RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 CDK11AQ9UQ88 783 aaPredicted RBP15.38■□□□□ 0.05
LIN54-207ENST00000508171 HSPA5P11021 654 aaKnown RBP15.37■□□□□ 0.05
LIN54-207ENST00000508171 PRG4Q92954 1404 aaPredicted RBP15.37■□□□□ 0.05
LIN54-207ENST00000508171 DNMT1P26358 1616 aaKnown RBP15.36■□□□□ 0.05
LIN54-207ENST00000508171 CEP170Q5SW79 1584 aa15.35■□□□□ 0.05
LIN54-207ENST00000508171 PLB1Q6P1J6 1458 aa15.35■□□□□ 0.05
LIN54-207ENST00000508171 ROCK1Q13464 1354 aa15.35■□□□□ 0.05
LIN54-207ENST00000508171 WASHC2AQ641Q2 1341 aa15.34■□□□□ 0.05
LIN54-207ENST00000508171 MAGI1Q96QZ7 1491 aaPredicted RBP15.33■□□□□ 0.04
LIN54-207ENST00000508171 SYNJ2O15056 1496 aa15.32■□□□□ 0.04
LIN54-207ENST00000508171 JPH4Q96JJ6 628 aa15.32■□□□□ 0.04
LIN54-207ENST00000508171 CFDP1Q9UEE9 299 aaPredicted RBP15.32■□□□□ 0.04
LIN54-207ENST00000508171 ANKRD30BQ9BXX2 1392 aa15.32■□□□□ 0.04
LIN54-207ENST00000508171 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
LIN54-207ENST00000508171 ZNF777Q9ULD5 760 aaPredicted RBP15.31■□□□□ 0.04
LIN54-207ENST00000508171 TROQ12816 1431 aaPredicted RBP15.31■□□□□ 0.04
LIN54-207ENST00000508171 EIF4G2P78344 907 aaKnown RBP eCLIP15.31■□□□□ 0.04
LIN54-207ENST00000508171 BCANQ96GW7 911 aa15.3■□□□□ 0.04
LIN54-207ENST00000508171 FKBP8Q14318 412 aa15.3■□□□□ 0.04
LIN54-207ENST00000508171 NBPF8Q3BBV2 869 aa15.3■□□□□ 0.04
LIN54-207ENST00000508171 KIF14Q15058 1648 aa15.29■□□□□ 0.04
LIN54-207ENST00000508171 C11orf95C9JLR9 678 aaPredicted RBP15.29■□□□□ 0.04
LIN54-207ENST00000508171 GPATCH8Q9UKJ3 1502 aaKnown RBP15.28■□□□□ 0.04
LIN54-207ENST00000508171 CAMSAP2Q08AD1 1489 aa15.28■□□□□ 0.04
LIN54-207ENST00000508171 RPRD2Q5VT52 1461 aaKnown RBP15.28■□□□□ 0.04
LIN54-207ENST00000508171 NCOA1Q15788 1441 aa15.25■□□□□ 0.03
LIN54-207ENST00000508171 CARMIL2Q6F5E8 1435 aa15.25■□□□□ 0.03
LIN54-207ENST00000508171 NUP160Q12769 1436 aa15.25■□□□□ 0.03
LIN54-207ENST00000508171 TEX14Q8IWB6 1497 aa15.24■□□□□ 0.03
LIN54-207ENST00000508171 ITSN2Q9NZM3 1697 aa15.24■□□□□ 0.03
LIN54-207ENST00000508171 PZPP20742 1482 aa15.23■□□□□ 0.03
LIN54-207ENST00000508171 ADCY10Q96PN6 1610 aa15.22■□□□□ 0.03
LIN54-207ENST00000508171 PLEKHD1A6NEE1 506 aa15.21■□□□□ 0.03
LIN54-207ENST00000508171 TSHZ2Q9NRE2 1034 aa15.21■□□□□ 0.03
LIN54-207ENST00000508171 CCDC184Q52MB2 194 aa15.2■□□□□ 0.02
LIN54-207ENST00000508171 ADGBQ8N7X0 1667 aa15.2■□□□□ 0.02
LIN54-207ENST00000508171 HNRNPUQ00839 825 aaKnown RBP eCLIP15.2■□□□□ 0.02
LIN54-207ENST00000508171 CCDC7Q96M83 1385 aa15.2■□□□□ 0.02
LIN54-207ENST00000508171 ATP10BO94823 1461 aa15.19■□□□□ 0.02
LIN54-207ENST00000508171 CNTLNQ9NXG0 1405 aa15.19■□□□□ 0.02
LIN54-207ENST00000508171 CROCC2H7BZ55 1655 aa15.18■□□□□ 0.02
LIN54-207ENST00000508171 PKD2Q13563 968 aa15.18■□□□□ 0.02
LIN54-207ENST00000508171 CDC42BPAQ5VT25 1732 aa15.18■□□□□ 0.02
LIN54-207ENST00000508171 ABCA8O94911 1581 aa15.17■□□□□ 0.02
LIN54-207ENST00000508171 NEFLP07196 543 aa15.17■□□□□ 0.02
LIN54-207ENST00000508171 ADGRL2O95490 1459 aa15.17■□□□□ 0.02
LIN54-207ENST00000508171 SPATA31E1Q6ZUB1 1445 aa15.17■□□□□ 0.02
LIN54-207ENST00000508171 ANKRD30AQ9BXX3 1397 aa15.17■□□□□ 0.02
LIN54-207ENST00000508171 KIF7Q2M1P5 1343 aa15.15■□□□□ 0.02
LIN54-207ENST00000508171 ANKRD50Q9ULJ7 1429 aa15.15■□□□□ 0.02
LIN54-207ENST00000508171 KIAA1107Q9UPP5 1409 aa15.15■□□□□ 0.02
LIN54-207ENST00000508171 ZNF326Q5BKZ1 582 aaKnown RBP15.15■□□□□ 0.02
LIN54-207ENST00000508171 PRKRIP1Q9H875 184 aaPredicted RBP15.15■□□□□ 0.02
LIN54-207ENST00000508171 ABCC10Q5T3U5 1492 aa15.15■□□□□ 0.02
LIN54-207ENST00000508171 HNRNPMP52272 730 aaKnown RBP eCLIP15.13■□□□□ 0.01
LIN54-207ENST00000508171 NUP155O75694 1391 aa15.11■□□□□ 0.01
LIN54-207ENST00000508171 C9orf84Q5VXU9 1444 aa15.11■□□□□ 0.01
LIN54-207ENST00000508171 TSPY4P0CV99 314 aa15.1■□□□□ 0.01
LIN54-207ENST00000508171 TSPY10P0CW01 314 aa15.1■□□□□ 0.01
LIN54-207ENST00000508171 FAM9BQ8IZU0 186 aa15.1■□□□□ 0.01
LIN54-207ENST00000508171 POLR1AO95602 1720 aaPredicted RBP15.1■□□□□ 0.01
LIN54-207ENST00000508171 MBD5Q9P267 1494 aa15.1■□□□□ 0.01
LIN54-207ENST00000508171 PTPRGP23470 1445 aa15.09■□□□□ 0.01
LIN54-207ENST00000508171 MRS2Q9HD23 443 aa15.09■□□□□ 0.01
LIN54-207ENST00000508171 POLR3GLQ9BT43 218 aa15.07■□□□□ 0
LIN54-207ENST00000508171 IRX6P78412 446 aaPredicted RBP15.07■□□□□ 0
LIN54-207ENST00000508171 CNGB1Q14028 1251 aaPredicted RBP15.07■□□□□ 0
LIN54-207ENST00000508171 BCORL1Q5H9F3 1711 aa15.06■□□□□ 0
LIN54-207ENST00000508171 USP47Q96K76 1375 aa15.06■□□□□ 0
LIN54-207ENST00000508171 SHANK2Q9UPX8 1470 aa15.05■□□□□ 0
LIN54-207ENST00000508171 KIF15Q9NS87 1388 aa15.04■□□□□ -0
LIN54-207ENST00000508171 KDM2AQ9Y2K7 1162 aa15.04■□□□□ -0
LIN54-207ENST00000508171 CDC42BPBQ9Y5S2 1711 aa15.04■□□□□ -0
LIN54-207ENST00000508171 SAMD9LQ8IVG5 1584 aa15.01□□□□□ -0.01
LIN54-207ENST00000508171 CHD1O14646 1710 aa15.01□□□□□ -0.01
LIN54-207ENST00000508171 KDM5CP41229 1560 aa15.01□□□□□ -0.01
LIN54-207ENST00000508171 ARHGEF5Q12774 1597 aa15.01□□□□□ -0.01
LIN54-207ENST00000508171 DHX29Q7Z478 1369 aaKnown RBP15□□□□□ -0.01
LIN54-207ENST00000508171 DCAF11Q8TEB1 546 aa15□□□□□ -0.01
LIN54-207ENST00000508171 CARD11Q9BXL7 1154 aa15□□□□□ -0.01
LIN54-207ENST00000508171 UHRF1BP1Q6BDS2 1440 aa14.99□□□□□ -0.01
LIN54-207ENST00000508171 KDM5DQ9BY66 1539 aa14.99□□□□□ -0.01
LIN54-207ENST00000508171 PREX2Q70Z35 1606 aa14.98□□□□□ -0.01
LIN54-207ENST00000508171 CCDC141Q6ZP82 1450 aa14.98□□□□□ -0.01
LIN54-207ENST00000508171 ZBED9Q6R2W3 1325 aa14.97□□□□□ -0.01
LIN54-207ENST00000508171 RALGAPBQ86X10 1494 aa14.96□□□□□ -0.01
LIN54-207ENST00000508171 ST20-MTHFSA0A0A6YYL1 179 aa14.96□□□□□ -0.01
LIN54-207ENST00000508171 ERCC6L2Q5T890 1561 aa14.95□□□□□ -0.02
LIN54-207ENST00000508171 TTC37Q6PGP7 1564 aa14.95□□□□□ -0.02
LIN54-207ENST00000508171 FAM135AQ9P2D6 1515 aa14.95□□□□□ -0.02
LIN54-207ENST00000508171 RSPH4AQ5TD94 716 aa14.95□□□□□ -0.02
LIN54-207ENST00000508171 SYCP2Q9BX26 1530 aa14.94□□□□□ -0.02
LIN54-207ENST00000508171 ARHGEF12Q9NZN5 1544 aa14.94□□□□□ -0.02
LIN54-207ENST00000508171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.02
LIN54-207ENST00000508171 RBM19Q9Y4C8 960 aaKnown RBP14.94□□□□□ -0.02
LIN54-207ENST00000508171 ARID4BQ4LE39 1312 aaPredicted RBP14.93□□□□□ -0.02
LIN54-207ENST00000508171 ARHGAP5Q13017 1502 aa14.93□□□□□ -0.02
LIN54-207ENST00000508171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.93□□□□□ -0.02
LIN54-207ENST00000508171 RGL3Q3MIN7 710 aa14.93□□□□□ -0.02
LIN54-207ENST00000508171 SENP3-EIF4A1A0A087X0R7 540 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms