RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 TTBK1Q5TCY1 1321 aaPredicted RBP15.73■□□□□ 0.11
NEK1-205ENST00000510108 ZCCHC11Q5TAX3 1644 aaKnown RBP15.73■□□□□ 0.11
NEK1-205ENST00000510108 CYB5RLQ6IPT4 315 aa15.72■□□□□ 0.11
NEK1-205ENST00000510108 TROQ12816 1431 aaPredicted RBP15.72■□□□□ 0.11
NEK1-205ENST00000510108 RRBP1Q9P2E9 1410 aaKnown RBP15.72■□□□□ 0.11
NEK1-205ENST00000510108 NCOA2Q15596 1464 aa15.7■□□□□ 0.1
NEK1-205ENST00000510108 PHLDB1Q86UU1 1377 aa15.69■□□□□ 0.1
NEK1-205ENST00000510108 CDK11AQ9UQ88 783 aaPredicted RBP15.68■□□□□ 0.1
NEK1-205ENST00000510108 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
NEK1-205ENST00000510108 KIF14Q15058 1648 aa15.67■□□□□ 0.1
NEK1-205ENST00000510108 ZNF219Q9P2Y4 722 aaPredicted RBP15.67■□□□□ 0.1
NEK1-205ENST00000510108 NPM1P06748 294 aaKnown RBP eCLIP15.66■□□□□ 0.1
NEK1-205ENST00000510108 MYOM3Q5VTT5 1437 aa15.64■□□□□ 0.09
NEK1-205ENST00000510108 ITSN2Q9NZM3 1697 aa15.63■□□□□ 0.09
NEK1-205ENST00000510108 ABCC10Q5T3U5 1492 aa15.63■□□□□ 0.09
NEK1-205ENST00000510108 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.62■□□□□ 0.09
NEK1-205ENST00000510108 FGD6Q6ZV73 1430 aa15.62■□□□□ 0.09
NEK1-205ENST00000510108 ARID3CA6NKF2 412 aa15.62■□□□□ 0.09
NEK1-205ENST00000510108 CCNB3Q8WWL7 1395 aa15.61■□□□□ 0.09
NEK1-205ENST00000510108 MIA2Q96PC5 1412 aa15.61■□□□□ 0.09
NEK1-205ENST00000510108 PLEKHD1A6NEE1 506 aa15.6■□□□□ 0.09
NEK1-205ENST00000510108 PCGF6Q9BYE7 350 aa15.6■□□□□ 0.09
NEK1-205ENST00000510108 TCOF1Q13428 1488 aaKnown RBP15.6■□□□□ 0.09
NEK1-205ENST00000510108 CDC42BPAQ5VT25 1732 aa15.58■□□□□ 0.09
NEK1-205ENST00000510108 WDR7Q9Y4E6 1490 aa15.58■□□□□ 0.08
NEK1-205ENST00000510108 PTPN23Q9H3S7 1636 aa15.58■□□□□ 0.08
NEK1-205ENST00000510108 PREX2Q70Z35 1606 aa15.56■□□□□ 0.08
NEK1-205ENST00000510108 MAPKBP1O60336 1514 aa15.56■□□□□ 0.08
NEK1-205ENST00000510108 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.56■□□□□ 0.08
NEK1-205ENST00000510108 GPATCH8Q9UKJ3 1502 aaKnown RBP15.56■□□□□ 0.08
NEK1-205ENST00000510108 TTC37Q6PGP7 1564 aa15.56■□□□□ 0.08
NEK1-205ENST00000510108 ASXL2Q76L83 1435 aa15.53■□□□□ 0.08
NEK1-205ENST00000510108 ABCA9Q8IUA7 1624 aa15.53■□□□□ 0.08
NEK1-205ENST00000510108 ARAP3Q8WWN8 1544 aa15.53■□□□□ 0.08
NEK1-205ENST00000510108 MYO5CQ9NQX4 1742 aa15.53■□□□□ 0.08
NEK1-205ENST00000510108 CDC42BPBQ9Y5S2 1711 aa15.51■□□□□ 0.07
NEK1-205ENST00000510108 DSG3P32926 999 aa15.48■□□□□ 0.07
NEK1-205ENST00000510108 CAMSAP2Q08AD1 1489 aa15.47■□□□□ 0.07
NEK1-205ENST00000510108 DNMT1P26358 1616 aaKnown RBP15.47■□□□□ 0.07
NEK1-205ENST00000510108 ABCB7O75027 752 aa15.45■□□□□ 0.06
NEK1-205ENST00000510108 CROCC2H7BZ55 1655 aa15.45■□□□□ 0.06
NEK1-205ENST00000510108 GLI2P10070 1586 aa15.45■□□□□ 0.06
NEK1-205ENST00000510108 SAMD9LQ8IVG5 1584 aa15.45■□□□□ 0.06
NEK1-205ENST00000510108 PLCH2O75038 1416 aa15.45■□□□□ 0.06
NEK1-205ENST00000510108 ARHGEF5Q12774 1597 aa15.43■□□□□ 0.06
NEK1-205ENST00000510108 POLA2Q14181 598 aa15.42■□□□□ 0.06
NEK1-205ENST00000510108 CFDP1Q9UEE9 299 aaPredicted RBP15.42■□□□□ 0.06
NEK1-205ENST00000510108 ARHGAP5Q13017 1502 aa15.41■□□□□ 0.06
NEK1-205ENST00000510108 AKNAQ7Z591 1439 aa15.41■□□□□ 0.06
NEK1-205ENST00000510108 FAM50AQ14320 339 aaKnown RBP15.41■□□□□ 0.06
NEK1-205ENST00000510108 PLEKHH2Q8IVE3 1493 aa15.4■□□□□ 0.06
NEK1-205ENST00000510108 DAPK1P53355 1430 aa15.4■□□□□ 0.06
NEK1-205ENST00000510108 DIP2BQ9P265 1576 aa15.4■□□□□ 0.06
NEK1-205ENST00000510108 SHANK2Q9UPX8 1470 aa15.4■□□□□ 0.06
NEK1-205ENST00000510108 MAP3K4Q9Y6R4 1608 aa15.39■□□□□ 0.05
NEK1-205ENST00000510108 PTPRKQ15262 1439 aa15.39■□□□□ 0.05
NEK1-205ENST00000510108 ABCC1P33527 1531 aa15.39■□□□□ 0.05
NEK1-205ENST00000510108 KIAA1107Q9UPP5 1409 aa15.39■□□□□ 0.05
NEK1-205ENST00000510108 CFAP74Q9C0B2 1584 aa15.38■□□□□ 0.05
NEK1-205ENST00000510108 GCC2Q8IWJ2 1684 aa15.38■□□□□ 0.05
NEK1-205ENST00000510108 MBD5Q9P267 1494 aa15.38■□□□□ 0.05
NEK1-205ENST00000510108 ABCC5O15440 1437 aa15.38■□□□□ 0.05
NEK1-205ENST00000510108 KCNH8Q96L42 1107 aa15.38■□□□□ 0.05
NEK1-205ENST00000510108 ADGBQ8N7X0 1667 aa15.37■□□□□ 0.05
NEK1-205ENST00000510108 ADGRL2O95490 1459 aa15.35■□□□□ 0.05
NEK1-205ENST00000510108 MAST1Q9Y2H9 1570 aa15.35■□□□□ 0.05
NEK1-205ENST00000510108 ZNF644Q9H582 1327 aaPredicted RBP15.35■□□□□ 0.05
NEK1-205ENST00000510108 HFM1A2PYH4 1435 aa15.35■□□□□ 0.05
NEK1-205ENST00000510108 SYCP2Q9BX26 1530 aa15.35■□□□□ 0.05
NEK1-205ENST00000510108 ROCK1Q13464 1354 aa15.35■□□□□ 0.05
NEK1-205ENST00000510108 CCDC141Q6ZP82 1450 aa15.35■□□□□ 0.05
NEK1-205ENST00000510108 FANCAO15360 1455 aa15.33■□□□□ 0.04
NEK1-205ENST00000510108 CD109Q6YHK3 1445 aa15.33■□□□□ 0.04
NEK1-205ENST00000510108 FAM69CQ0P6D2 419 aa15.32■□□□□ 0.04
NEK1-205ENST00000510108 EFCAB2Q5VUJ9 269 aa15.32■□□□□ 0.04
NEK1-205ENST00000510108 ARHGEF12Q9NZN5 1544 aa15.32■□□□□ 0.04
NEK1-205ENST00000510108 SETD5Q9C0A6 1442 aa15.31■□□□□ 0.04
NEK1-205ENST00000510108 KIF13AQ9H1H9 1805 aa15.31■□□□□ 0.04
NEK1-205ENST00000510108 NEO1Q92859 1461 aa15.3■□□□□ 0.04
NEK1-205ENST00000510108 RSPH4AQ5TD94 716 aa15.3■□□□□ 0.04
NEK1-205ENST00000510108 NAIPQ13075 1403 aa15.3■□□□□ 0.04
NEK1-205ENST00000510108 PLXNC1O60486 1568 aa15.29■□□□□ 0.04
NEK1-205ENST00000510108 ITGAEP38570 1179 aa15.29■□□□□ 0.04
NEK1-205ENST00000510108 PPRC1Q5VV67 1664 aaKnown RBP15.29■□□□□ 0.04
NEK1-205ENST00000510108 C9orf84Q5VXU9 1444 aa15.28■□□□□ 0.04
NEK1-205ENST00000510108 HRCP23327 699 aa15.28■□□□□ 0.04
NEK1-205ENST00000510108 ZNF777Q9ULD5 760 aaPredicted RBP15.28■□□□□ 0.04
NEK1-205ENST00000510108 RAB3GAP2Q9H2M9 1393 aa15.27■□□□□ 0.03
NEK1-205ENST00000510108 NCOA1Q15788 1441 aa15.27■□□□□ 0.03
NEK1-205ENST00000510108 ADGRL1O94910 1474 aa15.26■□□□□ 0.03
NEK1-205ENST00000510108 INO80Q9ULG1 1556 aaPredicted RBP15.25■□□□□ 0.03
NEK1-205ENST00000510108 ZFYVE16Q7Z3T8 1539 aa15.24■□□□□ 0.03
NEK1-205ENST00000510108 KDM5CP41229 1560 aa15.24■□□□□ 0.03
NEK1-205ENST00000510108 RTEL1-TNFRSF6BF6WH68 1400 aa15.23■□□□□ 0.03
NEK1-205ENST00000510108 TRAPPC8Q9Y2L5 1435 aa15.23■□□□□ 0.03
NEK1-205ENST00000510108 HNRNPMP52272 730 aaKnown RBP eCLIP15.22■□□□□ 0.03
NEK1-205ENST00000510108 ANKRD30AQ9BXX3 1397 aa15.22■□□□□ 0.03
NEK1-205ENST00000510108 TEX14Q8IWB6 1497 aa15.22■□□□□ 0.03
NEK1-205ENST00000510108 KDM6BO15054 1643 aa15.21■□□□□ 0.03
NEK1-205ENST00000510108 ZNF518AQ6AHZ1 1483 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms