RNA–Protein interactions for RNA: ENST00000509400.5

SIL1-212, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 4

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-212ENST00000509400 VPS8Q8N3P4 1428 aa17.95■□□□□ 0.46
SIL1-212ENST00000509400 ZMYM4Q5VZL5 1548 aa17.94■□□□□ 0.46
SIL1-212ENST00000509400 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
SIL1-212ENST00000509400 CFAP74Q9C0B2 1584 aa17.91■□□□□ 0.46
SIL1-212ENST00000509400 CDK13Q14004 1512 aaKnown RBP17.91■□□□□ 0.46
SIL1-212ENST00000509400 ZFYVE16Q7Z3T8 1539 aa17.91■□□□□ 0.46
SIL1-212ENST00000509400 HECW1Q76N89 1606 aa17.9■□□□□ 0.46
SIL1-212ENST00000509400 FYCO1Q9BQS8 1478 aa17.89■□□□□ 0.45
SIL1-212ENST00000509400 MLECQ14165 292 aa17.88■□□□□ 0.45
SIL1-212ENST00000509400 POGZQ7Z3K3 1410 aa17.87■□□□□ 0.45
SIL1-212ENST00000509400 FER1L4A9Z1Z3 1794 aa17.86■□□□□ 0.45
SIL1-212ENST00000509400 MAGI2Q86UL8 1455 aa17.86■□□□□ 0.45
SIL1-212ENST00000509400 SCAPERQ9BY12 1400 aa17.85■□□□□ 0.45
SIL1-212ENST00000509400 CDK11AQ9UQ88 783 aaPredicted RBP17.85■□□□□ 0.45
SIL1-212ENST00000509400 PLCH2O75038 1416 aa17.83■□□□□ 0.45
SIL1-212ENST00000509400 KANK4Q5T7N3 995 aaPredicted RBP17.83■□□□□ 0.44
SIL1-212ENST00000509400 CERKQ8TCT0 537 aa17.83■□□□□ 0.44
SIL1-212ENST00000509400 ARHGEF12Q9NZN5 1544 aa17.82■□□□□ 0.44
SIL1-212ENST00000509400 CCDC18Q5T9S5 1454 aa17.82■□□□□ 0.44
SIL1-212ENST00000509400 CEBPAP49715 358 aaPredicted RBP17.79■□□□□ 0.44
SIL1-212ENST00000509400 APLP2Q06481 763 aa17.79■□□□□ 0.44
SIL1-212ENST00000509400 ATP10AO60312 1499 aa17.79■□□□□ 0.44
SIL1-212ENST00000509400 TROQ12816 1431 aaPredicted RBP17.78■□□□□ 0.44
SIL1-212ENST00000509400 LRRIQ1Q96JM4 1722 aa17.78■□□□□ 0.44
SIL1-212ENST00000509400 C9orf84Q5VXU9 1444 aa17.77■□□□□ 0.44
SIL1-212ENST00000509400 KIF14Q15058 1648 aa17.76■□□□□ 0.43
SIL1-212ENST00000509400 PREX1Q8TCU6 1659 aa17.76■□□□□ 0.43
SIL1-212ENST00000509400 STRCQ7RTU9 1775 aa17.76■□□□□ 0.43
SIL1-212ENST00000509400 MYO5CQ9NQX4 1742 aa17.75■□□□□ 0.43
SIL1-212ENST00000509400 PPARGC1BQ86YN6 1023 aaKnown RBP17.75■□□□□ 0.43
SIL1-212ENST00000509400 MTUS2Q5JR59 1369 aa17.75■□□□□ 0.43
SIL1-212ENST00000509400 EFCAB2Q5VUJ9 269 aa17.74■□□□□ 0.43
SIL1-212ENST00000509400 AFAP1Q8N556 730 aa17.73■□□□□ 0.43
SIL1-212ENST00000509400 KDM5CP41229 1560 aa17.7■□□□□ 0.42
SIL1-212ENST00000509400 TIAM1Q13009 1591 aa17.7■□□□□ 0.42
SIL1-212ENST00000509400 MAP3K1Q13233 1512 aa17.7■□□□□ 0.42
SIL1-212ENST00000509400 ZNF518AQ6AHZ1 1483 aa17.69■□□□□ 0.42
SIL1-212ENST00000509400 LRRC9Q6ZRR7 1453 aa17.69■□□□□ 0.42
SIL1-212ENST00000509400 DIP2CQ9Y2E4 1556 aa17.69■□□□□ 0.42
SIL1-212ENST00000509400 ARHGAP5Q13017 1502 aa17.67■□□□□ 0.42
SIL1-212ENST00000509400 ILDR2Q71H61 639 aa17.67■□□□□ 0.42
SIL1-212ENST00000509400 ABCA6Q8N139 1617 aa17.66■□□□□ 0.42
SIL1-212ENST00000509400 CDC42BPBQ9Y5S2 1711 aa17.66■□□□□ 0.42
SIL1-212ENST00000509400 SETD1BQ9UPS6 1966 aaKnown RBP17.66■□□□□ 0.42
SIL1-212ENST00000509400 UHRF1BP1Q6BDS2 1440 aa17.65■□□□□ 0.42
SIL1-212ENST00000509400 C3P01024 1663 aa17.64■□□□□ 0.42
SIL1-212ENST00000509400 REREQ9P2R6 1566 aa17.64■□□□□ 0.41
SIL1-212ENST00000509400 TRAPPC8Q9Y2L5 1435 aa17.63■□□□□ 0.41
SIL1-212ENST00000509400 EHBP1L1Q8N3D4 1523 aa17.62■□□□□ 0.41
SIL1-212ENST00000509400 DMRT2Q9Y5R5 561 aa17.61■□□□□ 0.41
SIL1-212ENST00000509400 CCNB3Q8WWL7 1395 aa17.61■□□□□ 0.41
SIL1-212ENST00000509400 DISP3Q9P2K9 1392 aa17.61■□□□□ 0.41
SIL1-212ENST00000509400 NCOA2Q15596 1464 aa17.61■□□□□ 0.41
SIL1-212ENST00000509400 MLH3Q9UHC1 1453 aa17.61■□□□□ 0.41
SIL1-212ENST00000509400 MYT1LQ9UL68 1186 aa17.6■□□□□ 0.41
SIL1-212ENST00000509400 ABCC1P33527 1531 aa17.59■□□□□ 0.41
SIL1-212ENST00000509400 GPATCH8Q9UKJ3 1502 aaKnown RBP17.59■□□□□ 0.41
SIL1-212ENST00000509400 PREX2Q70Z35 1606 aa17.58■□□□□ 0.41
SIL1-212ENST00000509400 AGLP35573 1532 aa17.58■□□□□ 0.41
SIL1-212ENST00000509400 PTPRTO14522 1441 aa17.58■□□□□ 0.41
SIL1-212ENST00000509400 CFDP1Q9UEE9 299 aaPredicted RBP17.58■□□□□ 0.4
SIL1-212ENST00000509400 ZNF777Q9ULD5 760 aaPredicted RBP17.58■□□□□ 0.4
SIL1-212ENST00000509400 KIDINS220Q9ULH0 1771 aa17.58■□□□□ 0.4
SIL1-212ENST00000509400 LTBP4Q8N2S1 1624 aa17.58■□□□□ 0.4
SIL1-212ENST00000509400 ITSN2Q9NZM3 1697 aa17.57■□□□□ 0.4
SIL1-212ENST00000509400 ZNF644Q9H582 1327 aaPredicted RBP17.56■□□□□ 0.4
SIL1-212ENST00000509400 CDC42BPAQ5VT25 1732 aa17.53■□□□□ 0.4
SIL1-212ENST00000509400 SOCS7O14512 581 aa17.53■□□□□ 0.4
SIL1-212ENST00000509400 NCOA1Q15788 1441 aa17.53■□□□□ 0.4
SIL1-212ENST00000509400 HNRNPMP52272 730 aaKnown RBP eCLIP17.5■□□□□ 0.397e-7■■■■□ 23.6
SIL1-212ENST00000509400 SUPT6HQ7KZ85 1726 aaKnown RBP17.5■□□□□ 0.39
SIL1-212ENST00000509400 SPATA31D1Q6ZQQ2 1576 aa17.49■□□□□ 0.39
SIL1-212ENST00000509400 SAMD9LQ8IVG5 1584 aa17.49■□□□□ 0.39
SIL1-212ENST00000509400 ESF1Q9H501 851 aaKnown RBP17.49■□□□□ 0.39
SIL1-212ENST00000509400 MYOM3Q5VTT5 1437 aa17.48■□□□□ 0.39
SIL1-212ENST00000509400 CAMSAP1Q5T5Y3 1602 aa17.48■□□□□ 0.39
SIL1-212ENST00000509400 CNTLNQ9NXG0 1405 aa17.47■□□□□ 0.39
SIL1-212ENST00000509400 MROH2AA6NES4 1674 aa17.46■□□□□ 0.39
SIL1-212ENST00000509400 IQSEC2Q5JU85 1478 aa17.45■□□□□ 0.38
SIL1-212ENST00000509400 ZMYM3Q14202 1370 aa17.45■□□□□ 0.38
SIL1-212ENST00000509400 SYCP2Q9BX26 1530 aa17.45■□□□□ 0.38
SIL1-212ENST00000509400 NPATQ14207 1427 aa17.45■□□□□ 0.38
SIL1-212ENST00000509400 NCKAP5LQ9HCH0 1330 aa17.45■□□□□ 0.38
SIL1-212ENST00000509400 MIA2Q96PC5 1412 aa17.43■□□□□ 0.38
SIL1-212ENST00000509400 ZNF335Q9H4Z2 1342 aaPredicted RBP17.43■□□□□ 0.38
SIL1-212ENST00000509400 FGD6Q6ZV73 1430 aa17.42■□□□□ 0.38
SIL1-212ENST00000509400 CLTCQ00610 1675 aaKnown RBP17.42■□□□□ 0.38
SIL1-212ENST00000509400 FAM50AQ14320 339 aaKnown RBP17.41■□□□□ 0.38
SIL1-212ENST00000509400 SPAG9O60271 1321 aaKnown RBP17.41■□□□□ 0.38
SIL1-212ENST00000509400 PLXNC1O60486 1568 aa17.4■□□□□ 0.38
SIL1-212ENST00000509400 KIAA1107Q9UPP5 1409 aa17.4■□□□□ 0.38
SIL1-212ENST00000509400 ATP7AQ04656 1500 aa17.39■□□□□ 0.37
SIL1-212ENST00000509400 INO80Q9ULG1 1556 aaPredicted RBP17.39■□□□□ 0.37
SIL1-212ENST00000509400 MYO3AQ8NEV4 1616 aa17.39■□□□□ 0.37
SIL1-212ENST00000509400 ZNF142P52746 1687 aaPredicted RBP17.39■□□□□ 0.37
SIL1-212ENST00000509400 MBD5Q9P267 1494 aa17.38■□□□□ 0.37
SIL1-212ENST00000509400 PTPRKQ15262 1439 aa17.38■□□□□ 0.37
SIL1-212ENST00000509400 CAMSAP2Q08AD1 1489 aa17.37■□□□□ 0.37
SIL1-212ENST00000509400 A2MP01023 1474 aa17.36■□□□□ 0.37
SIL1-212ENST00000509400 TCOF1Q13428 1488 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms