RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 ADAMTS12P58397 1594 aa13.07□□□□□ -0.32
SMAD1-210ENST00000511255 FHAD1B1AJZ9 1412 aa13.07□□□□□ -0.32
SMAD1-210ENST00000511255 KIF27Q86VH2 1401 aa13.07□□□□□ -0.32
SMAD1-210ENST00000511255 DCAF8Q5TAQ9 597 aa13.07□□□□□ -0.32
SMAD1-210ENST00000511255 MAMSTRQ6ZN01 415 aa13.06□□□□□ -0.32
SMAD1-210ENST00000511255 ARHGEF11O15085 1522 aa13.06□□□□□ -0.32
SMAD1-210ENST00000511255 RIMBP3CA6NJZ7 1639 aa13.05□□□□□ -0.32
SMAD1-210ENST00000511255 RIMBP3BA6NNM3 1639 aa13.05□□□□□ -0.32
SMAD1-210ENST00000511255 RIMBP3Q9UFD9 1639 aa13.05□□□□□ -0.32
SMAD1-210ENST00000511255 GRIN2AQ12879 1464 aa13.04□□□□□ -0.32
SMAD1-210ENST00000511255 FAM163AQ96GL9 167 aaPredicted RBP13.03□□□□□ -0.32
SMAD1-210ENST00000511255 CLASP1Q7Z460 1538 aa13.03□□□□□ -0.32
SMAD1-210ENST00000511255 KIF12Q96FN5 646 aa13.02□□□□□ -0.33
SMAD1-210ENST00000511255 ATN1P54259 1190 aaPredicted RBP13.01□□□□□ -0.33
SMAD1-210ENST00000511255 IGF1RP08069 1367 aa13□□□□□ -0.33
SMAD1-210ENST00000511255 GSE1Q14687 1217 aa13□□□□□ -0.33
SMAD1-210ENST00000511255 POTEFA5A3E0 1075 aa12.99□□□□□ -0.33
SMAD1-210ENST00000511255 CYB5RLQ6IPT4 315 aa12.99□□□□□ -0.33
SMAD1-210ENST00000511255 NUP160Q12769 1436 aa12.97□□□□□ -0.33
SMAD1-210ENST00000511255 MAP3K13O43283 966 aa12.97□□□□□ -0.33
SMAD1-210ENST00000511255 CEP170Q5SW79 1584 aa12.97□□□□□ -0.33
SMAD1-210ENST00000511255 CIZ1Q9ULV3 898 aaPredicted RBP12.96□□□□□ -0.33
SMAD1-210ENST00000511255 CUL7Q14999 1698 aa12.96□□□□□ -0.34
SMAD1-210ENST00000511255 CARMIL1Q5VZK9 1371 aa12.95□□□□□ -0.34
SMAD1-210ENST00000511255 PYGBP11216 843 aa12.95□□□□□ -0.34
SMAD1-210ENST00000511255 SCUBE2Q9NQ36 999 aa12.95□□□□□ -0.34
SMAD1-210ENST00000511255 ARAP1Q96P48 1450 aa12.95□□□□□ -0.34
SMAD1-210ENST00000511255 RUSC2Q8N2Y8 1516 aa12.93□□□□□ -0.34
SMAD1-210ENST00000511255 CHRM1P11229 460 aaPredicted RBP12.9□□□□□ -0.34
SMAD1-210ENST00000511255 TRPC6Q9Y210 931 aa12.9□□□□□ -0.34
SMAD1-210ENST00000511255 JPH4Q96JJ6 628 aa12.89□□□□□ -0.35
SMAD1-210ENST00000511255 BMP2KQ9NSY1 1161 aaPredicted RBP12.89□□□□□ -0.35
SMAD1-210ENST00000511255 SGIP1Q9BQI5 828 aa12.88□□□□□ -0.35
SMAD1-210ENST00000511255 PCDHB13Q9Y5F0 798 aa12.87□□□□□ -0.35
SMAD1-210ENST00000511255 PRG4Q92954 1404 aaPredicted RBP12.87□□□□□ -0.35
SMAD1-210ENST00000511255 ERCC6L2Q5T890 1561 aa12.86□□□□□ -0.35
SMAD1-210ENST00000511255 IFNL1Q8IU54 200 aa12.86□□□□□ -0.35
SMAD1-210ENST00000511255 KIAA0586Q9BVV6 1533 aa12.86□□□□□ -0.35
SMAD1-210ENST00000511255 RAPGEF2Q9Y4G8 1499 aa12.85□□□□□ -0.35
SMAD1-210ENST00000511255 SHROOM2Q13796 1616 aa12.85□□□□□ -0.35
SMAD1-210ENST00000511255 PKD2Q13563 968 aa12.84□□□□□ -0.35
SMAD1-210ENST00000511255 FAM9AQ8IZU1 332 aaPredicted RBP12.81□□□□□ -0.36
SMAD1-210ENST00000511255 PCDHB8Q9UN66 801 aa12.81□□□□□ -0.36
SMAD1-210ENST00000511255 COLQQ9Y215 455 aaPredicted RBP12.81□□□□□ -0.36
SMAD1-210ENST00000511255 TIE1P35590 1138 aa12.8□□□□□ -0.36
SMAD1-210ENST00000511255 TTBK1Q5TCY1 1321 aaPredicted RBP12.79□□□□□ -0.36
SMAD1-210ENST00000511255 IQGAP2Q13576 1575 aa12.78□□□□□ -0.36
SMAD1-210ENST00000511255 CDAN1Q8IWY9 1227 aa12.78□□□□□ -0.36
SMAD1-210ENST00000511255 EEA1Q15075 1411 aa12.77□□□□□ -0.37
SMAD1-210ENST00000511255 PRXQ9BXM0 1461 aa12.77□□□□□ -0.37
SMAD1-210ENST00000511255 CARMIL2Q6F5E8 1435 aa12.76□□□□□ -0.37
SMAD1-210ENST00000511255 RNF25Q96BH1 459 aaPredicted RBP12.74□□□□□ -0.37
SMAD1-210ENST00000511255 TTLL13PA6NNM8 815 aa12.73□□□□□ -0.37
SMAD1-210ENST00000511255 ZNF467Q7Z7K2 595 aaPredicted RBP12.72□□□□□ -0.37
SMAD1-210ENST00000511255 PTPRGP23470 1445 aa12.71□□□□□ -0.37
SMAD1-210ENST00000511255 ECM2O94769 699 aaPredicted RBP12.71□□□□□ -0.37
SMAD1-210ENST00000511255 CTTNBP2Q8WZ74 1663 aa12.7□□□□□ -0.38
SMAD1-210ENST00000511255 TNIKQ9UKE5 1360 aa12.7□□□□□ -0.38
SMAD1-210ENST00000511255 SEC24BO95487 1268 aa12.7□□□□□ -0.38
SMAD1-210ENST00000511255 UGGT2Q9NYU1 1516 aa12.69□□□□□ -0.38
SMAD1-210ENST00000511255 DISP1Q96F81 1524 aa12.67□□□□□ -0.38
SMAD1-210ENST00000511255 RANGAP1P46060 587 aaPredicted RBP12.66□□□□□ -0.38
SMAD1-210ENST00000511255 TMEM106CQ9BVX2 250 aa12.66□□□□□ -0.38
SMAD1-210ENST00000511255 KIAA0556O60303 1618 aa12.66□□□□□ -0.38
SMAD1-210ENST00000511255 RGL2O15211 777 aa12.65□□□□□ -0.38
SMAD1-210ENST00000511255 ST18O60284 1047 aa12.65□□□□□ -0.38
SMAD1-210ENST00000511255 GOLGA3Q08378 1498 aa12.65□□□□□ -0.38
SMAD1-210ENST00000511255 RIOK3O14730 519 aaKnown RBP12.64□□□□□ -0.39
SMAD1-210ENST00000511255 PSEN1P49768 467 aa12.64□□□□□ -0.39
SMAD1-210ENST00000511255 IER5LQ5T953 404 aa12.64□□□□□ -0.39
SMAD1-210ENST00000511255 TRIM35Q9UPQ4 493 aa12.64□□□□□ -0.39
SMAD1-210ENST00000511255 ADCY10Q96PN6 1610 aa12.63□□□□□ -0.39
SMAD1-210ENST00000511255 P3H3Q8IVL6 736 aa12.63□□□□□ -0.39
SMAD1-210ENST00000511255 KIF21BO75037 1637 aa12.62□□□□□ -0.39
SMAD1-210ENST00000511255 UBTFP17480 764 aaKnown RBP12.62□□□□□ -0.39
SMAD1-210ENST00000511255 PDAP1Q13442 181 aaKnown RBP12.62□□□□□ -0.39
SMAD1-210ENST00000511255 UACAQ9BZF9 1416 aa12.62□□□□□ -0.39
SMAD1-210ENST00000511255 SLAIN1Q8ND83 568 aa12.6□□□□□ -0.39
SMAD1-210ENST00000511255 ABCC2Q92887 1545 aa12.57□□□□□ -0.4
SMAD1-210ENST00000511255 FAM69CQ0P6D2 419 aa12.57□□□□□ -0.4
SMAD1-210ENST00000511255 UHRF1BP1LA0JNW5 1464 aa12.56□□□□□ -0.4
SMAD1-210ENST00000511255 PLB1Q6P1J6 1458 aa12.56□□□□□ -0.4
SMAD1-210ENST00000511255 MAPKBP1O60336 1514 aa12.56□□□□□ -0.4
SMAD1-210ENST00000511255 VGFO15240 615 aaPredicted RBP12.55□□□□□ -0.4
SMAD1-210ENST00000511255 RTN4Q9NQC3 1192 aaKnown RBP12.55□□□□□ -0.4
SMAD1-210ENST00000511255 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.54□□□□□ -0.4
SMAD1-210ENST00000511255 ZFP91Q96JP5 570 aaPredicted RBP12.54□□□□□ -0.4
SMAD1-210ENST00000511255 ABCC10Q5T3U5 1492 aa12.53□□□□□ -0.4
SMAD1-210ENST00000511255 SAMD9Q5K651 1589 aa12.53□□□□□ -0.4
SMAD1-210ENST00000511255 FHOD3Q2V2M9 1422 aa12.53□□□□□ -0.4
SMAD1-210ENST00000511255 ARID3CA6NKF2 412 aa12.52□□□□□ -0.41
SMAD1-210ENST00000511255 MMRN1Q13201 1228 aa12.52□□□□□ -0.41
SMAD1-210ENST00000511255 ASXL2Q76L83 1435 aa12.52□□□□□ -0.41
SMAD1-210ENST00000511255 KDM5BQ9UGL1 1544 aa12.51□□□□□ -0.41
SMAD1-210ENST00000511255 ABCA8O94911 1581 aa12.51□□□□□ -0.41
SMAD1-210ENST00000511255 AMER1Q5JTC6 1135 aaPredicted RBP12.5□□□□□ -0.41
SMAD1-210ENST00000511255 SPNS2Q8IVW8 549 aa12.5□□□□□ -0.41
SMAD1-210ENST00000511255 DIP2BQ9P265 1576 aa12.5□□□□□ -0.41
SMAD1-210ENST00000511255 KIF13AQ9H1H9 1805 aa12.49□□□□□ -0.41
SMAD1-210ENST00000511255 ZCCHC11Q5TAX3 1644 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms