RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-208ENST00000510676 MLECQ14165 292 aa19.06■□□□□ 0.64
PTCD2-208ENST00000510676 SETD1BQ9UPS6 1966 aaKnown RBP19.06■□□□□ 0.64
PTCD2-208ENST00000510676 CEBPAP49715 358 aaPredicted RBP19.04■□□□□ 0.64
PTCD2-208ENST00000510676 CFAP74Q9C0B2 1584 aa19.02■□□□□ 0.64
PTCD2-208ENST00000510676 HECW1Q76N89 1606 aa19■□□□□ 0.63
PTCD2-208ENST00000510676 FAM9AQ8IZU1 332 aaPredicted RBP18.99■□□□□ 0.63
PTCD2-208ENST00000510676 MED1Q15648 1581 aaPredicted RBP18.98■□□□□ 0.63
PTCD2-208ENST00000510676 ATP10AO60312 1499 aa18.98■□□□□ 0.63
PTCD2-208ENST00000510676 NCOA1Q15788 1441 aa18.98■□□□□ 0.63
PTCD2-208ENST00000510676 C9orf84Q5VXU9 1444 aa18.97■□□□□ 0.63
PTCD2-208ENST00000510676 UBAP1LF5GYI3 381 aa18.96■□□□□ 0.63
PTCD2-208ENST00000510676 RAPGEF6Q8TEU7 1601 aa18.92■□□□□ 0.62
PTCD2-208ENST00000510676 NUP153P49790 1475 aaKnown RBP18.92■□□□□ 0.62
PTCD2-208ENST00000510676 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.91■□□□□ 0.62
PTCD2-208ENST00000510676 SCAPERQ9BY12 1400 aa18.88■□□□□ 0.61
PTCD2-208ENST00000510676 TRAPPC8Q9Y2L5 1435 aa18.88■□□□□ 0.61
PTCD2-208ENST00000510676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.87■□□□□ 0.61
PTCD2-208ENST00000510676 HNRNPUL2Q1KMD3 747 aaKnown RBP18.87■□□□□ 0.61
PTCD2-208ENST00000510676 PRXQ9BXM0 1461 aa18.86■□□□□ 0.61
PTCD2-208ENST00000510676 P3H3Q8IVL6 736 aa18.86■□□□□ 0.61
PTCD2-208ENST00000510676 ZNF335Q9H4Z2 1342 aaPredicted RBP18.85■□□□□ 0.61
PTCD2-208ENST00000510676 PLEKHD1A6NEE1 506 aa18.85■□□□□ 0.61
PTCD2-208ENST00000510676 HSPA1LP34931 641 aa18.85■□□□□ 0.61
PTCD2-208ENST00000510676 C3P01024 1663 aa18.85■□□□□ 0.61
PTCD2-208ENST00000510676 SAMD9Q5K651 1589 aa18.85■□□□□ 0.61
PTCD2-208ENST00000510676 PLCH2O75038 1416 aa18.81■□□□□ 0.6
PTCD2-208ENST00000510676 REREQ9P2R6 1566 aa18.81■□□□□ 0.6
PTCD2-208ENST00000510676 CAMSAP1Q5T5Y3 1602 aa18.8■□□□□ 0.6
PTCD2-208ENST00000510676 AGLP35573 1532 aa18.76■□□□□ 0.59
PTCD2-208ENST00000510676 KDM5CP41229 1560 aa18.76■□□□□ 0.59
PTCD2-208ENST00000510676 NPATQ14207 1427 aa18.75■□□□□ 0.59
PTCD2-208ENST00000510676 ZNF518AQ6AHZ1 1483 aa18.75■□□□□ 0.59
PTCD2-208ENST00000510676 PLA2R1Q13018 1463 aa18.74■□□□□ 0.59
PTCD2-208ENST00000510676 NCKAP5LQ9HCH0 1330 aa18.74■□□□□ 0.59
PTCD2-208ENST00000510676 DIP2CQ9Y2E4 1556 aa18.73■□□□□ 0.59
PTCD2-208ENST00000510676 PKD2Q13563 968 aa18.73■□□□□ 0.59
PTCD2-208ENST00000510676 CNTLNQ9NXG0 1405 aa18.73■□□□□ 0.59
PTCD2-208ENST00000510676 TCOF1Q13428 1488 aaKnown RBP18.72■□□□□ 0.59
PTCD2-208ENST00000510676 TOM1O60784 492 aa18.69■□□□□ 0.58
PTCD2-208ENST00000510676 EFCAB2Q5VUJ9 269 aa18.69■□□□□ 0.58
PTCD2-208ENST00000510676 PIP4K2BP78356 416 aa18.68■□□□□ 0.58
PTCD2-208ENST00000510676 ESF1Q9H501 851 aaKnown RBP18.67■□□□□ 0.58
PTCD2-208ENST00000510676 MLH3Q9UHC1 1453 aa18.66■□□□□ 0.58
PTCD2-208ENST00000510676 AFAP1Q8N556 730 aa18.66■□□□□ 0.58
PTCD2-208ENST00000510676 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
PTCD2-208ENST00000510676 ABCA6Q8N139 1617 aa18.64■□□□□ 0.57
PTCD2-208ENST00000510676 CPS1P31327 1500 aa18.64■□□□□ 0.57
PTCD2-208ENST00000510676 ZNF142P52746 1687 aaPredicted RBP18.63■□□□□ 0.57
PTCD2-208ENST00000510676 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
PTCD2-208ENST00000510676 SRCAPQ6ZRS2 3230 aa18.63■□□□□ 0.57
PTCD2-208ENST00000510676 MROH2AA6NES4 1674 aa18.63■□□□□ 0.57
PTCD2-208ENST00000510676 RGS17Q9UGC6 210 aaPredicted RBP18.62■□□□□ 0.57
PTCD2-208ENST00000510676 ALKQ9UM73 1620 aa18.61■□□□□ 0.57
PTCD2-208ENST00000510676 MYO5CQ9NQX4 1742 aa18.6■□□□□ 0.57
PTCD2-208ENST00000510676 ZMYM3Q14202 1370 aa18.59■□□□□ 0.57
PTCD2-208ENST00000510676 PTPRKQ15262 1439 aa18.58■□□□□ 0.57
PTCD2-208ENST00000510676 POTEDQ86YR6 584 aa18.58■□□□□ 0.56
PTCD2-208ENST00000510676 CEP170BQ9Y4F5 1589 aaPredicted RBP18.58■□□□□ 0.56
PTCD2-208ENST00000510676 MYO3AQ8NEV4 1616 aa18.57■□□□□ 0.56
PTCD2-208ENST00000510676 CDK13Q14004 1512 aaKnown RBP18.57■□□□□ 0.56
PTCD2-208ENST00000510676 SHANK2Q9UPX8 1470 aa18.56■□□□□ 0.56
PTCD2-208ENST00000510676 MYT1LQ9UL68 1186 aa18.52■□□□□ 0.56
PTCD2-208ENST00000510676 ARHGAP5Q13017 1502 aa18.52■□□□□ 0.56
PTCD2-208ENST00000510676 SUPT6HQ7KZ85 1726 aaKnown RBP18.49■□□□□ 0.55
PTCD2-208ENST00000510676 KIDINS220Q9ULH0 1771 aa18.48■□□□□ 0.55
PTCD2-208ENST00000510676 NEURL4Q96JN8 1562 aa18.48■□□□□ 0.55
PTCD2-208ENST00000510676 KIF14Q15058 1648 aa18.48■□□□□ 0.55
PTCD2-208ENST00000510676 VWDEQ8N2E2 1590 aa18.47■□□□□ 0.55
PTCD2-208ENST00000510676 A2ML1A8K2U0 1454 aa18.46■□□□□ 0.55
PTCD2-208ENST00000510676 ABCC1P33527 1531 aa18.45■□□□□ 0.54
PTCD2-208ENST00000510676 POTEAQ6S8J7 498 aa18.44■□□□□ 0.54
PTCD2-208ENST00000510676 DNMT1P26358 1616 aaKnown RBP18.44■□□□□ 0.54
PTCD2-208ENST00000510676 MSH5O43196 834 aa18.43■□□□□ 0.54
PTCD2-208ENST00000510676 TROQ12816 1431 aaPredicted RBP18.42■□□□□ 0.54
PTCD2-208ENST00000510676 CDK11AQ9UQ88 783 aaPredicted RBP18.42■□□□□ 0.54
PTCD2-208ENST00000510676 POLR1AO95602 1720 aaPredicted RBP18.41■□□□□ 0.54
PTCD2-208ENST00000510676 PIAS4Q8N2W9 510 aaPredicted RBP18.41■□□□□ 0.54
PTCD2-208ENST00000510676 CLTCQ00610 1675 aaKnown RBP18.41■□□□□ 0.54
PTCD2-208ENST00000510676 ITSN2Q9NZM3 1697 aa18.4■□□□□ 0.54
PTCD2-208ENST00000510676 CDC42BPBQ9Y5S2 1711 aa18.4■□□□□ 0.54
PTCD2-208ENST00000510676 ADRA2BP18089 450 aa18.38■□□□□ 0.53
PTCD2-208ENST00000510676 RANGAP1P46060 587 aaPredicted RBP18.38■□□□□ 0.53
PTCD2-208ENST00000510676 CSRNP3Q8WYN3 585 aa18.38■□□□□ 0.53
PTCD2-208ENST00000510676 PLXNC1O60486 1568 aa18.38■□□□□ 0.53
PTCD2-208ENST00000510676 MED14O60244 1454 aa18.37■□□□□ 0.53
PTCD2-208ENST00000510676 RNF17Q9BXT8 1623 aaKnown RBP18.36■□□□□ 0.53
PTCD2-208ENST00000510676 SAMD9LQ8IVG5 1584 aa18.35■□□□□ 0.53
PTCD2-208ENST00000510676 LRRC7Q96NW7 1537 aa18.35■□□□□ 0.53
PTCD2-208ENST00000510676 PREX2Q70Z35 1606 aa18.34■□□□□ 0.53
PTCD2-208ENST00000510676 CLIP1P30622 1438 aa18.34■□□□□ 0.53
PTCD2-208ENST00000510676 DEPDC5O75140 1603 aa18.31■□□□□ 0.52
PTCD2-208ENST00000510676 ANKLE2Q86XL3 938 aa18.31■□□□□ 0.52
PTCD2-208ENST00000510676 SYNMO15061 1565 aa18.3■□□□□ 0.52
PTCD2-208ENST00000510676 NPHP4O75161 1426 aaPredicted RBP18.3■□□□□ 0.52
PTCD2-208ENST00000510676 FMN1Q68DA7 1419 aa18.3■□□□□ 0.52
PTCD2-208ENST00000510676 SETD1AO15047 1707 aaKnown RBP18.29■□□□□ 0.52
PTCD2-208ENST00000510676 A2MP01023 1474 aa18.28■□□□□ 0.52
PTCD2-208ENST00000510676 STRCP1A6NGW2 1772 aa18.28■□□□□ 0.52
PTCD2-208ENST00000510676 SPAG9O60271 1321 aaKnown RBP18.27■□□□□ 0.52
PTCD2-208ENST00000510676 TNRQ92752 1358 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms