RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 ZNF316A6NFI3 1004 aaPredicted RBP11.46□□□□□ -0.57
SSBP2-213ENST00000509743 ERCC6L2Q5T890 1561 aa11.45□□□□□ -0.58
SSBP2-213ENST00000509743 GCC2Q8IWJ2 1684 aa11.45□□□□□ -0.58
SSBP2-213ENST00000509743 ZNF644Q9H582 1327 aaPredicted RBP11.43□□□□□ -0.58
SSBP2-213ENST00000509743 ADGRL2O95490 1459 aa11.43□□□□□ -0.58
SSBP2-213ENST00000509743 SHANK2Q9UPX8 1470 aa11.43□□□□□ -0.58
SSBP2-213ENST00000509743 KDM5BQ9UGL1 1544 aa11.42□□□□□ -0.58
SSBP2-213ENST00000509743 RRP7BPQ9NSQ0 103 aa11.42□□□□□ -0.58
SSBP2-213ENST00000509743 CHIC2Q9UKJ5 165 aa11.42□□□□□ -0.58
SSBP2-213ENST00000509743 ANKRD30AQ9BXX3 1397 aa11.4□□□□□ -0.59
SSBP2-213ENST00000509743 ZNF777Q9ULD5 760 aaPredicted RBP11.39□□□□□ -0.59
SSBP2-213ENST00000509743 ARHGEF5Q12774 1597 aa11.38□□□□□ -0.59
SSBP2-213ENST00000509743 NCOA1Q15788 1441 aa11.38□□□□□ -0.59
SSBP2-213ENST00000509743 RSPH4AQ5TD94 716 aa11.38□□□□□ -0.59
SSBP2-213ENST00000509743 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
SSBP2-213ENST00000509743 PLEKHH2Q8IVE3 1493 aa11.38□□□□□ -0.59
SSBP2-213ENST00000509743 DIEXFQ68CQ4 756 aaKnown RBP11.37□□□□□ -0.59
SSBP2-213ENST00000509743 PREX2Q70Z35 1606 aa11.37□□□□□ -0.59
SSBP2-213ENST00000509743 C9orf84Q5VXU9 1444 aa11.36□□□□□ -0.59
SSBP2-213ENST00000509743 CCDC141Q6ZP82 1450 aa11.36□□□□□ -0.59
SSBP2-213ENST00000509743 KIAA1107Q9UPP5 1409 aa11.35□□□□□ -0.59
SSBP2-213ENST00000509743 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.35□□□□□ -0.59
SSBP2-213ENST00000509743 CDC42BPAQ5VT25 1732 aa11.35□□□□□ -0.59
SSBP2-213ENST00000509743 TRIM52Q96A61 297 aa11.35□□□□□ -0.59
SSBP2-213ENST00000509743 MBD5Q9P267 1494 aa11.35□□□□□ -0.59
SSBP2-213ENST00000509743 CROCC2H7BZ55 1655 aa11.35□□□□□ -0.59
SSBP2-213ENST00000509743 ZCCHC11Q5TAX3 1644 aaKnown RBP11.35□□□□□ -0.59
SSBP2-213ENST00000509743 ADGBQ8N7X0 1667 aa11.34□□□□□ -0.59
SSBP2-213ENST00000509743 TONSLQ96HA7 1378 aa11.34□□□□□ -0.59
SSBP2-213ENST00000509743 TSPY4P0CV99 314 aa11.34□□□□□ -0.59
SSBP2-213ENST00000509743 TSPY10P0CW01 314 aa11.34□□□□□ -0.59
SSBP2-213ENST00000509743 NEUROD1Q13562 356 aa11.34□□□□□ -0.59
SSBP2-213ENST00000509743 SIN3AQ96ST3 1273 aa11.34□□□□□ -0.59
SSBP2-213ENST00000509743 ARHGAP5Q13017 1502 aa11.34□□□□□ -0.59
SSBP2-213ENST00000509743 PLCH2O75038 1416 aa11.34□□□□□ -0.59
SSBP2-213ENST00000509743 TTC37Q6PGP7 1564 aa11.33□□□□□ -0.6
SSBP2-213ENST00000509743 KDM6BO15054 1643 aa11.33□□□□□ -0.6
SSBP2-213ENST00000509743 ARAP3Q8WWN8 1544 aa11.33□□□□□ -0.6
SSBP2-213ENST00000509743 SAMD9LQ8IVG5 1584 aa11.33□□□□□ -0.6
SSBP2-213ENST00000509743 MPHOSPH9Q99550 1183 aa11.32□□□□□ -0.6
SSBP2-213ENST00000509743 ANKRD50Q9ULJ7 1429 aa11.32□□□□□ -0.6
SSBP2-213ENST00000509743 WDR7Q9Y4E6 1490 aa11.32□□□□□ -0.6
SSBP2-213ENST00000509743 DENND4BO75064 1496 aaPredicted RBP11.31□□□□□ -0.6
SSBP2-213ENST00000509743 MAST1Q9Y2H9 1570 aa11.3□□□□□ -0.6
SSBP2-213ENST00000509743 PPP1R15AO75807 674 aaPredicted RBP11.3□□□□□ -0.6
SSBP2-213ENST00000509743 EFCAB2Q5VUJ9 269 aa11.3□□□□□ -0.6
SSBP2-213ENST00000509743 KIF15Q9NS87 1388 aa11.29□□□□□ -0.6
SSBP2-213ENST00000509743 HNRNPMP52272 730 aaKnown RBP eCLIP11.29□□□□□ -0.61e-6■■■■□ 22.8
SSBP2-213ENST00000509743 SYCP2Q9BX26 1530 aa11.29□□□□□ -0.6
SSBP2-213ENST00000509743 KCNH8Q96L42 1107 aa11.28□□□□□ -0.6
SSBP2-213ENST00000509743 SLC4A1APQ9BWU0 796 aaKnown RBP11.28□□□□□ -0.6
SSBP2-213ENST00000509743 PZPP20742 1482 aa11.27□□□□□ -0.6
SSBP2-213ENST00000509743 KDM5DQ9BY66 1539 aa11.27□□□□□ -0.61
SSBP2-213ENST00000509743 ANKRD30BQ9BXX2 1392 aa11.27□□□□□ -0.61
SSBP2-213ENST00000509743 MYO5CQ9NQX4 1742 aa11.26□□□□□ -0.61
SSBP2-213ENST00000509743 CDC42BPBQ9Y5S2 1711 aa11.26□□□□□ -0.61
SSBP2-213ENST00000509743 ABCC1P33527 1531 aa11.25□□□□□ -0.61
SSBP2-213ENST00000509743 NPM1P06748 294 aaKnown RBP eCLIP11.25□□□□□ -0.61
SSBP2-213ENST00000509743 ASXL2Q76L83 1435 aa11.25□□□□□ -0.61
SSBP2-213ENST00000509743 RPRD2Q5VT52 1461 aaKnown RBP11.25□□□□□ -0.61
SSBP2-213ENST00000509743 PLXNC1O60486 1568 aa11.24□□□□□ -0.61
SSBP2-213ENST00000509743 ABCA9Q8IUA7 1624 aa11.23□□□□□ -0.61
SSBP2-213ENST00000509743 RTEL1-TNFRSF6BF6WH68 1400 aa11.22□□□□□ -0.61
SSBP2-213ENST00000509743 NUP155O75694 1391 aa11.22□□□□□ -0.61
SSBP2-213ENST00000509743 ERBINQ96RT1 1412 aa11.22□□□□□ -0.61
SSBP2-213ENST00000509743 ARHGEF12Q9NZN5 1544 aa11.22□□□□□ -0.61
SSBP2-213ENST00000509743 DUOX2Q9NRD8 1548 aa11.21□□□□□ -0.61
SSBP2-213ENST00000509743 FANCAO15360 1455 aa11.2□□□□□ -0.62
SSBP2-213ENST00000509743 PKD2Q13563 968 aa11.2□□□□□ -0.62
SSBP2-213ENST00000509743 TEX14Q8IWB6 1497 aa11.19□□□□□ -0.62
SSBP2-213ENST00000509743 TRAPPC8Q9Y2L5 1435 aa11.18□□□□□ -0.62
SSBP2-213ENST00000509743 FOXD1Q16676 465 aa11.18□□□□□ -0.62
SSBP2-213ENST00000509743 SPAG9O60271 1321 aaKnown RBP11.17□□□□□ -0.62
SSBP2-213ENST00000509743 UNC13BO14795 1591 aa11.17□□□□□ -0.62
SSBP2-213ENST00000509743 FAM135AQ9P2D6 1515 aa11.16□□□□□ -0.62
SSBP2-213ENST00000509743 L3MBTL2Q969R5 705 aa11.16□□□□□ -0.62
SSBP2-213ENST00000509743 ADGRL1O94910 1474 aa11.16□□□□□ -0.62
SSBP2-213ENST00000509743 MAGI2Q86UL8 1455 aa11.16□□□□□ -0.62
SSBP2-213ENST00000509743 ZFYVE16Q7Z3T8 1539 aa11.15□□□□□ -0.62
SSBP2-213ENST00000509743 SCAPERQ9BY12 1400 aa11.14□□□□□ -0.63
SSBP2-213ENST00000509743 CFAP74Q9C0B2 1584 aa11.14□□□□□ -0.63
SSBP2-213ENST00000509743 CD109Q6YHK3 1445 aa11.13□□□□□ -0.63
SSBP2-213ENST00000509743 MIER1Q8N108 512 aa11.13□□□□□ -0.63
SSBP2-213ENST00000509743 INO80Q9ULG1 1556 aaPredicted RBP11.12□□□□□ -0.63
SSBP2-213ENST00000509743 ATP7AQ04656 1500 aa11.12□□□□□ -0.63
SSBP2-213ENST00000509743 IQGAP3Q86VI3 1631 aa11.12□□□□□ -0.63
SSBP2-213ENST00000509743 ZNF518AQ6AHZ1 1483 aa11.12□□□□□ -0.63
SSBP2-213ENST00000509743 AFAP1Q8N556 730 aa11.11□□□□□ -0.63
SSBP2-213ENST00000509743 NEO1Q92859 1461 aa11.11□□□□□ -0.63
SSBP2-213ENST00000509743 EIF4G2P78344 907 aaKnown RBP eCLIP11.1□□□□□ -0.63
SSBP2-213ENST00000509743 ATP10AO60312 1499 aa11.1□□□□□ -0.63
SSBP2-213ENST00000509743 UHRF1BP1Q6BDS2 1440 aa11.09□□□□□ -0.63
SSBP2-213ENST00000509743 CENPBP07199 599 aaPredicted RBP11.09□□□□□ -0.63
SSBP2-213ENST00000509743 CCDC144AA2RUR9 1427 aa11.09□□□□□ -0.63
SSBP2-213ENST00000509743 POGZQ7Z3K3 1410 aa11.09□□□□□ -0.63
SSBP2-213ENST00000509743 KANK1Q14678 1352 aa11.08□□□□□ -0.64
SSBP2-213ENST00000509743 DHX29Q7Z478 1369 aaKnown RBP11.08□□□□□ -0.64
SSBP2-213ENST00000509743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.08□□□□□ -0.64
SSBP2-213ENST00000509743 HSPA5P11021 654 aaKnown RBP11.07□□□□□ -0.64
SSBP2-213ENST00000509743 MLH3Q9UHC1 1453 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms