RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 P3H3Q8IVL6 736 aa15.67■□□□□ 0.1
CAST-220ENST00000508117 CERKQ8TCT0 537 aa15.67■□□□□ 0.1
CAST-220ENST00000508117 NUP153P49790 1475 aaKnown RBP15.66■□□□□ 0.1
CAST-220ENST00000508117 AKNAQ7Z591 1439 aa15.66■□□□□ 0.1
CAST-220ENST00000508117 HSPA2P54652 639 aa15.65■□□□□ 0.1
CAST-220ENST00000508117 MAGI2Q86UL8 1455 aa15.65■□□□□ 0.1
CAST-220ENST00000508117 EFCAB5A4FU69 1503 aa15.63■□□□□ 0.09
CAST-220ENST00000508117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.63■□□□□ 0.09
CAST-220ENST00000508117 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
CAST-220ENST00000508117 TTC37Q6PGP7 1564 aa15.62■□□□□ 0.09
CAST-220ENST00000508117 ZFYVE16Q7Z3T8 1539 aa15.62■□□□□ 0.09
CAST-220ENST00000508117 PLEKHD1A6NEE1 506 aa15.61■□□□□ 0.09
CAST-220ENST00000508117 SIGLEC1Q9BZZ2 1709 aa15.6■□□□□ 0.09
CAST-220ENST00000508117 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.6■□□□□ 0.09
CAST-220ENST00000508117 FER1L4A9Z1Z3 1794 aa15.59■□□□□ 0.09
CAST-220ENST00000508117 YEATS2Q9ULM3 1422 aa15.58■□□□□ 0.08
CAST-220ENST00000508117 HECW1Q76N89 1606 aa15.56■□□□□ 0.08
CAST-220ENST00000508117 PREX1Q8TCU6 1659 aa15.56■□□□□ 0.08
CAST-220ENST00000508117 ARHGEF12Q9NZN5 1544 aa15.55■□□□□ 0.08
CAST-220ENST00000508117 CSRNP3Q8WYN3 585 aa15.55■□□□□ 0.08
CAST-220ENST00000508117 SOCS7O14512 581 aa15.54■□□□□ 0.08
CAST-220ENST00000508117 SETD1BQ9UPS6 1966 aaKnown RBP15.53■□□□□ 0.08
CAST-220ENST00000508117 ATP10AO60312 1499 aa15.52■□□□□ 0.08
CAST-220ENST00000508117 PLCH2O75038 1416 aa15.51■□□□□ 0.07
CAST-220ENST00000508117 C9orf84Q5VXU9 1444 aa15.51■□□□□ 0.07
CAST-220ENST00000508117 DISP3Q9P2K9 1392 aa15.51■□□□□ 0.07
CAST-220ENST00000508117 KCNA4P22459 653 aa15.51■□□□□ 0.07
CAST-220ENST00000508117 STRCQ7RTU9 1775 aa15.51■□□□□ 0.07
CAST-220ENST00000508117 SCAPERQ9BY12 1400 aa15.51■□□□□ 0.07
CAST-220ENST00000508117 C1QBPQ07021 282 aaKnown RBP15.5■□□□□ 0.07
CAST-220ENST00000508117 MLECQ14165 292 aa15.5■□□□□ 0.07
CAST-220ENST00000508117 ILDR2Q71H61 639 aa15.5■□□□□ 0.07
CAST-220ENST00000508117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.49■□□□□ 0.074e-8■□□□□ 8.4
CAST-220ENST00000508117 EEA1Q15075 1411 aa15.47■□□□□ 0.07
CAST-220ENST00000508117 PTPRTO14522 1441 aa15.45■□□□□ 0.06
CAST-220ENST00000508117 UHRF1BP1Q6BDS2 1440 aa15.45■□□□□ 0.06
CAST-220ENST00000508117 MYO5CQ9NQX4 1742 aa15.44■□□□□ 0.06
CAST-220ENST00000508117 EFCAB2Q5VUJ9 269 aa15.44■□□□□ 0.06
CAST-220ENST00000508117 CEBPAP49715 358 aaPredicted RBP15.43■□□□□ 0.06
CAST-220ENST00000508117 IQSEC2Q5JU85 1478 aa15.43■□□□□ 0.06
CAST-220ENST00000508117 ZNF518AQ6AHZ1 1483 aa15.43■□□□□ 0.06
CAST-220ENST00000508117 SPATA31D1Q6ZQQ2 1576 aa15.43■□□□□ 0.06
CAST-220ENST00000508117 REREQ9P2R6 1566 aa15.43■□□□□ 0.06
CAST-220ENST00000508117 CDK13Q14004 1512 aaKnown RBP15.43■□□□□ 0.06
CAST-220ENST00000508117 KDM5CP41229 1560 aa15.42■□□□□ 0.06
CAST-220ENST00000508117 RANGAP1P46060 587 aaPredicted RBP15.4■□□□□ 0.06
CAST-220ENST00000508117 LTBP4Q8N2S1 1624 aa15.39■□□□□ 0.05
CAST-220ENST00000508117 DIP2CQ9Y2E4 1556 aa15.37■□□□□ 0.05
CAST-220ENST00000508117 CDK11AQ9UQ88 783 aaPredicted RBP15.37■□□□□ 0.05
CAST-220ENST00000508117 C3P01024 1663 aa15.37■□□□□ 0.05
CAST-220ENST00000508117 AGLP35573 1532 aa15.37■□□□□ 0.05
CAST-220ENST00000508117 MLH3Q9UHC1 1453 aa15.36■□□□□ 0.05
CAST-220ENST00000508117 FMN1Q68DA7 1419 aa15.35■□□□□ 0.05
CAST-220ENST00000508117 TRAPPC8Q9Y2L5 1435 aa15.35■□□□□ 0.05
CAST-220ENST00000508117 AFAP1Q8N556 730 aa15.35■□□□□ 0.05
CAST-220ENST00000508117 KIF14Q15058 1648 aa15.35■□□□□ 0.05
CAST-220ENST00000508117 NCOA1Q15788 1441 aa15.34■□□□□ 0.05
CAST-220ENST00000508117 ARHGAP5Q13017 1502 aa15.33■□□□□ 0.05
CAST-220ENST00000508117 TROQ12816 1431 aaPredicted RBP15.33■□□□□ 0.04
CAST-220ENST00000508117 ABCA6Q8N139 1617 aa15.32■□□□□ 0.04
CAST-220ENST00000508117 CNTLNQ9NXG0 1405 aa15.32■□□□□ 0.04
CAST-220ENST00000508117 CLIP1P30622 1438 aa15.3■□□□□ 0.04
CAST-220ENST00000508117 CDC42BPBQ9Y5S2 1711 aa15.29■□□□□ 0.04
CAST-220ENST00000508117 ESF1Q9H501 851 aaKnown RBP15.29■□□□□ 0.04
CAST-220ENST00000508117 NPATQ14207 1427 aa15.28■□□□□ 0.04
CAST-220ENST00000508117 MYT1LQ9UL68 1186 aa15.27■□□□□ 0.04
CAST-220ENST00000508117 MROH2AA6NES4 1674 aa15.27■□□□□ 0.03
CAST-220ENST00000508117 ABCC1P33527 1531 aa15.27■□□□□ 0.03
CAST-220ENST00000508117 PREX2Q70Z35 1606 aa15.25■□□□□ 0.03
CAST-220ENST00000508117 KIDINS220Q9ULH0 1771 aa15.25■□□□□ 0.03
CAST-220ENST00000508117 ARHGAP35Q9NRY4 1499 aa15.25■□□□□ 0.03
CAST-220ENST00000508117 ITSN2Q9NZM3 1697 aa15.25■□□□□ 0.03
CAST-220ENST00000508117 CAMSAP1Q5T5Y3 1602 aa15.25■□□□□ 0.03
CAST-220ENST00000508117 ATP1B4Q9UN42 357 aaPredicted RBP15.24■□□□□ 0.03
CAST-220ENST00000508117 PLA2R1Q13018 1463 aa15.22■□□□□ 0.03
CAST-220ENST00000508117 LRRIQ1Q96JM4 1722 aa15.22■□□□□ 0.03
CAST-220ENST00000508117 ZNF142P52746 1687 aaPredicted RBP15.2■□□□□ 0.02
CAST-220ENST00000508117 PKD2Q13563 968 aa15.2■□□□□ 0.02
CAST-220ENST00000508117 ZMYM3Q14202 1370 aa15.2■□□□□ 0.02
CAST-220ENST00000508117 UBAP1LF5GYI3 381 aa15.18■□□□□ 0.02
CAST-220ENST00000508117 TCOF1Q13428 1488 aaKnown RBP15.18■□□□□ 0.02
CAST-220ENST00000508117 ZNF335Q9H4Z2 1342 aaPredicted RBP15.17■□□□□ 0.02
CAST-220ENST00000508117 SAMD9LQ8IVG5 1584 aa15.17■□□□□ 0.02
CAST-220ENST00000508117 CCDC18Q5T9S5 1454 aa15.17■□□□□ 0.02
CAST-220ENST00000508117 UBTFP17480 764 aaKnown RBP15.17■□□□□ 0.02
CAST-220ENST00000508117 CDC42BPAQ5VT25 1732 aa15.17■□□□□ 0.02
CAST-220ENST00000508117 MYO3AQ8NEV4 1616 aa15.16■□□□□ 0.02
CAST-220ENST00000508117 NCKAP5LQ9HCH0 1330 aa15.16■□□□□ 0.02
CAST-220ENST00000508117 CEP170BQ9Y4F5 1589 aaPredicted RBP15.15■□□□□ 0.02
CAST-220ENST00000508117 PLXNC1O60486 1568 aa15.14■□□□□ 0.01
CAST-220ENST00000508117 SUPT6HQ7KZ85 1726 aaKnown RBP15.14■□□□□ 0.01
CAST-220ENST00000508117 PTPRKQ15262 1439 aa15.13■□□□□ 0.01
CAST-220ENST00000508117 CASKIN1Q8WXD9 1431 aa15.13■□□□□ 0.01
CAST-220ENST00000508117 CLTCQ00610 1675 aaKnown RBP15.12■□□□□ 0.01
CAST-220ENST00000508117 KIAA1107Q9UPP5 1409 aa15.11■□□□□ 0.01
CAST-220ENST00000508117 SPAG9O60271 1321 aaKnown RBP15.11■□□□□ 0.01
CAST-220ENST00000508117 U3KPZ7 1027 aaPredicted RBP15.1■□□□□ 0.01
CAST-220ENST00000508117 ATP7AQ04656 1500 aa15.1■□□□□ 0.01
CAST-220ENST00000508117 SYCP2Q9BX26 1530 aa15.1■□□□□ 0.01
CAST-220ENST00000508117 INO80Q9ULG1 1556 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms