RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 RICTORQ6R327 1708 aa35.24■■■■□ 3.23
SNCB-204ENST00000508006 PLPPR3Q6T4P5 718 aa35.24■■■■□ 3.23
SNCB-204ENST00000508006 MAP3K1Q13233 1512 aa35.23■■■■□ 3.23
SNCB-204ENST00000508006 ARHGEF40Q8TER5 1519 aa35.23■■■■□ 3.23
SNCB-204ENST00000508006 POGZQ7Z3K3 1410 aa35.21■■■■□ 3.23
SNCB-204ENST00000508006 TTC37Q6PGP7 1564 aa35.19■■■■□ 3.22
SNCB-204ENST00000508006 RIMS1Q86UR5 1692 aaKnown RBP35.18■■■■□ 3.22
SNCB-204ENST00000508006 TIAM1Q13009 1591 aa35.18■■■■□ 3.22
SNCB-204ENST00000508006 TROQ12816 1431 aaPredicted RBP35.16■■■■□ 3.22
SNCB-204ENST00000508006 MLECQ14165 292 aa35.14■■■■□ 3.22
SNCB-204ENST00000508006 ZFYVE16Q7Z3T8 1539 aa35.12■■■■□ 3.21
SNCB-204ENST00000508006 LMTK3Q96Q04 1460 aa35.11■■■■□ 3.21
SNCB-204ENST00000508006 SCAPERQ9BY12 1400 aa35.11■■■■□ 3.21
SNCB-204ENST00000508006 YEATS2Q9ULM3 1422 aa35.11■■■■□ 3.21
SNCB-204ENST00000508006 PLCH2O75038 1416 aa35.1■■■■□ 3.21
SNCB-204ENST00000508006 ZMYM4Q5VZL5 1548 aa35.1■■■■□ 3.21
SNCB-204ENST00000508006 KIF14Q15058 1648 aa35.1■■■■□ 3.21
SNCB-204ENST00000508006 MAGI2Q86UL8 1455 aa35.09■■■■□ 3.21
SNCB-204ENST00000508006 APLP2Q06481 763 aa35.09■■■■□ 3.21
SNCB-204ENST00000508006 EFCAB2Q5VUJ9 269 aa35.07■■■■□ 3.2
SNCB-204ENST00000508006 EHBP1L1Q8N3D4 1523 aa35.06■■■■□ 3.2
SNCB-204ENST00000508006 HSPA2P54652 639 aa35.06■■■■□ 3.2
SNCB-204ENST00000508006 MTUS2Q5JR59 1369 aa35.05■■■■□ 3.2
SNCB-204ENST00000508006 LRRC9Q6ZRR7 1453 aa35■■■■□ 3.19
SNCB-204ENST00000508006 MYT1LQ9UL68 1186 aa34.97■■■■□ 3.19
SNCB-204ENST00000508006 SIGLEC1Q9BZZ2 1709 aa34.96■■■■□ 3.19
SNCB-204ENST00000508006 MYO5CQ9NQX4 1742 aa34.95■■■■□ 3.19
SNCB-204ENST00000508006 ATP10AO60312 1499 aa34.94■■■■□ 3.18
SNCB-204ENST00000508006 SUPT6HQ7KZ85 1726 aaKnown RBP34.94■■■■□ 3.18
SNCB-204ENST00000508006 FER1L4A9Z1Z3 1794 aa34.92■■■■□ 3.18
SNCB-204ENST00000508006 C9orf84Q5VXU9 1444 aa34.89■■■■□ 3.18
SNCB-204ENST00000508006 AFAP1Q8N556 730 aa34.86■■■■□ 3.17
SNCB-204ENST00000508006 ARHGAP5Q13017 1502 aa34.86■■■■□ 3.17
SNCB-204ENST00000508006 KANK4Q5T7N3 995 aaPredicted RBP34.85■■■■□ 3.17
SNCB-204ENST00000508006 ZNF518AQ6AHZ1 1483 aa34.83■■■■□ 3.17
SNCB-204ENST00000508006 CDC42BPAQ5VT25 1732 aa34.82■■■■□ 3.16
SNCB-204ENST00000508006 CEBPAP49715 358 aaPredicted RBP34.82■■■■□ 3.16
SNCB-204ENST00000508006 PREX2Q70Z35 1606 aa34.81■■■■□ 3.16
SNCB-204ENST00000508006 NCOA2Q15596 1464 aa34.8■■■■□ 3.16
SNCB-204ENST00000508006 ARHGEF12Q9NZN5 1544 aa34.79■■■■□ 3.16
SNCB-204ENST00000508006 ITSN2Q9NZM3 1697 aa34.79■■■■□ 3.16
SNCB-204ENST00000508006 CERKQ8TCT0 537 aa34.77■■■■□ 3.16
SNCB-204ENST00000508006 CDC42BPBQ9Y5S2 1711 aa34.77■■■■□ 3.16
SNCB-204ENST00000508006 CCNB3Q8WWL7 1395 aa34.75■■■■□ 3.15
SNCB-204ENST00000508006 GPATCH8Q9UKJ3 1502 aaKnown RBP34.73■■■■□ 3.15
SNCB-204ENST00000508006 ESF1Q9H501 851 aaKnown RBP34.71■■■■□ 3.15
SNCB-204ENST00000508006 KDM5CP41229 1560 aa34.69■■■■□ 3.14
SNCB-204ENST00000508006 PREX1Q8TCU6 1659 aa34.69■■■■□ 3.14
SNCB-204ENST00000508006 DMRT2Q9Y5R5 561 aa34.67■■■■□ 3.14
SNCB-204ENST00000508006 SETD1BQ9UPS6 1966 aaKnown RBP34.63■■■■□ 3.13
SNCB-204ENST00000508006 UHRF1BP1Q6BDS2 1440 aa34.62■■■■□ 3.13
SNCB-204ENST00000508006 DIP2CQ9Y2E4 1556 aa34.62■■■■□ 3.13
SNCB-204ENST00000508006 MLH3Q9UHC1 1453 aa34.61■■■■□ 3.13
SNCB-204ENST00000508006 CFDP1Q9UEE9 299 aaPredicted RBP34.6■■■■□ 3.13
SNCB-204ENST00000508006 MYOM3Q5VTT5 1437 aa34.6■■■■□ 3.13
SNCB-204ENST00000508006 TRAPPC8Q9Y2L5 1435 aa34.58■■■■□ 3.13
SNCB-204ENST00000508006 MIA2Q96PC5 1412 aa34.57■■■■□ 3.13
SNCB-204ENST00000508006 ZNF777Q9ULD5 760 aaPredicted RBP34.56■■■■□ 3.12
SNCB-204ENST00000508006 REREQ9P2R6 1566 aa34.55■■■■□ 3.12
SNCB-204ENST00000508006 ABCA6Q8N139 1617 aa34.55■■■■□ 3.12
SNCB-204ENST00000508006 SAMD9LQ8IVG5 1584 aa34.53■■■■□ 3.12
SNCB-204ENST00000508006 PLEKHH2Q8IVE3 1493 aa34.53■■■■□ 3.12
SNCB-204ENST00000508006 ABCC1P33527 1531 aa34.52■■■■□ 3.12
SNCB-204ENST00000508006 AGLP35573 1532 aa34.48■■■■□ 3.11
SNCB-204ENST00000508006 STRCQ7RTU9 1775 aa34.48■■■■□ 3.11
SNCB-204ENST00000508006 KIAA1107Q9UPP5 1409 aa34.47■■■■□ 3.11
SNCB-204ENST00000508006 C3P01024 1663 aa34.47■■■■□ 3.11
SNCB-204ENST00000508006 FGD6Q6ZV73 1430 aa34.44■■■■□ 3.1
SNCB-204ENST00000508006 KIDINS220Q9ULH0 1771 aa34.43■■■■□ 3.1
SNCB-204ENST00000508006 CAMSAP2Q08AD1 1489 aa34.42■■■■□ 3.1
SNCB-204ENST00000508006 PTPN23Q9H3S7 1636 aa34.41■■■■□ 3.1
SNCB-204ENST00000508006 HNRNPMP52272 730 aaKnown RBP eCLIP34.41■■■■□ 3.1
SNCB-204ENST00000508006 PPARGC1BQ86YN6 1023 aaKnown RBP34.41■■■■□ 3.1
SNCB-204ENST00000508006 CNTLNQ9NXG0 1405 aa34.4■■■■□ 3.1
SNCB-204ENST00000508006 SPAG9O60271 1321 aaKnown RBP34.4■■■■□ 3.1
SNCB-204ENST00000508006 SYCP2Q9BX26 1530 aa34.39■■■■□ 3.1
SNCB-204ENST00000508006 TCOF1Q13428 1488 aaKnown RBP34.37■■■■□ 3.09
SNCB-204ENST00000508006 PTPRTO14522 1441 aa34.35■■■■□ 3.09
SNCB-204ENST00000508006 ZNF644Q9H582 1327 aaPredicted RBP34.34■■■■□ 3.09
SNCB-204ENST00000508006 ARHGEF5Q12774 1597 aa34.34■■■■□ 3.09
SNCB-204ENST00000508006 RSPH4AQ5TD94 716 aa34.34■■■■□ 3.09
SNCB-204ENST00000508006 MBD5Q9P267 1494 aa34.33■■■■□ 3.09
SNCB-204ENST00000508006 ZMYM3Q14202 1370 aa34.29■■■■□ 3.08
SNCB-204ENST00000508006 CCDC141Q6ZP82 1450 aa34.26■■■■□ 3.07
SNCB-204ENST00000508006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.25■■■■□ 3.07
SNCB-204ENST00000508006 RRBP1Q9P2E9 1410 aaKnown RBP34.23■■■■□ 3.07
SNCB-204ENST00000508006 GGT6Q6P531 493 aa34.23■■■■□ 3.07
SNCB-204ENST00000508006 NPATQ14207 1427 aa34.22■■■■□ 3.07
SNCB-204ENST00000508006 DISP3Q9P2K9 1392 aa34.22■■■■□ 3.07
SNCB-204ENST00000508006 MROH2AA6NES4 1674 aa34.22■■■■□ 3.07
SNCB-204ENST00000508006 NCOA1Q15788 1441 aa34.21■■■■□ 3.07
SNCB-204ENST00000508006 ATP7AQ04656 1500 aa34.21■■■■□ 3.07
SNCB-204ENST00000508006 DNMT1P26358 1616 aaKnown RBP34.21■■■■□ 3.07
SNCB-204ENST00000508006 A2MP01023 1474 aa34.18■■■■□ 3.06
SNCB-204ENST00000508006 CROCC2H7BZ55 1655 aa34.18■■■■□ 3.06
SNCB-204ENST00000508006 CAMSAP1Q5T5Y3 1602 aa34.17■■■■□ 3.06
SNCB-204ENST00000508006 INO80Q9ULG1 1556 aaPredicted RBP34.17■■■■□ 3.06
SNCB-204ENST00000508006 RTEL1-TNFRSF6BF6WH68 1400 aa34.16■■■■□ 3.06
SNCB-204ENST00000508006 MAST1Q9Y2H9 1570 aa34.15■■■■□ 3.06
SNCB-204ENST00000508006 NCKAP5LQ9HCH0 1330 aa34.14■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms