RNA–Protein interactions for RNA: ENST00000509176.5

CCSER1-209, Transcript of coiled-coil serine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCSER1, Length 5,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-209ENST00000509176 GTF2E1P29083 439 aaPredicted RBP14.18□□□□□ -0.14
CCSER1-209ENST00000509176 TDRD9Q8NDG6 1382 aaKnown RBP14.17□□□□□ -0.14
CCSER1-209ENST00000509176 WASHC2CQ9Y4E1 1318 aa14.17□□□□□ -0.14
CCSER1-209ENST00000509176 LTV1Q96GA3 475 aaPredicted RBP14.17□□□□□ -0.14
CCSER1-209ENST00000509176 CHMP3Q9Y3E7 222 aa14.17□□□□□ -0.14
CCSER1-209ENST00000509176 EVA1CP58658 441 aa14.15□□□□□ -0.14
CCSER1-209ENST00000509176 TAF7LQ5H9L4 462 aa14.15□□□□□ -0.14
CCSER1-209ENST00000509176 KLHL34Q8N239 644 aa14.15□□□□□ -0.14
CCSER1-209ENST00000509176 RGS3P49796 1198 aa14.15□□□□□ -0.14
CCSER1-209ENST00000509176 APBB1O00213 710 aa14.14□□□□□ -0.15
CCSER1-209ENST00000509176 PKD2Q13563 968 aa14.14□□□□□ -0.15
CCSER1-209ENST00000509176 CEP164Q9UPV0 1460 aa14.14□□□□□ -0.15
CCSER1-209ENST00000509176 MS4A1P11836 297 aa14.13□□□□□ -0.15
CCSER1-209ENST00000509176 PTMAP06454 111 aaKnown RBP14.12□□□□□ -0.15
CCSER1-209ENST00000509176 PLCB2Q00722 1185 aa14.12□□□□□ -0.15
CCSER1-209ENST00000509176 GORABQ5T7V8 394 aa14.12□□□□□ -0.15
CCSER1-209ENST00000509176 FHAD1B1AJZ9 1412 aa14.12□□□□□ -0.15
CCSER1-209ENST00000509176 MIER1Q8N108 512 aa14.12□□□□□ -0.15
CCSER1-209ENST00000509176 SOGA1O94964 1423 aa14.11□□□□□ -0.15
CCSER1-209ENST00000509176 OSCARQ8IYS5 282 aa14.11□□□□□ -0.15
CCSER1-209ENST00000509176 AMPHP49418 695 aa14.1□□□□□ -0.15
CCSER1-209ENST00000509176 DCAF1Q9Y4B6 1507 aa14.1□□□□□ -0.15
CCSER1-209ENST00000509176 FRAT2O75474 233 aaPredicted RBP14.1□□□□□ -0.15
CCSER1-209ENST00000509176 HNRNPMP52272 730 aaKnown RBP eCLIP14.1□□□□□ -0.15
CCSER1-209ENST00000509176 FOXD1Q16676 465 aa14.1□□□□□ -0.15
CCSER1-209ENST00000509176 SPAG9O60271 1321 aaKnown RBP14.09□□□□□ -0.15
CCSER1-209ENST00000509176 U2AF1L5P0DN76 240 aaPredicted RBP14.09□□□□□ -0.15
CCSER1-209ENST00000509176 U2AF1Q01081 240 aaKnown RBP eCLIP14.09□□□□□ -0.15
CCSER1-209ENST00000509176 GNL2Q13823 731 aaKnown RBP14.09□□□□□ -0.15
CCSER1-209ENST00000509176 DDRGK1Q96HY6 314 aa14.09□□□□□ -0.15
CCSER1-209ENST00000509176 DCAF8L1A6NGE4 600 aa14.08□□□□□ -0.16
CCSER1-209ENST00000509176 TRIM44Q96DX7 344 aaPredicted RBP14.07□□□□□ -0.16
CCSER1-209ENST00000509176 GOLGA6L4A6NEF3 574 aa14.06□□□□□ -0.16
CCSER1-209ENST00000509176 AMER1Q5JTC6 1135 aaPredicted RBP14.06□□□□□ -0.16
CCSER1-209ENST00000509176 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.05□□□□□ -0.16
CCSER1-209ENST00000509176 HSP90AB1P08238 724 aaKnown RBP14.05□□□□□ -0.16
CCSER1-209ENST00000509176 NUP155O75694 1391 aa14.05□□□□□ -0.16
CCSER1-209ENST00000509176 BAZ1AQ9NRL2 1556 aaPredicted RBP14.04□□□□□ -0.16
CCSER1-209ENST00000509176 STK31Q9BXU1 1019 aa14.04□□□□□ -0.16
CCSER1-209ENST00000509176 SYTL4Q96C24 671 aaPredicted RBP14.03□□□□□ -0.16
CCSER1-209ENST00000509176 TERF2IPQ9NYB0 399 aa14.03□□□□□ -0.16
CCSER1-209ENST00000509176 JPH4Q96JJ6 628 aa14.02□□□□□ -0.16
CCSER1-209ENST00000509176 SUPT16HQ9Y5B9 1047 aaKnown RBP14.02□□□□□ -0.16
CCSER1-209ENST00000509176 MCCP23508 829 aa14.02□□□□□ -0.17
CCSER1-209ENST00000509176 DNTTIP2Q5QJE6 756 aaKnown RBP14.02□□□□□ -0.17
CCSER1-209ENST00000509176 TNIKQ9UKE5 1360 aa14.02□□□□□ -0.17
CCSER1-209ENST00000509176 FAM69CQ0P6D2 419 aa14.02□□□□□ -0.17
CCSER1-209ENST00000509176 KIAA1211Q6ZU35 1233 aa14.01□□□□□ -0.17
CCSER1-209ENST00000509176 CALD1Q05682 793 aaKnown RBP14□□□□□ -0.17
CCSER1-209ENST00000509176 PRM3Q9NNZ6 103 aa14□□□□□ -0.17
CCSER1-209ENST00000509176 ROCK2O75116 1388 aaKnown RBP14□□□□□ -0.17
CCSER1-209ENST00000509176 ANP32EQ9BTT0 268 aa13.99□□□□□ -0.17
CCSER1-209ENST00000509176 CHMP4AQ9BY43 222 aa13.99□□□□□ -0.17
CCSER1-209ENST00000509176 GOLGA6L6A8MZA4 724 aa13.99□□□□□ -0.17
CCSER1-209ENST00000509176 ANKRD30AQ9BXX3 1397 aa13.98□□□□□ -0.17
CCSER1-209ENST00000509176 TRAK1Q9UPV9 953 aa13.98□□□□□ -0.17
CCSER1-209ENST00000509176 IPO8O15397 1037 aaKnown RBP13.98□□□□□ -0.17
CCSER1-209ENST00000509176 SLC4A10Q6U841 1118 aa13.98□□□□□ -0.17
CCSER1-209ENST00000509176 VPS53Q5VIR6 699 aa13.97□□□□□ -0.17
CCSER1-209ENST00000509176 TOMM22Q9NS69 142 aa13.97□□□□□ -0.17
CCSER1-209ENST00000509176 ARHGAP35Q9NRY4 1499 aa13.96□□□□□ -0.17
CCSER1-209ENST00000509176 C1orf141Q5JVX7 400 aa13.95□□□□□ -0.18
CCSER1-209ENST00000509176 EIF3AQ14152 1382 aaKnown RBP13.94□□□□□ -0.18
CCSER1-209ENST00000509176 ITPRIPQ8IWB1 547 aa13.94□□□□□ -0.18
CCSER1-209ENST00000509176 PSME1Q06323 249 aa13.93□□□□□ -0.18
CCSER1-209ENST00000509176 NRDCO43847 1150 aa13.93□□□□□ -0.18
CCSER1-209ENST00000509176 NGEFQ8N5V2 710 aa13.93□□□□□ -0.18
CCSER1-209ENST00000509176 KTN1Q86UP2 1357 aaKnown RBP13.93□□□□□ -0.18
CCSER1-209ENST00000509176 ATF3P18847 181 aa13.93□□□□□ -0.18
CCSER1-209ENST00000509176 FBXW7Q969H0 707 aa13.93□□□□□ -0.18
CCSER1-209ENST00000509176 B4GALNT3Q6L9W6 998 aa13.92□□□□□ -0.18
CCSER1-209ENST00000509176 RAD21O60216 631 aa13.91□□□□□ -0.18
CCSER1-209ENST00000509176 GPATCH3Q96I76 525 aa13.91□□□□□ -0.18
CCSER1-209ENST00000509176 MPHOSPH9Q99550 1183 aa13.91□□□□□ -0.18
CCSER1-209ENST00000509176 HDAC5Q9UQL6 1122 aa13.91□□□□□ -0.18
CCSER1-209ENST00000509176 HSPA5P11021 654 aaKnown RBP13.91□□□□□ -0.18
CCSER1-209ENST00000509176 SPRYD3Q8NCJ5 442 aa13.9□□□□□ -0.18
CCSER1-209ENST00000509176 MARCH6O60337 910 aa13.89□□□□□ -0.19
CCSER1-209ENST00000509176 HSCBQ8IWL3 235 aa13.89□□□□□ -0.19
CCSER1-209ENST00000509176 RASSF8Q8NHQ8 419 aa13.89□□□□□ -0.19
CCSER1-209ENST00000509176 TTC5Q8N0Z6 440 aa13.89□□□□□ -0.19
CCSER1-209ENST00000509176 TRIM34Q9BYJ4 488 aa13.89□□□□□ -0.19
CCSER1-209ENST00000509176 CWC22Q9HCG8 908 aaKnown RBP13.89□□□□□ -0.19
CCSER1-209ENST00000509176 CTDP1Q9Y5B0 961 aaPredicted RBP13.89□□□□□ -0.19
CCSER1-209ENST00000509176 TRIM6-TRIM34B2RNG4 842 aa13.88□□□□□ -0.19
CCSER1-209ENST00000509176 PPP1R1BQ9UD71 204 aaPredicted RBP13.88□□□□□ -0.19
CCSER1-209ENST00000509176 HSP90B1P14625 803 aaKnown RBP13.88□□□□□ -0.19
CCSER1-209ENST00000509176 PDE4CQ08493 712 aa13.88□□□□□ -0.19
CCSER1-209ENST00000509176 RSPH4AQ5TD94 716 aa13.88□□□□□ -0.19
CCSER1-209ENST00000509176 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
CCSER1-209ENST00000509176 KRI1Q8N9T8 703 aaKnown RBP13.88□□□□□ -0.19
CCSER1-209ENST00000509176 FMN1Q68DA7 1419 aa13.88□□□□□ -0.19
CCSER1-209ENST00000509176 COG3Q96JB2 828 aa13.87□□□□□ -0.19
CCSER1-209ENST00000509176 SF3B2Q13435 895 aaKnown RBP13.87□□□□□ -0.19
CCSER1-209ENST00000509176 PTPRGP23470 1445 aa13.87□□□□□ -0.19
CCSER1-209ENST00000509176 TEFQ10587 303 aa13.87□□□□□ -0.19
CCSER1-209ENST00000509176 MINK1Q8N4C8 1332 aaPredicted RBP13.86□□□□□ -0.19
CCSER1-209ENST00000509176 SMC4Q9NTJ3 1288 aa13.85□□□□□ -0.19
CCSER1-209ENST00000509176 KIAA2012Q0VF49 1180 aa13.85□□□□□ -0.19
CCSER1-209ENST00000509176 VGFO15240 615 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms