RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 ILDR2Q71H61 639 aa14.32□□□□□ -0.12
PDPN-209ENST00000510906 ABCA8O94911 1581 aa14.3□□□□□ -0.12
PDPN-209ENST00000510906 ZCCHC11Q5TAX3 1644 aaKnown RBP14.3□□□□□ -0.12
PDPN-209ENST00000510906 RANGAP1P46060 587 aaPredicted RBP14.29□□□□□ -0.12
PDPN-209ENST00000510906 PKD2Q13563 968 aa14.28□□□□□ -0.12
PDPN-209ENST00000510906 GLI2P10070 1586 aa14.27□□□□□ -0.12
PDPN-209ENST00000510906 EPRSP07814 1512 aaKnown RBP14.27□□□□□ -0.12
PDPN-209ENST00000510906 SAMD9Q5K651 1589 aa14.26□□□□□ -0.13
PDPN-209ENST00000510906 KIF21BO75037 1637 aa14.26□□□□□ -0.13
PDPN-209ENST00000510906 WDR7Q9Y4E6 1490 aa14.25□□□□□ -0.13
PDPN-209ENST00000510906 ARID3CA6NKF2 412 aa14.25□□□□□ -0.13
PDPN-209ENST00000510906 TSPOAP1O95153 1857 aa14.25□□□□□ -0.13
PDPN-209ENST00000510906 FHOD3Q2V2M9 1422 aa14.23□□□□□ -0.13
PDPN-209ENST00000510906 SPOCK2Q92563 424 aa14.22□□□□□ -0.13
PDPN-209ENST00000510906 KDM6BO15054 1643 aa14.22□□□□□ -0.13
PDPN-209ENST00000510906 KCNH8Q96L42 1107 aa14.21□□□□□ -0.13
PDPN-209ENST00000510906 PPRC1Q5VV67 1664 aaKnown RBP14.2□□□□□ -0.14
PDPN-209ENST00000510906 ATP10BO94823 1461 aa14.2□□□□□ -0.14
PDPN-209ENST00000510906 UBTFP17480 764 aaKnown RBP14.2□□□□□ -0.14
PDPN-209ENST00000510906 MAP3K4Q9Y6R4 1608 aa14.19□□□□□ -0.14
PDPN-209ENST00000510906 KLHL34Q8N239 644 aa14.17□□□□□ -0.14
PDPN-209ENST00000510906 RAPGEF6Q8TEU7 1601 aa14.16□□□□□ -0.14
PDPN-209ENST00000510906 PLCD3Q8N3E9 789 aa14.16□□□□□ -0.14
PDPN-209ENST00000510906 COL17A1Q9UMD9 1497 aaPredicted RBP14.16□□□□□ -0.14
PDPN-209ENST00000510906 EFCAB5A4FU69 1503 aa14.15□□□□□ -0.14
PDPN-209ENST00000510906 HECW2Q9P2P5 1572 aa14.15□□□□□ -0.14
PDPN-209ENST00000510906 NUP153P49790 1475 aaKnown RBP14.15□□□□□ -0.14
PDPN-209ENST00000510906 TEX14Q8IWB6 1497 aa14.15□□□□□ -0.14
PDPN-209ENST00000510906 CD109Q6YHK3 1445 aa14.15□□□□□ -0.14
PDPN-209ENST00000510906 MAGI3Q5TCQ9 1506 aa14.12□□□□□ -0.15
PDPN-209ENST00000510906 MIER1Q8N108 512 aa14.12□□□□□ -0.15
PDPN-209ENST00000510906 ARHGAP35Q9NRY4 1499 aa14.1□□□□□ -0.15
PDPN-209ENST00000510906 CFAP43Q8NDM7 1665 aa14.1□□□□□ -0.15
PDPN-209ENST00000510906 PLCB2Q00722 1185 aa14.06□□□□□ -0.16
PDPN-209ENST00000510906 PLEKHD1A6NEE1 506 aa14.05□□□□□ -0.16
PDPN-209ENST00000510906 FMN1Q68DA7 1419 aa14.05□□□□□ -0.16
PDPN-209ENST00000510906 CDK13Q14004 1512 aaKnown RBP14.05□□□□□ -0.16
PDPN-209ENST00000510906 ABCA9Q8IUA7 1624 aa14.04□□□□□ -0.16
PDPN-209ENST00000510906 ZBTB47Q9UFB7 747 aaPredicted RBP14.03□□□□□ -0.16
PDPN-209ENST00000510906 ATP1B4Q9UN42 357 aaPredicted RBP14.03□□□□□ -0.16
PDPN-209ENST00000510906 RBM42Q9BTD8 480 aaKnown RBP14.02□□□□□ -0.17
PDPN-209ENST00000510906 ECM2O94769 699 aaPredicted RBP14.01□□□□□ -0.17
PDPN-209ENST00000510906 PLEKHG5O94827 1062 aa14□□□□□ -0.17
PDPN-209ENST00000510906 ARAP3Q8WWN8 1544 aa14□□□□□ -0.17
PDPN-209ENST00000510906 AKT1S1Q96B36 256 aa13.99□□□□□ -0.17
PDPN-209ENST00000510906 HECW1Q76N89 1606 aa13.98□□□□□ -0.17
PDPN-209ENST00000510906 NEO1Q92859 1461 aa13.98□□□□□ -0.17
PDPN-209ENST00000510906 PHLDB1Q86UU1 1377 aa13.97□□□□□ -0.17
PDPN-209ENST00000510906 DISP3Q9P2K9 1392 aa13.97□□□□□ -0.17
PDPN-209ENST00000510906 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.97□□□□□ -0.17
PDPN-209ENST00000510906 ADGRL1O94910 1474 aa13.96□□□□□ -0.17
PDPN-209ENST00000510906 RAPGEF3O95398 923 aa13.96□□□□□ -0.17
PDPN-209ENST00000510906 TTC37Q6PGP7 1564 aa13.95□□□□□ -0.18
PDPN-209ENST00000510906 CLIP1P30622 1438 aa13.94□□□□□ -0.18
PDPN-209ENST00000510906 SPDYE1Q8NFV5 336 aaPredicted RBP13.94□□□□□ -0.18
PDPN-209ENST00000510906 CDK11AQ9UQ88 783 aaPredicted RBP13.93□□□□□ -0.18
PDPN-209ENST00000510906 FANCAO15360 1455 aa13.93□□□□□ -0.18
PDPN-209ENST00000510906 CASKIN1Q8WXD9 1431 aa13.92□□□□□ -0.18
PDPN-209ENST00000510906 PCF11O94913 1555 aaKnown RBP13.92□□□□□ -0.18
PDPN-209ENST00000510906 AKNAQ7Z591 1439 aa13.91□□□□□ -0.18
PDPN-209ENST00000510906 TROQ12816 1431 aaPredicted RBP13.9□□□□□ -0.18
PDPN-209ENST00000510906 FRMPD1Q5SYB0 1578 aa13.9□□□□□ -0.18
PDPN-209ENST00000510906 PLCH2O75038 1416 aa13.9□□□□□ -0.19
PDPN-209ENST00000510906 DENND4BO75064 1496 aaPredicted RBP13.89□□□□□ -0.19
PDPN-209ENST00000510906 RGL2O15211 777 aa13.89□□□□□ -0.19
PDPN-209ENST00000510906 KIF14Q15058 1648 aa13.88□□□□□ -0.19
PDPN-209ENST00000510906 LRRIQ1Q96JM4 1722 aa13.87□□□□□ -0.19
PDPN-209ENST00000510906 CCDC18Q5T9S5 1454 aa13.87□□□□□ -0.19
PDPN-209ENST00000510906 FYCO1Q9BQS8 1478 aa13.87□□□□□ -0.19
PDPN-209ENST00000510906 CFAP74Q9C0B2 1584 aa13.86□□□□□ -0.19
PDPN-209ENST00000510906 EFCAB2Q5VUJ9 269 aa13.85□□□□□ -0.19
PDPN-209ENST00000510906 SCAPERQ9BY12 1400 aa13.84□□□□□ -0.19
PDPN-209ENST00000510906 REM2Q8IYK8 340 aaPredicted RBP13.84□□□□□ -0.19
PDPN-209ENST00000510906 CEP162Q5TB80 1403 aa13.83□□□□□ -0.2
PDPN-209ENST00000510906 BBXQ8WY36 941 aaPredicted RBP13.83□□□□□ -0.2
PDPN-209ENST00000510906 CIZ1Q9ULV3 898 aaPredicted RBP13.83□□□□□ -0.2
PDPN-209ENST00000510906 RICTORQ6R327 1708 aa13.82□□□□□ -0.2
PDPN-209ENST00000510906 POGZQ7Z3K3 1410 aa13.81□□□□□ -0.2
PDPN-209ENST00000510906 ARHGEF40Q8TER5 1519 aa13.81□□□□□ -0.2
PDPN-209ENST00000510906 LOC105371045A0A1W2PR82 267 aa13.81□□□□□ -0.2
PDPN-209ENST00000510906 MYO5CQ9NQX4 1742 aa13.81□□□□□ -0.2
PDPN-209ENST00000510906 YEATS2Q9ULM3 1422 aa13.81□□□□□ -0.2
PDPN-209ENST00000510906 ARHGAP5Q13017 1502 aa13.8□□□□□ -0.2
PDPN-209ENST00000510906 ZMYM4Q5VZL5 1548 aa13.8□□□□□ -0.2
PDPN-209ENST00000510906 NUBP1P53384 320 aa13.8□□□□□ -0.2
PDPN-209ENST00000510906 ARID4BQ4LE39 1312 aaPredicted RBP13.8□□□□□ -0.2
PDPN-209ENST00000510906 CREBZFQ9NS37 354 aa13.79□□□□□ -0.2
PDPN-209ENST00000510906 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
PDPN-209ENST00000510906 ZFYVE16Q7Z3T8 1539 aa13.78□□□□□ -0.2
PDPN-209ENST00000510906 MAGI2Q86UL8 1455 aa13.77□□□□□ -0.21
PDPN-209ENST00000510906 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
PDPN-209ENST00000510906 PRR29P0C7W0 189 aa13.76□□□□□ -0.21
PDPN-209ENST00000510906 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
PDPN-209ENST00000510906 AFAP1Q8N556 730 aa13.76□□□□□ -0.21
PDPN-209ENST00000510906 GSE1Q14687 1217 aa13.75□□□□□ -0.21
PDPN-209ENST00000510906 PREX2Q70Z35 1606 aa13.75□□□□□ -0.21
PDPN-209ENST00000510906 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.74□□□□□ -0.21
PDPN-209ENST00000510906 ADAMTSL3P82987 1691 aa13.74□□□□□ -0.21
PDPN-209ENST00000510906 ZNF518AQ6AHZ1 1483 aa13.74□□□□□ -0.21
PDPN-209ENST00000510906 CDC42BPBQ9Y5S2 1711 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms