RNA–Protein interactions for RNA: ENST00000508383.1

SLF1-208, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 3

Gene SLF1, Length 328 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-208ENST00000508383 TTC37Q6PGP7 1564 aa12.4□□□□□ -0.42
SLF1-208ENST00000508383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.4□□□□□ -0.42
SLF1-208ENST00000508383 HNRNPUL2Q1KMD3 747 aaKnown RBP12.4□□□□□ -0.42
SLF1-208ENST00000508383 SPINK5Q9NQ38 1064 aaPredicted RBP12.4□□□□□ -0.42
SLF1-208ENST00000508383 PTPRMP28827 1452 aa12.4□□□□□ -0.43
SLF1-208ENST00000508383 RAPGEF3O95398 923 aa12.39□□□□□ -0.43
SLF1-208ENST00000508383 RANGAP1P46060 587 aaPredicted RBP12.39□□□□□ -0.43
SLF1-208ENST00000508383 RIMS1Q86UR5 1692 aaKnown RBP12.38□□□□□ -0.43
SLF1-208ENST00000508383 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.38□□□□□ -0.43
SLF1-208ENST00000508383 APLP2Q06481 763 aa12.38□□□□□ -0.43
SLF1-208ENST00000508383 SIGLEC1Q9BZZ2 1709 aa12.37□□□□□ -0.43
SLF1-208ENST00000508383 FANCAO15360 1455 aa12.35□□□□□ -0.43
SLF1-208ENST00000508383 CDK13Q14004 1512 aaKnown RBP12.35□□□□□ -0.43
SLF1-208ENST00000508383 ZMYM4Q5VZL5 1548 aa12.35□□□□□ -0.43
SLF1-208ENST00000508383 DENND4BO75064 1496 aaPredicted RBP12.34□□□□□ -0.43
SLF1-208ENST00000508383 AKNAQ7Z591 1439 aa12.34□□□□□ -0.43
SLF1-208ENST00000508383 PCF11O94913 1555 aaKnown RBP12.34□□□□□ -0.43
SLF1-208ENST00000508383 MYO5CQ9NQX4 1742 aa12.34□□□□□ -0.43
SLF1-208ENST00000508383 FER1L4A9Z1Z3 1794 aa12.33□□□□□ -0.44
SLF1-208ENST00000508383 PLEKHD1A6NEE1 506 aa12.32□□□□□ -0.44
SLF1-208ENST00000508383 HECW1Q76N89 1606 aa12.32□□□□□ -0.44
SLF1-208ENST00000508383 ARID4BQ4LE39 1312 aaPredicted RBP12.32□□□□□ -0.44
SLF1-208ENST00000508383 ZFYVE16Q7Z3T8 1539 aa12.32□□□□□ -0.44
SLF1-208ENST00000508383 LMTK3Q96Q04 1460 aa12.31□□□□□ -0.44
SLF1-208ENST00000508383 LRRIQ1Q96JM4 1722 aa12.31□□□□□ -0.44
SLF1-208ENST00000508383 YEATS2Q9ULM3 1422 aa12.28□□□□□ -0.44
SLF1-208ENST00000508383 KIF14Q15058 1648 aa12.28□□□□□ -0.44
SLF1-208ENST00000508383 POGZQ7Z3K3 1410 aa12.27□□□□□ -0.45
SLF1-208ENST00000508383 MAGI2Q86UL8 1455 aa12.27□□□□□ -0.45
SLF1-208ENST00000508383 ZNF219Q9P2Y4 722 aaPredicted RBP12.26□□□□□ -0.45
SLF1-208ENST00000508383 FMN1Q68DA7 1419 aa12.26□□□□□ -0.45
SLF1-208ENST00000508383 PLCH2O75038 1416 aa12.25□□□□□ -0.45
SLF1-208ENST00000508383 ARHGAP35Q9NRY4 1499 aa12.25□□□□□ -0.45
SLF1-208ENST00000508383 SCAPERQ9BY12 1400 aa12.24□□□□□ -0.45
SLF1-208ENST00000508383 CDC42BPBQ9Y5S2 1711 aa12.23□□□□□ -0.45
SLF1-208ENST00000508383 PREX1Q8TCU6 1659 aa12.23□□□□□ -0.45
SLF1-208ENST00000508383 FBXO41Q8TF61 875 aa12.23□□□□□ -0.45
SLF1-208ENST00000508383 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
SLF1-208ENST00000508383 ARHGEF12Q9NZN5 1544 aa12.21□□□□□ -0.45
SLF1-208ENST00000508383 UBTFP17480 764 aaKnown RBP12.21□□□□□ -0.45
SLF1-208ENST00000508383 KDM5CP41229 1560 aa12.21□□□□□ -0.46
SLF1-208ENST00000508383 ARHGAP5Q13017 1502 aa12.21□□□□□ -0.46
SLF1-208ENST00000508383 PREX2Q70Z35 1606 aa12.2□□□□□ -0.46
SLF1-208ENST00000508383 ATP1B4Q9UN42 357 aaPredicted RBP12.2□□□□□ -0.46
SLF1-208ENST00000508383 ZNF518AQ6AHZ1 1483 aa12.2□□□□□ -0.46
SLF1-208ENST00000508383 C9orf84Q5VXU9 1444 aa12.2□□□□□ -0.46
SLF1-208ENST00000508383 MLECQ14165 292 aa12.19□□□□□ -0.46
SLF1-208ENST00000508383 ATP10AO60312 1499 aa12.19□□□□□ -0.46
SLF1-208ENST00000508383 ITSN2Q9NZM3 1697 aa12.19□□□□□ -0.46
SLF1-208ENST00000508383 TROQ12816 1431 aaPredicted RBP12.19□□□□□ -0.46
SLF1-208ENST00000508383 ABCA6Q8N139 1617 aa12.19□□□□□ -0.46
SLF1-208ENST00000508383 DIP2CQ9Y2E4 1556 aa12.18□□□□□ -0.46
SLF1-208ENST00000508383 HSPA2P54652 639 aa12.18□□□□□ -0.46
SLF1-208ENST00000508383 CLIP1P30622 1438 aa12.18□□□□□ -0.46
SLF1-208ENST00000508383 CDK11AQ9UQ88 783 aaPredicted RBP12.17□□□□□ -0.46
SLF1-208ENST00000508383 CDC42BPAQ5VT25 1732 aa12.17□□□□□ -0.46
SLF1-208ENST00000508383 EFCAB2Q5VUJ9 269 aa12.16□□□□□ -0.46
SLF1-208ENST00000508383 REREQ9P2R6 1566 aa12.16□□□□□ -0.46
SLF1-208ENST00000508383 C3P01024 1663 aa12.15□□□□□ -0.46
SLF1-208ENST00000508383 ABCC1P33527 1531 aa12.15□□□□□ -0.46
SLF1-208ENST00000508383 STRCQ7RTU9 1775 aa12.14□□□□□ -0.47
SLF1-208ENST00000508383 CCDC18Q5T9S5 1454 aa12.14□□□□□ -0.47
SLF1-208ENST00000508383 KIDINS220Q9ULH0 1771 aa12.13□□□□□ -0.47
SLF1-208ENST00000508383 SETD1BQ9UPS6 1966 aaKnown RBP12.13□□□□□ -0.47
SLF1-208ENST00000508383 CASKIN1Q8WXD9 1431 aa12.11□□□□□ -0.47
SLF1-208ENST00000508383 MLH3Q9UHC1 1453 aa12.11□□□□□ -0.47
SLF1-208ENST00000508383 SLC4A2P04920 1241 aa12.11□□□□□ -0.47
SLF1-208ENST00000508383 AFAP1Q8N556 730 aa12.11□□□□□ -0.47
SLF1-208ENST00000508383 RBM42Q9BTD8 480 aaKnown RBP12.11□□□□□ -0.47
SLF1-208ENST00000508383 FYCO1Q9BQS8 1478 aa12.09□□□□□ -0.47
SLF1-208ENST00000508383 CEBPAP49715 358 aaPredicted RBP12.09□□□□□ -0.47
SLF1-208ENST00000508383 SAMD1Q6SPF0 538 aaPredicted RBP12.09□□□□□ -0.47
SLF1-208ENST00000508383 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
SLF1-208ENST00000508383 AGLP35573 1532 aa12.09□□□□□ -0.47
SLF1-208ENST00000508383 TRAPPC8Q9Y2L5 1435 aa12.09□□□□□ -0.47
SLF1-208ENST00000508383 UHRF1BP1Q6BDS2 1440 aa12.08□□□□□ -0.48
SLF1-208ENST00000508383 SAMD9LQ8IVG5 1584 aa12.08□□□□□ -0.48
SLF1-208ENST00000508383 MROH2AA6NES4 1674 aa12.06□□□□□ -0.48
SLF1-208ENST00000508383 SYCP2Q9BX26 1530 aa12.06□□□□□ -0.48
SLF1-208ENST00000508383 SUPT6HQ7KZ85 1726 aaKnown RBP12.06□□□□□ -0.48
SLF1-208ENST00000508383 ABCB7O75027 752 aa12.06□□□□□ -0.48
SLF1-208ENST00000508383 CERKQ8TCT0 537 aa12.06□□□□□ -0.48
SLF1-208ENST00000508383 INO80Q9ULG1 1556 aaPredicted RBP12.03□□□□□ -0.48
SLF1-208ENST00000508383 CLTCQ00610 1675 aaKnown RBP12.03□□□□□ -0.48
SLF1-208ENST00000508383 ATP7AQ04656 1500 aa12.01□□□□□ -0.49
SLF1-208ENST00000508383 CNTLNQ9NXG0 1405 aa12.01□□□□□ -0.49
SLF1-208ENST00000508383 GPATCH8Q9UKJ3 1502 aaKnown RBP12.01□□□□□ -0.49
SLF1-208ENST00000508383 PLXNC1O60486 1568 aa12.01□□□□□ -0.49
SLF1-208ENST00000508383 ZNF142P52746 1687 aaPredicted RBP12□□□□□ -0.49
SLF1-208ENST00000508383 ESF1Q9H501 851 aaKnown RBP12□□□□□ -0.49
SLF1-208ENST00000508383 MYO3AQ8NEV4 1616 aa12□□□□□ -0.49
SLF1-208ENST00000508383 ADGBQ8N7X0 1667 aa12□□□□□ -0.49
SLF1-208ENST00000508383 PTPRTO14522 1441 aa11.98□□□□□ -0.49
SLF1-208ENST00000508383 ZNF777Q9ULD5 760 aaPredicted RBP11.98□□□□□ -0.49
SLF1-208ENST00000508383 CAMSAP1Q5T5Y3 1602 aa11.97□□□□□ -0.49
SLF1-208ENST00000508383 TIAM1Q13009 1591 aa11.97□□□□□ -0.49
SLF1-208ENST00000508383 NCOA1Q15788 1441 aa11.97□□□□□ -0.49
SLF1-208ENST00000508383 LTBP4Q8N2S1 1624 aa11.97□□□□□ -0.49
SLF1-208ENST00000508383 PLEKHH2Q8IVE3 1493 aa11.96□□□□□ -0.49
SLF1-208ENST00000508383 SPAG9O60271 1321 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms