF9 1416 aa13.92□□□□□ -0.18
NR1I3-230ENST00000511944 KANK4Q5T7N3 995 aaPredicted RBP13.92□□□□□ -0.18
NR1I3-230ENST00000511944 CDK11AQ9UQ88 783 aaPredicted RBP13.92□□□□□ -0.18
NR1I3-230ENST00000511944 ARHGEF11O15085 1522 aa13.91□□□□□ -0.18
NR1I3-230ENST00000511944 ABCC2Q92887 1545 aa13.91□□□□□ -0.18
NR1I3-230ENST00000511944 SUPT6HQ7KZ85 1726 aaKnown RBP13.9□□□□□ -0.18
NR1I3-230ENST00000511944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.18
NR1I3-230ENST00000511944 PCGF6Q9BYE7 350 aa13.89□□□□□ -0.19
NR1I3-230ENST00000511944 RTN4Q9NQC3 1192 aaKnown RBP13.89□□□□□ -0.19
NR1I3-230ENST00000511944 ERCC6L2Q5T890 1561 aa13.88□□□□□ -0.19
NR1I3-230ENST00000511944 CDK13Q14004 1512 aaKnown RBP13.88□□□□□ -0.19
NR1I3-230ENST00000511944 RASEFQ8IZ41 740 aa13.87□□□□□ -0.19
NR1I3-230ENST00000511944 ATP1B4Q9UN42 357 aaPredicted RBP13.87□□□□□ -0.19
NR1I3-230ENST00000511944 TROQ12816 1431 aaPredicted RBP13.87□□□□□ -0.19
NR1I3-230ENST00000511944 ADCY10Q96PN6 1610 aa13.86□□□□□ -0.19
NR1I3-230ENST00000511944 MAGI3Q5TCQ9 1506 aa13.86□□□□□ -0.19
NR1I3-230ENST00000511944 NPM1P06748 294 aaKnown RBP eCLIP13.86□□□□□ -0.19
NR1I3-230ENST00000511944 NCOA2Q15596 1464 aa13.86□□□□□ -0.19
NR1I3-230ENST00000511944 PPARGC1BQ86YN6 1023 aaKnown RBP13.85□□□□□ -0.19
NR1I3-230ENST00000511944 ATP10BO94823 1461 aa13.85□□□□□ -0.19
NR1I3-230ENST00000511944 KDM5BQ9UGL1 1544 aa13.85□□□□□ -0.19
NR1I3-230ENST00000511944 CCNB3Q8WWL7 1395 aa13.84□□□□□ -0.19
NR1I3-230ENST00000511944 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.19
NR1I3-230ENST00000511944 MYOM3Q5VTT5 1437 aa13.83□□□□□ -0.2
NR1I3-230ENST00000511944 MIA2Q96PC5 1412 aa13.82□□□□□ -0.2
NR1I3-230ENST00000511944 FGD6Q6ZV73 1430 aa13.81□□□□□ -0.2
NR1I3-230ENST00000511944 POTEHQ6S545 545 aa13.81□□□□□ -0.2
NR1I3-230ENST00000511944 KIF14Q15058 1648 aa13.79□□□□□ -0.2
NR1I3-230ENST00000511944 TCOF1Q13428 1488 aaKnown RBP13.79□□□□□ -0.2
NR1I3-230ENST00000511944 PLEKHD1A6NEE1 506 aa13.78□□□□□ -0.2
NR1I3-230ENST00000511944 PKD2Q13563 968 aa13.78□□□□□ -0.2
NR1I3-230ENST00000511944 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
NR1I3-230ENST00000511944 ITSN2Q9NZM3 1697 aa13.77□□□□□ -0.21
NR1I3-230ENST00000511944 ZCCHC11Q5TAX3 1644 aaKnown RBP13.75□□□□□ -0.21
NR1I3-230ENST00000511944 TTBK1Q5TCY1 1321 aaPredicted RBP13.75□□□□□ -0.21
NR1I3-230ENST00000511944 TSPYL2Q9H2G4 693 aaPredicted RBP13.74□□□□□ -0.21
NR1I3-230ENST00000511944 ABCC10Q5T3U5 1492 aa13.74□□□□□ -0.21
NR1I3-230ENST00000511944 C19orf67A6NJJ6 358 aa13.73□□□□□ -0.21
NR1I3-230ENST00000511944 DCAF8Q5TAQ9 597 aa13.73□□□□□ -0.21
NR1I3-230ENST00000511944 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
NR1I3-230ENST00000511944 PTPN23Q9H3S7 1636 aa13.72□□□□□ -0.21
NR1I3-230ENST00000511944 EVX2Q03828 476 aa13.7□□□□□ -0.22
NR1I3-230ENST00000511944 ARAP3Q8WWN8 1544 aa13.69□□□□□ -0.22
NR1I3-230ENST00000511944 GPATCH8Q9UKJ3 1502 aaKnown RBP13.69□□□□□ -0.22
NR1I3-230ENST00000511944 WDR7Q9Y4E6 1490 aa13.69□□□□□ -0.22
NR1I3-230ENST00000511944 CD44P16070 742 aaKnown RBP13.69□□□□□ -0.22
NR1I3-230ENST00000511944 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
NR1I3-230ENST00000511944 AKNAQ7Z591 1439 aa13.68□□□□□ -0.22
NR1I3-230ENST00000511944 RIMBP3CA6NJZ7 1639 aa13.68□□□□□ -0.22
NR1I3-230ENST00000511944 RIMBP3BA6NNM3 1639 aa13.68□□□□□ -0.22
NR1I3-230ENST00000511944 RIMBP3Q9UFD9 1639 aa13.68□□□□□ -0.22
NR1I3-230ENST00000511944 PREX2Q70Z35 1606 aa13.67□□□□□ -0.22
NR1I3-230ENST00000511944 ARID3CA6NKF2 412 aa13.66□□□□□ -0.22
NR1I3-230ENST00000511944 GSE1Q14687 1217 aa13.66□□□□□ -0.22
NR1I3-230ENST00000511944 HAX1O00165 279 aa13.65□□□□□ -0.22
NR1I3-230ENST00000511944 CCDC61Q9Y6R9 512 aa13.65□□□□□ -0.22
NR1I3-230ENST00000511944 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
NR1I3-230ENST00000511944 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
NR1I3-230ENST00000511944 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.64□□□□□ -0.23
NR1I3-230ENST00000511944 CDC42BPAQ5VT25 1732 aa13.64□□□□□ -0.23
NR1I3-230ENST00000511944 PLEKHH2Q8IVE3 1493 aa13.64□□□□□ -0.23
NR1I3-230ENST00000511944 HRCP23327 699 aa13.64□□□□□ -0.23
NR1I3-230ENST00000511944 CAMSAP2Q08AD1 1489 aa13.63□□□□□ -0.23
NR1I3-230ENST00000511944 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
NR1I3-230ENST00000511944 DNMT1P26358 1616 aaKnown RBP13.63□□□□□ -0.23
NR1I3-230ENST00000511944 ASXL2Q76L83 1435 aa13.63□□□□□ -0.23
NR1I3-230ENST00000511944 ABCA9Q8IUA7 1624 aa13.62□□□□□ -0.23
NR1I3-230ENST00000511944 FAM50AQ14320 339 aaKnown RBP13.62□□□□□ -0.23
NR1I3-230ENST00000511944 CFDP1Q9UEE9 299 aaPredicted RBP13.62□□□□□ -0.23
NR1I3-230ENST00000511944 HFM1A2PYH4 1435 aa13.62□□□□□ -0.23
NR1I3-230ENST00000511944 TTC37Q6PGP7 1564 aa13.62□□□□□ -0.23
NR1I3-230ENST00000511944 MYO5CQ9NQX4 1742 aa13.61□□□□□ -0.23
NR1I3-230ENST00000511944 SHANK2Q9UPX8 1470 aa13.61□□□□□ -0.23
NR1I3-230ENST00000511944 ROCK1Q13464 1354 aa13.61□□□□□ -0.23
NR1I3-230ENST00000511944 PLCH2O75038 1416 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms