RNA–Protein interactions for RNA: ENST00000508139.1

FGFR4-210, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 5

Gene FGFR4, Length 720 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-210ENST00000508139 MAGI2Q86UL8 1455 aa28.96■■■□□ 2.23
FGFR4-210ENST00000508139 PREX1Q8TCU6 1659 aa28.93■■■□□ 2.22
FGFR4-210ENST00000508139 SCAPERQ9BY12 1400 aa28.91■■■□□ 2.22
FGFR4-210ENST00000508139 KIF14Q15058 1648 aa28.88■■■□□ 2.21
FGFR4-210ENST00000508139 PLCH2O75038 1416 aa28.87■■■□□ 2.21
FGFR4-210ENST00000508139 ARHGEF12Q9NZN5 1544 aa28.87■■■□□ 2.21
FGFR4-210ENST00000508139 C9orf84Q5VXU9 1444 aa28.84■■■□□ 2.21
FGFR4-210ENST00000508139 ATP10AO60312 1499 aa28.83■■■□□ 2.21
FGFR4-210ENST00000508139 LRRIQ1Q96JM4 1722 aa28.83■■■□□ 2.21
FGFR4-210ENST00000508139 CERKQ8TCT0 537 aa28.8■■■□□ 2.2
FGFR4-210ENST00000508139 ATP1B4Q9UN42 357 aaPredicted RBP28.8■■■□□ 2.2
FGFR4-210ENST00000508139 STRCQ7RTU9 1775 aa28.79■■■□□ 2.2
FGFR4-210ENST00000508139 EHMT2Q96KQ7 1210 aa28.78■■■□□ 2.2
FGFR4-210ENST00000508139 ARHGAP5Q13017 1502 aa28.76■■■□□ 2.19
FGFR4-210ENST00000508139 FMN1Q68DA7 1419 aa28.74■■■□□ 2.19
FGFR4-210ENST00000508139 KDM5CP41229 1560 aa28.74■■■□□ 2.19
FGFR4-210ENST00000508139 CDC42BPBQ9Y5S2 1711 aa28.74■■■□□ 2.19
FGFR4-210ENST00000508139 ZNF518AQ6AHZ1 1483 aa28.73■■■□□ 2.19
FGFR4-210ENST00000508139 EFCAB2Q5VUJ9 269 aa28.73■■■□□ 2.19
FGFR4-210ENST00000508139 DIP2CQ9Y2E4 1556 aa28.73■■■□□ 2.19
FGFR4-210ENST00000508139 SETD1BQ9UPS6 1966 aaKnown RBP28.73■■■□□ 2.19
FGFR4-210ENST00000508139 CEBPAP49715 358 aaPredicted RBP28.72■■■□□ 2.19
FGFR4-210ENST00000508139 ARHGAP35Q9NRY4 1499 aa28.72■■■□□ 2.19
FGFR4-210ENST00000508139 ABCA6Q8N139 1617 aa28.71■■■□□ 2.19
FGFR4-210ENST00000508139 C3P01024 1663 aa28.7■■■□□ 2.19
FGFR4-210ENST00000508139 UBTFP17480 764 aaKnown RBP28.67■■■□□ 2.18
FGFR4-210ENST00000508139 TROQ12816 1431 aaPredicted RBP28.67■■■□□ 2.18
FGFR4-210ENST00000508139 MYT1LQ9UL68 1186 aa28.65■■■□□ 2.18
FGFR4-210ENST00000508139 CDK11AQ9UQ88 783 aaPredicted RBP28.65■■■□□ 2.18
FGFR4-210ENST00000508139 PREX2Q70Z35 1606 aa28.65■■■□□ 2.18
FGFR4-210ENST00000508139 ITSN2Q9NZM3 1697 aa28.64■■■□□ 2.18
FGFR4-210ENST00000508139 UHRF1BP1Q6BDS2 1440 aa28.64■■■□□ 2.18
FGFR4-210ENST00000508139 REREQ9P2R6 1566 aa28.63■■■□□ 2.17
FGFR4-210ENST00000508139 CLIP1P30622 1438 aa28.63■■■□□ 2.17
FGFR4-210ENST00000508139 AFAP1Q8N556 730 aa28.63■■■□□ 2.17
FGFR4-210ENST00000508139 ABCC1P33527 1531 aa28.59■■■□□ 2.17
FGFR4-210ENST00000508139 CDC42BPAQ5VT25 1732 aa28.57■■■□□ 2.16
FGFR4-210ENST00000508139 KIDINS220Q9ULH0 1771 aa28.55■■■□□ 2.16
FGFR4-210ENST00000508139 MLH3Q9UHC1 1453 aa28.53■■■□□ 2.16
FGFR4-210ENST00000508139 DMRT2Q9Y5R5 561 aa28.53■■■□□ 2.16
FGFR4-210ENST00000508139 CHIC1Q5VXU3 224 aa28.52■■■□□ 2.16
FGFR4-210ENST00000508139 TRAPPC8Q9Y2L5 1435 aa28.51■■■□□ 2.15
FGFR4-210ENST00000508139 DISP3Q9P2K9 1392 aa28.5■■■□□ 2.15
FGFR4-210ENST00000508139 AGLP35573 1532 aa28.5■■■□□ 2.15
FGFR4-210ENST00000508139 ESF1Q9H501 851 aaKnown RBP28.45■■■□□ 2.14
FGFR4-210ENST00000508139 SUPT6HQ7KZ85 1726 aaKnown RBP28.45■■■□□ 2.14
FGFR4-210ENST00000508139 CCDC18Q5T9S5 1454 aa28.45■■■□□ 2.14
FGFR4-210ENST00000508139 SPATA31D1Q6ZQQ2 1576 aa28.45■■■□□ 2.14
FGFR4-210ENST00000508139 PTPRTO14522 1441 aa28.44■■■□□ 2.14
FGFR4-210ENST00000508139 MROH2AA6NES4 1674 aa28.44■■■□□ 2.14
FGFR4-210ENST00000508139 ILDR2Q71H61 639 aa28.42■■■□□ 2.14
FGFR4-210ENST00000508139 LTBP4Q8N2S1 1624 aa28.41■■■□□ 2.14
FGFR4-210ENST00000508139 SAMD9LQ8IVG5 1584 aa28.4■■■□□ 2.14
FGFR4-210ENST00000508139 CASKIN1Q8WXD9 1431 aa28.39■■■□□ 2.14
FGFR4-210ENST00000508139 NCOA1Q15788 1441 aa28.37■■■□□ 2.13
FGFR4-210ENST00000508139 CNTLNQ9NXG0 1405 aa28.37■■■□□ 2.13
FGFR4-210ENST00000508139 CLTCQ00610 1675 aaKnown RBP28.37■■■□□ 2.13
FGFR4-210ENST00000508139 SYCP2Q9BX26 1530 aa28.37■■■□□ 2.13
FGFR4-210ENST00000508139 CAMSAP1Q5T5Y3 1602 aa28.36■■■□□ 2.13
FGFR4-210ENST00000508139 MYO3AQ8NEV4 1616 aa28.31■■■□□ 2.12
FGFR4-210ENST00000508139 ZNF142P52746 1687 aaPredicted RBP28.31■■■□□ 2.12
FGFR4-210ENST00000508139 FYCO1Q9BQS8 1478 aa28.3■■■□□ 2.12
FGFR4-210ENST00000508139 ZNF777Q9ULD5 760 aaPredicted RBP28.3■■■□□ 2.12
FGFR4-210ENST00000508139 IQSEC2Q5JU85 1478 aa28.29■■■□□ 2.12
FGFR4-210ENST00000508139 INO80Q9ULG1 1556 aaPredicted RBP28.28■■■□□ 2.12
FGFR4-210ENST00000508139 ATP7AQ04656 1500 aa28.28■■■□□ 2.12
FGFR4-210ENST00000508139 NPATQ14207 1427 aa28.27■■■□□ 2.12
FGFR4-210ENST00000508139 SOCS7O14512 581 aa28.27■■■□□ 2.12
FGFR4-210ENST00000508139 PLXNC1O60486 1568 aa28.24■■■□□ 2.11
FGFR4-210ENST00000508139 GPATCH8Q9UKJ3 1502 aaKnown RBP28.23■■■□□ 2.11
FGFR4-210ENST00000508139 SPAG9O60271 1321 aaKnown RBP28.22■■■□□ 2.11
FGFR4-210ENST00000508139 ZMYM3Q14202 1370 aa28.22■■■□□ 2.11
FGFR4-210ENST00000508139 CEP170BQ9Y4F5 1589 aaPredicted RBP28.21■■■□□ 2.11
FGFR4-210ENST00000508139 ADGBQ8N7X0 1667 aa28.2■■■□□ 2.11
FGFR4-210ENST00000508139 HNRNPMP52272 730 aaKnown RBP eCLIP28.2■■■□□ 2.1
FGFR4-210ENST00000508139 NCKAP5LQ9HCH0 1330 aa28.18■■■□□ 2.1
FGFR4-210ENST00000508139 A2MP01023 1474 aa28.17■■■□□ 2.1
FGFR4-210ENST00000508139 ZNF335Q9H4Z2 1342 aaPredicted RBP28.16■■■□□ 2.1
FGFR4-210ENST00000508139 PLEKHH2Q8IVE3 1493 aa28.14■■■□□ 2.09
FGFR4-210ENST00000508139 PLA2R1Q13018 1463 aa28.12■■■□□ 2.09
FGFR4-210ENST00000508139 PTPRKQ15262 1439 aa28.11■■■□□ 2.09
FGFR4-210ENST00000508139 POLR1AO95602 1720 aaPredicted RBP28.11■■■□□ 2.09
FGFR4-210ENST00000508139 KIAA1107Q9UPP5 1409 aa28.1■■■□□ 2.09
FGFR4-210ENST00000508139 CCNB3Q8WWL7 1395 aa28.1■■■□□ 2.09
FGFR4-210ENST00000508139 CFDP1Q9UEE9 299 aaPredicted RBP28.09■■■□□ 2.09
FGFR4-210ENST00000508139 TCOF1Q13428 1488 aaKnown RBP28.08■■■□□ 2.09
FGFR4-210ENST00000508139 GGT6Q6P531 493 aa28.08■■■□□ 2.09
FGFR4-210ENST00000508139 TIAM1Q13009 1591 aa28.07■■■□□ 2.08
FGFR4-210ENST00000508139 UBAP1LF5GYI3 381 aa28.07■■■□□ 2.08
FGFR4-210ENST00000508139 DNMT1P26358 1616 aaKnown RBP28.05■■■□□ 2.08
FGFR4-210ENST00000508139 PKD2Q13563 968 aa28.03■■■□□ 2.08
FGFR4-210ENST00000508139 MTUS2Q5JR59 1369 aa28.02■■■□□ 2.08
FGFR4-210ENST00000508139 A2ML1A8K2U0 1454 aa28■■■□□ 2.07
FGFR4-210ENST00000508139 EHBP1L1Q8N3D4 1523 aa27.97■■■□□ 2.07
FGFR4-210ENST00000508139 PPP6R1Q9UPN7 881 aa27.97■■■□□ 2.07
FGFR4-210ENST00000508139 ZNF644Q9H582 1327 aaPredicted RBP27.96■■■□□ 2.07
FGFR4-210ENST00000508139 NEURL4Q96JN8 1562 aa27.96■■■□□ 2.07
FGFR4-210ENST00000508139 MBD5Q9P267 1494 aa27.94■■■□□ 2.06
FGFR4-210ENST00000508139 KDM5DQ9BY66 1539 aa27.9■■■□□ 2.06
FGFR4-210ENST00000508139 SCAF1Q9H7N4 1312 aaKnown RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms