RNA–Protein interactions for RNA: ENST00000511649.5

RAB28-207, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-207ENST00000511649 GRIN2BQ13224 1484 aa11.76□□□□□ -0.53
RAB28-207ENST00000511649 SUPT5HO00267 1087 aaKnown RBP11.75□□□□□ -0.53
RAB28-207ENST00000511649 RGL2O15211 777 aa11.75□□□□□ -0.53
RAB28-207ENST00000511649 PCDHB8Q9UN66 801 aa11.75□□□□□ -0.53
RAB28-207ENST00000511649 SYNJ2O15056 1496 aa11.74□□□□□ -0.53
RAB28-207ENST00000511649 BIVM-ERCC5R4GMW8 1640 aa11.74□□□□□ -0.53
RAB28-207ENST00000511649 GAPVD1Q14C86 1478 aa11.73□□□□□ -0.53
RAB28-207ENST00000511649 CYB5RLQ6IPT4 315 aa11.73□□□□□ -0.53
RAB28-207ENST00000511649 TRPC6Q9Y210 931 aa11.73□□□□□ -0.53
RAB28-207ENST00000511649 ERCC6L2Q5T890 1561 aa11.72□□□□□ -0.53
RAB28-207ENST00000511649 TOP2BQ02880 1626 aa11.71□□□□□ -0.53
RAB28-207ENST00000511649 RIOK3O14730 519 aaKnown RBP11.71□□□□□ -0.53
RAB28-207ENST00000511649 ADAMTS12P58397 1594 aa11.71□□□□□ -0.54
RAB28-207ENST00000511649 CEP170Q5SW79 1584 aa11.68□□□□□ -0.54
RAB28-207ENST00000511649 TIE1P35590 1138 aa11.67□□□□□ -0.54
RAB28-207ENST00000511649 VGFO15240 615 aaPredicted RBP11.66□□□□□ -0.54
RAB28-207ENST00000511649 GRIN2AQ12879 1464 aa11.65□□□□□ -0.54
RAB28-207ENST00000511649 PDAP1Q13442 181 aaKnown RBP11.65□□□□□ -0.54
RAB28-207ENST00000511649 OTUD5Q96G74 571 aa11.65□□□□□ -0.54
RAB28-207ENST00000511649 WRNQ14191 1432 aaPredicted RBP eCLIP11.65□□□□□ -0.54
RAB28-207ENST00000511649 NUP160Q12769 1436 aa11.64□□□□□ -0.55
RAB28-207ENST00000511649 PSEN1P49768 467 aa11.64□□□□□ -0.55
RAB28-207ENST00000511649 CHMP7Q8WUX9 453 aaPredicted RBP11.64□□□□□ -0.55
RAB28-207ENST00000511649 BMP2KQ9NSY1 1161 aaPredicted RBP11.64□□□□□ -0.55
RAB28-207ENST00000511649 POTEMA6NI47 508 aa11.63□□□□□ -0.55
RAB28-207ENST00000511649 TAOK2Q9UL54 1235 aa11.63□□□□□ -0.55
RAB28-207ENST00000511649 SHROOM2Q13796 1616 aa11.62□□□□□ -0.55
RAB28-207ENST00000511649 TTLL13PA6NNM8 815 aa11.62□□□□□ -0.55
RAB28-207ENST00000511649 ATMINO43313 823 aaPredicted RBP11.62□□□□□ -0.55
RAB28-207ENST00000511649 ASTLQ6HA08 431 aaPredicted RBP11.62□□□□□ -0.55
RAB28-207ENST00000511649 TMEM106CQ9BVX2 250 aa11.61□□□□□ -0.55
RAB28-207ENST00000511649 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.6□□□□□ -0.55
RAB28-207ENST00000511649 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
RAB28-207ENST00000511649 ZFP91Q96JP5 570 aaPredicted RBP11.6□□□□□ -0.55
RAB28-207ENST00000511649 PCDH10Q9P2E7 1040 aa11.6□□□□□ -0.55
RAB28-207ENST00000511649 ATN1P54259 1190 aaPredicted RBP11.59□□□□□ -0.55
RAB28-207ENST00000511649 POTEGQ6S5H5 508 aa11.58□□□□□ -0.56
RAB28-207ENST00000511649 ERICH3Q5RHP9 1530 aa11.58□□□□□ -0.56
RAB28-207ENST00000511649 FHAD1B1AJZ9 1412 aa11.56□□□□□ -0.56
RAB28-207ENST00000511649 RUSC2Q8N2Y8 1516 aa11.55□□□□□ -0.56
RAB28-207ENST00000511649 TRIM35Q9UPQ4 493 aa11.54□□□□□ -0.56
RAB28-207ENST00000511649 STK25O00506 426 aa11.53□□□□□ -0.56
RAB28-207ENST00000511649 POTEB2H3BUK9 544 aa11.52□□□□□ -0.57
RAB28-207ENST00000511649 BCL11BQ9C0K0 894 aaPredicted RBP11.52□□□□□ -0.57
RAB28-207ENST00000511649 HS6ST3Q8IZP7 471 aa11.5□□□□□ -0.57
RAB28-207ENST00000511649 CABP2Q9NPB3 220 aa11.5□□□□□ -0.57
RAB28-207ENST00000511649 STK24Q9Y6E0 443 aa11.5□□□□□ -0.57
RAB28-207ENST00000511649 CHGAP10645 457 aaKnown RBP11.49□□□□□ -0.57
RAB28-207ENST00000511649 KIF13AQ9H1H9 1805 aa11.49□□□□□ -0.57
RAB28-207ENST00000511649 PRG4Q92954 1404 aaPredicted RBP11.47□□□□□ -0.57
RAB28-207ENST00000511649 SLC39A7Q92504 469 aa11.47□□□□□ -0.57
RAB28-207ENST00000511649 METRNQ9UJH8 293 aa11.47□□□□□ -0.57
RAB28-207ENST00000511649 GOLGA2Q08379 1002 aa11.46□□□□□ -0.57
RAB28-207ENST00000511649 IGF1RP08069 1367 aa11.44□□□□□ -0.58
RAB28-207ENST00000511649 IER5LQ5T953 404 aa11.44□□□□□ -0.58
RAB28-207ENST00000511649 ADCY10Q96PN6 1610 aa11.44□□□□□ -0.58
RAB28-207ENST00000511649 C7P10643 843 aa11.43□□□□□ -0.58
RAB28-207ENST00000511649 MKRN3Q13064 507 aaKnown RBP11.43□□□□□ -0.58
RAB28-207ENST00000511649 EFCAB3Q8N7B9 438 aa11.43□□□□□ -0.58
RAB28-207ENST00000511649 CUL7Q14999 1698 aa11.42□□□□□ -0.58
RAB28-207ENST00000511649 POTEFA5A3E0 1075 aa11.4□□□□□ -0.58
RAB28-207ENST00000511649 JPH4Q96JJ6 628 aa11.39□□□□□ -0.59
RAB28-207ENST00000511649 IRX5P78411 483 aaPredicted RBP11.38□□□□□ -0.59
RAB28-207ENST00000511649 COLQQ9Y215 455 aaPredicted RBP11.38□□□□□ -0.59
RAB28-207ENST00000511649 KIAA0586Q9BVV6 1533 aa11.38□□□□□ -0.59
RAB28-207ENST00000511649 KIF27Q86VH2 1401 aa11.37□□□□□ -0.59
RAB28-207ENST00000511649 DIP2BQ9P265 1576 aa11.37□□□□□ -0.59
RAB28-207ENST00000511649 SOX12O15370 315 aa11.36□□□□□ -0.59
RAB28-207ENST00000511649 MAPKBP1O60336 1514 aa11.35□□□□□ -0.59
RAB28-207ENST00000511649 SEC24BO95487 1268 aa11.35□□□□□ -0.59
RAB28-207ENST00000511649 MAMSTRQ6ZN01 415 aa11.35□□□□□ -0.59
RAB28-207ENST00000511649 ILDR1Q86SU0 546 aaPredicted RBP11.35□□□□□ -0.59
RAB28-207ENST00000511649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.35□□□□□ -0.591e-6■■□□□ 13.8
RAB28-207ENST00000511649 NKX1-1Q15270 411 aaPredicted RBP11.34□□□□□ -0.59
RAB28-207ENST00000511649 MFRPQ9BY79 579 aa11.34□□□□□ -0.59
RAB28-207ENST00000511649 PHF8Q9UPP1 1060 aa11.34□□□□□ -0.59
RAB28-207ENST00000511649 ABCC10Q5T3U5 1492 aa11.33□□□□□ -0.6
RAB28-207ENST00000511649 PLCG2P16885 1265 aa11.33□□□□□ -0.6
RAB28-207ENST00000511649 OCEL1Q9H607 264 aa11.33□□□□□ -0.6
RAB28-207ENST00000511649 CARMIL1Q5VZK9 1371 aa11.32□□□□□ -0.6
RAB28-207ENST00000511649 PDCD7Q8N8D1 485 aaKnown RBP11.32□□□□□ -0.6
RAB28-207ENST00000511649 DISP1Q96F81 1524 aa11.31□□□□□ -0.6
RAB28-207ENST00000511649 BBXQ8WY36 941 aaPredicted RBP11.31□□□□□ -0.6
RAB28-207ENST00000511649 IQGAP2Q13576 1575 aa11.31□□□□□ -0.6
RAB28-207ENST00000511649 NLRP6P59044 892 aa11.3□□□□□ -0.6
RAB28-207ENST00000511649 FBXO22Q8NEZ5 403 aa11.3□□□□□ -0.6
RAB28-207ENST00000511649 POTEJP0CG39 1038 aa11.29□□□□□ -0.6
RAB28-207ENST00000511649 PPRC1Q5VV67 1664 aaKnown RBP11.29□□□□□ -0.6
RAB28-207ENST00000511649 MS4A4AQ96JQ5 239 aa11.28□□□□□ -0.6
RAB28-207ENST00000511649 ABCC2Q92887 1545 aa11.27□□□□□ -0.61
RAB28-207ENST00000511649 TSPOAP1O95153 1857 aa11.26□□□□□ -0.61
RAB28-207ENST00000511649 FAM163AQ96GL9 167 aaPredicted RBP11.25□□□□□ -0.61
RAB28-207ENST00000511649 UGGT2Q9NYU1 1516 aa11.25□□□□□ -0.61
RAB28-207ENST00000511649 KIAA0556O60303 1618 aa11.24□□□□□ -0.61
RAB28-207ENST00000511649 FAM69CQ0P6D2 419 aa11.24□□□□□ -0.61
RAB28-207ENST00000511649 DPY19L2Q6NUT2 758 aa11.24□□□□□ -0.61
RAB28-207ENST00000511649 PTPRGP23470 1445 aa11.23□□□□□ -0.61
RAB28-207ENST00000511649 RAPGEF2Q9Y4G8 1499 aa11.23□□□□□ -0.61
RAB28-207ENST00000511649 GTPBP6O43824 516 aaPredicted RBP11.22□□□□□ -0.61
RAB28-207ENST00000511649 LCE2DQ5TA82 110 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms