RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 MTUS2Q5JR59 1369 aa13.52□□□□□ -0.25
USP46-207ENST00000508499 MAP3K4Q9Y6R4 1608 aa13.51□□□□□ -0.25
USP46-207ENST00000508499 ATP1B4Q9UN42 357 aaPredicted RBP13.51□□□□□ -0.25
USP46-207ENST00000508499 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.5□□□□□ -0.25
USP46-207ENST00000508499 ITSN2Q9NZM3 1697 aa13.5□□□□□ -0.25
USP46-207ENST00000508499 CDC42BPAQ5VT25 1732 aa13.49□□□□□ -0.25
USP46-207ENST00000508499 MYO5CQ9NQX4 1742 aa13.49□□□□□ -0.25
USP46-207ENST00000508499 TTC37Q6PGP7 1564 aa13.48□□□□□ -0.25
USP46-207ENST00000508499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.47□□□□□ -0.25
USP46-207ENST00000508499 HNRNPUL2Q1KMD3 747 aaKnown RBP13.47□□□□□ -0.25
USP46-207ENST00000508499 KANK4Q5T7N3 995 aaPredicted RBP13.47□□□□□ -0.25
USP46-207ENST00000508499 PREX2Q70Z35 1606 aa13.47□□□□□ -0.25
USP46-207ENST00000508499 NCOA2Q15596 1464 aa13.47□□□□□ -0.25
USP46-207ENST00000508499 CDC42BPBQ9Y5S2 1711 aa13.46□□□□□ -0.25
USP46-207ENST00000508499 U3KPZ7 1027 aaPredicted RBP13.46□□□□□ -0.26
USP46-207ENST00000508499 ARID3CA6NKF2 412 aa13.45□□□□□ -0.26
USP46-207ENST00000508499 PPRC1Q5VV67 1664 aaKnown RBP13.43□□□□□ -0.26
USP46-207ENST00000508499 CFAP74Q9C0B2 1584 aa13.43□□□□□ -0.26
USP46-207ENST00000508499 GPATCH8Q9UKJ3 1502 aaKnown RBP13.43□□□□□ -0.26
USP46-207ENST00000508499 CAPN15O75808 1086 aa13.42□□□□□ -0.26
USP46-207ENST00000508499 PLCH2O75038 1416 aa13.42□□□□□ -0.26
USP46-207ENST00000508499 MIA2Q96PC5 1412 aa13.42□□□□□ -0.26
USP46-207ENST00000508499 MYOM3Q5VTT5 1437 aa13.41□□□□□ -0.26
USP46-207ENST00000508499 SPINK5Q9NQ38 1064 aaPredicted RBP13.4□□□□□ -0.26
USP46-207ENST00000508499 NPM3O75607 178 aaKnown RBP13.39□□□□□ -0.27
USP46-207ENST00000508499 CD109Q6YHK3 1445 aa13.39□□□□□ -0.27
USP46-207ENST00000508499 PHLDB1Q86UU1 1377 aa13.38□□□□□ -0.27
USP46-207ENST00000508499 CCNB3Q8WWL7 1395 aa13.38□□□□□ -0.27
USP46-207ENST00000508499 NEO1Q92859 1461 aa13.38□□□□□ -0.27
USP46-207ENST00000508499 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.37□□□□□ -0.27
USP46-207ENST00000508499 TEX14Q8IWB6 1497 aa13.37□□□□□ -0.27
USP46-207ENST00000508499 KCNH8Q96L42 1107 aa13.37□□□□□ -0.27
USP46-207ENST00000508499 TCOF1Q13428 1488 aaKnown RBP13.36□□□□□ -0.27
USP46-207ENST00000508499 RRBP1Q9P2E9 1410 aaKnown RBP13.36□□□□□ -0.27
USP46-207ENST00000508499 FAM69CQ0P6D2 419 aa13.36□□□□□ -0.27
USP46-207ENST00000508499 FGD6Q6ZV73 1430 aa13.35□□□□□ -0.27
USP46-207ENST00000508499 PLEKHH2Q8IVE3 1493 aa13.35□□□□□ -0.27
USP46-207ENST00000508499 PTPN23Q9H3S7 1636 aa13.35□□□□□ -0.27
USP46-207ENST00000508499 ARHGAP5Q13017 1502 aa13.35□□□□□ -0.27
USP46-207ENST00000508499 TSPOAP1O95153 1857 aa13.34□□□□□ -0.27
USP46-207ENST00000508499 SAMD9LQ8IVG5 1584 aa13.34□□□□□ -0.27
USP46-207ENST00000508499 FANCAO15360 1455 aa13.34□□□□□ -0.27
USP46-207ENST00000508499 KIAA1107Q9UPP5 1409 aa13.34□□□□□ -0.27
USP46-207ENST00000508499 ABCC1P33527 1531 aa13.33□□□□□ -0.28
USP46-207ENST00000508499 ARHGEF5Q12774 1597 aa13.33□□□□□ -0.28
USP46-207ENST00000508499 EFCAB2Q5VUJ9 269 aa13.3□□□□□ -0.28
USP46-207ENST00000508499 CAMSAP2Q08AD1 1489 aa13.3□□□□□ -0.28
USP46-207ENST00000508499 CFDP1Q9UEE9 299 aaPredicted RBP13.3□□□□□ -0.28
USP46-207ENST00000508499 CROCC2H7BZ55 1655 aa13.29□□□□□ -0.28
USP46-207ENST00000508499 DNMT1P26358 1616 aaKnown RBP13.29□□□□□ -0.28
USP46-207ENST00000508499 AKNAQ7Z591 1439 aa13.29□□□□□ -0.28
USP46-207ENST00000508499 RICTORQ6R327 1708 aa13.29□□□□□ -0.28
USP46-207ENST00000508499 MBD5Q9P267 1494 aa13.28□□□□□ -0.28
USP46-207ENST00000508499 KDM5CP41229 1560 aa13.27□□□□□ -0.29
USP46-207ENST00000508499 RSPH4AQ5TD94 716 aa13.27□□□□□ -0.29
USP46-207ENST00000508499 ADGRL1O94910 1474 aa13.26□□□□□ -0.29
USP46-207ENST00000508499 SHANK2Q9UPX8 1470 aa13.26□□□□□ -0.29
USP46-207ENST00000508499 SYCP2Q9BX26 1530 aa13.26□□□□□ -0.29
USP46-207ENST00000508499 MAST1Q9Y2H9 1570 aa13.25□□□□□ -0.29
USP46-207ENST00000508499 ZNF518AQ6AHZ1 1483 aa13.25□□□□□ -0.29
USP46-207ENST00000508499 ZMYM4Q5VZL5 1548 aa13.25□□□□□ -0.29
USP46-207ENST00000508499 ARHGEF12Q9NZN5 1544 aa13.25□□□□□ -0.29
USP46-207ENST00000508499 TRHP20396 242 aaPredicted RBP13.24□□□□□ -0.29
USP46-207ENST00000508499 FRMPD1Q5SYB0 1578 aa13.23□□□□□ -0.29
USP46-207ENST00000508499 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
USP46-207ENST00000508499 POGZQ7Z3K3 1410 aa13.23□□□□□ -0.29
USP46-207ENST00000508499 PPARGC1BQ86YN6 1023 aaKnown RBP13.23□□□□□ -0.29
USP46-207ENST00000508499 DENND4BO75064 1496 aaPredicted RBP13.23□□□□□ -0.29
USP46-207ENST00000508499 ADGBQ8N7X0 1667 aa13.22□□□□□ -0.29
USP46-207ENST00000508499 INO80Q9ULG1 1556 aaPredicted RBP13.22□□□□□ -0.29
USP46-207ENST00000508499 SCAPERQ9BY12 1400 aa13.22□□□□□ -0.29
USP46-207ENST00000508499 MAGI2Q86UL8 1455 aa13.21□□□□□ -0.29
USP46-207ENST00000508499 RTEL1-TNFRSF6BF6WH68 1400 aa13.21□□□□□ -0.29
USP46-207ENST00000508499 DAPK1P53355 1430 aa13.21□□□□□ -0.29
USP46-207ENST00000508499 PLXNC1O60486 1568 aa13.2□□□□□ -0.3
USP46-207ENST00000508499 MLH3Q9UHC1 1453 aa13.2□□□□□ -0.3
USP46-207ENST00000508499 ZNF644Q9H582 1327 aaPredicted RBP13.2□□□□□ -0.3
USP46-207ENST00000508499 KDM6BO15054 1643 aa13.2□□□□□ -0.3
USP46-207ENST00000508499 HECW2Q9P2P5 1572 aa13.2□□□□□ -0.3
USP46-207ENST00000508499 ADGRL2O95490 1459 aa13.19□□□□□ -0.3
USP46-207ENST00000508499 ABCC5O15440 1437 aa13.19□□□□□ -0.3
USP46-207ENST00000508499 KIDINS220Q9ULH0 1771 aa13.19□□□□□ -0.3
USP46-207ENST00000508499 TRAPPC8Q9Y2L5 1435 aa13.19□□□□□ -0.3
USP46-207ENST00000508499 ZFYVE16Q7Z3T8 1539 aa13.18□□□□□ -0.3
USP46-207ENST00000508499 COL17A1Q9UMD9 1497 aaPredicted RBP13.18□□□□□ -0.3
USP46-207ENST00000508499 ROCK1Q13464 1354 aa13.17□□□□□ -0.3
USP46-207ENST00000508499 ZNF777Q9ULD5 760 aaPredicted RBP13.16□□□□□ -0.3
USP46-207ENST00000508499 REREQ9P2R6 1566 aa13.16□□□□□ -0.3
USP46-207ENST00000508499 ATP7AQ04656 1500 aa13.16□□□□□ -0.3
USP46-207ENST00000508499 TRIM26Q12899 539 aaPredicted RBP13.15□□□□□ -0.3
USP46-207ENST00000508499 C9orf84Q5VXU9 1444 aa13.15□□□□□ -0.31
USP46-207ENST00000508499 GCC2Q8IWJ2 1684 aa13.14□□□□□ -0.31
USP46-207ENST00000508499 HNRNPMP52272 730 aaKnown RBP eCLIP13.14□□□□□ -0.311e-7■■■□□ 14.8
USP46-207ENST00000508499 BCORL1Q5H9F3 1711 aa13.14□□□□□ -0.31
USP46-207ENST00000508499 PTPRKQ15262 1439 aa13.14□□□□□ -0.31
USP46-207ENST00000508499 FAM50AQ14320 339 aaKnown RBP13.13□□□□□ -0.31
USP46-207ENST00000508499 ARHGEF40Q8TER5 1519 aa13.13□□□□□ -0.31
USP46-207ENST00000508499 NCOA1Q15788 1441 aa13.12□□□□□ -0.31
USP46-207ENST00000508499 TSPY4P0CV99 314 aa13.12□□□□□ -0.31
USP46-207ENST00000508499 TSPY10P0CW01 314 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms