RNA–Protein interactions for RNA: ENST00000507691.6

SMG7-213, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG7, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-213ENST00000507691 EFCAB2Q5VUJ9 269 aa28.41■■■□□ 2.14
SMG7-213ENST00000507691 CDK11AQ9UQ88 783 aaPredicted RBP28.41■■■□□ 2.14
SMG7-213ENST00000507691 ATP10AO60312 1499 aa28.4■■■□□ 2.14
SMG7-213ENST00000507691 FER1L4A9Z1Z3 1794 aa28.39■■■□□ 2.14
SMG7-213ENST00000507691 HSPA2P54652 639 aa28.39■■■□□ 2.14
SMG7-213ENST00000507691 MYO5CQ9NQX4 1742 aa28.39■■■□□ 2.14
SMG7-213ENST00000507691 ARHGAP35Q9NRY4 1499 aa28.39■■■□□ 2.13
SMG7-213ENST00000507691 C9orf84Q5VXU9 1444 aa28.37■■■□□ 2.13
SMG7-213ENST00000507691 ATP1B4Q9UN42 357 aaPredicted RBP28.37■■■□□ 2.13
SMG7-213ENST00000507691 ARHGEF12Q9NZN5 1544 aa28.37■■■□□ 2.13
SMG7-213ENST00000507691 MLECQ14165 292 aa28.36■■■□□ 2.13
SMG7-213ENST00000507691 PLPPR3Q6T4P5 718 aa28.34■■■□□ 2.13
SMG7-213ENST00000507691 KIF14Q15058 1648 aa28.33■■■□□ 2.13
SMG7-213ENST00000507691 TROQ12816 1431 aaPredicted RBP28.33■■■□□ 2.13
SMG7-213ENST00000507691 ZNF518AQ6AHZ1 1483 aa28.33■■■□□ 2.13
SMG7-213ENST00000507691 KDM5CP41229 1560 aa28.29■■■□□ 2.12
SMG7-213ENST00000507691 CLIP1P30622 1438 aa28.28■■■□□ 2.12
SMG7-213ENST00000507691 EHMT2Q96KQ7 1210 aa28.28■■■□□ 2.12
SMG7-213ENST00000507691 ARHGAP5Q13017 1502 aa28.27■■■□□ 2.12
SMG7-213ENST00000507691 PREX1Q8TCU6 1659 aa28.24■■■□□ 2.11
SMG7-213ENST00000507691 AFAP1Q8N556 730 aa28.22■■■□□ 2.11
SMG7-213ENST00000507691 REREQ9P2R6 1566 aa28.21■■■□□ 2.11
SMG7-213ENST00000507691 CHIC1Q5VXU3 224 aa28.21■■■□□ 2.11
SMG7-213ENST00000507691 CERKQ8TCT0 537 aa28.21■■■□□ 2.11
SMG7-213ENST00000507691 LRRIQ1Q96JM4 1722 aa28.2■■■□□ 2.1
SMG7-213ENST00000507691 MLH3Q9UHC1 1453 aa28.18■■■□□ 2.1
SMG7-213ENST00000507691 DIP2CQ9Y2E4 1556 aa28.18■■■□□ 2.1
SMG7-213ENST00000507691 CDC42BPBQ9Y5S2 1711 aa28.16■■■□□ 2.1
SMG7-213ENST00000507691 CEBPAP49715 358 aaPredicted RBP28.16■■■□□ 2.1
SMG7-213ENST00000507691 SETD1BQ9UPS6 1966 aaKnown RBP28.15■■■□□ 2.1
SMG7-213ENST00000507691 CCDC18Q5T9S5 1454 aa28.14■■■□□ 2.09
SMG7-213ENST00000507691 PREX2Q70Z35 1606 aa28.13■■■□□ 2.09
SMG7-213ENST00000507691 UHRF1BP1Q6BDS2 1440 aa28.12■■■□□ 2.09
SMG7-213ENST00000507691 CASKIN1Q8WXD9 1431 aa28.12■■■□□ 2.09
SMG7-213ENST00000507691 DMRT2Q9Y5R5 561 aa28.12■■■□□ 2.09
SMG7-213ENST00000507691 ABCC1P33527 1531 aa28.12■■■□□ 2.09
SMG7-213ENST00000507691 AGLP35573 1532 aa28.12■■■□□ 2.09
SMG7-213ENST00000507691 ABCA6Q8N139 1617 aa28.11■■■□□ 2.09
SMG7-213ENST00000507691 MYT1LQ9UL68 1186 aa28.11■■■□□ 2.09
SMG7-213ENST00000507691 TRAPPC8Q9Y2L5 1435 aa28.09■■■□□ 2.09
SMG7-213ENST00000507691 STRCQ7RTU9 1775 aa28.08■■■□□ 2.09
SMG7-213ENST00000507691 ITSN2Q9NZM3 1697 aa28.06■■■□□ 2.08
SMG7-213ENST00000507691 C3P01024 1663 aa28.03■■■□□ 2.08
SMG7-213ENST00000507691 KIDINS220Q9ULH0 1771 aa28.01■■■□□ 2.07
SMG7-213ENST00000507691 ESF1Q9H501 851 aaKnown RBP28■■■□□ 2.07
SMG7-213ENST00000507691 CDC42BPAQ5VT25 1732 aa28■■■□□ 2.07
SMG7-213ENST00000507691 CNTLNQ9NXG0 1405 aa28■■■□□ 2.07
SMG7-213ENST00000507691 FYCO1Q9BQS8 1478 aa27.99■■■□□ 2.07
SMG7-213ENST00000507691 PTPRTO14522 1441 aa27.99■■■□□ 2.07
SMG7-213ENST00000507691 SAMD9LQ8IVG5 1584 aa27.94■■■□□ 2.06
SMG7-213ENST00000507691 GPATCH8Q9UKJ3 1502 aaKnown RBP27.9■■■□□ 2.06
SMG7-213ENST00000507691 NPATQ14207 1427 aa27.89■■■□□ 2.06
SMG7-213ENST00000507691 MROH2AA6NES4 1674 aa27.88■■■□□ 2.05
SMG7-213ENST00000507691 SYCP2Q9BX26 1530 aa27.87■■■□□ 2.05
SMG7-213ENST00000507691 NCOA1Q15788 1441 aa27.87■■■□□ 2.05
SMG7-213ENST00000507691 KIAA1107Q9UPP5 1409 aa27.86■■■□□ 2.05
SMG7-213ENST00000507691 ZNF777Q9ULD5 760 aaPredicted RBP27.86■■■□□ 2.05
SMG7-213ENST00000507691 SPAG9O60271 1321 aaKnown RBP27.86■■■□□ 2.05
SMG7-213ENST00000507691 PLEKHH2Q8IVE3 1493 aa27.84■■■□□ 2.05
SMG7-213ENST00000507691 ZMYM3Q14202 1370 aa27.82■■■□□ 2.04
SMG7-213ENST00000507691 ATP7AQ04656 1500 aa27.82■■■□□ 2.04
SMG7-213ENST00000507691 LTBP4Q8N2S1 1624 aa27.81■■■□□ 2.04
SMG7-213ENST00000507691 HNRNPMP52272 730 aaKnown RBP eCLIP27.81■■■□□ 2.042e-6■□□□□ 8.9
SMG7-213ENST00000507691 IQSEC2Q5JU85 1478 aa27.81■■■□□ 2.04
SMG7-213ENST00000507691 PLXNC1O60486 1568 aa27.8■■■□□ 2.04
SMG7-213ENST00000507691 INO80Q9ULG1 1556 aaPredicted RBP27.79■■■□□ 2.04
SMG7-213ENST00000507691 CFDP1Q9UEE9 299 aaPredicted RBP27.79■■■□□ 2.04
SMG7-213ENST00000507691 SUPT6HQ7KZ85 1726 aaKnown RBP27.78■■■□□ 2.04
SMG7-213ENST00000507691 CCNB3Q8WWL7 1395 aa27.77■■■□□ 2.04
SMG7-213ENST00000507691 CAMSAP1Q5T5Y3 1602 aa27.77■■■□□ 2.04
SMG7-213ENST00000507691 A2MP01023 1474 aa27.76■■■□□ 2.04
SMG7-213ENST00000507691 DISP3Q9P2K9 1392 aa27.73■■■□□ 2.03
SMG7-213ENST00000507691 MTUS2Q5JR59 1369 aa27.73■■■□□ 2.03
SMG7-213ENST00000507691 PPP6R1Q9UPN7 881 aa27.71■■■□□ 2.03
SMG7-213ENST00000507691 ZNF142P52746 1687 aaPredicted RBP27.71■■■□□ 2.03
SMG7-213ENST00000507691 CLTCQ00610 1675 aaKnown RBP27.71■■■□□ 2.03
SMG7-213ENST00000507691 PLA2R1Q13018 1463 aa27.7■■■□□ 2.02
SMG7-213ENST00000507691 PTPRKQ15262 1439 aa27.69■■■□□ 2.02
SMG7-213ENST00000507691 MYO3AQ8NEV4 1616 aa27.67■■■□□ 2.02
SMG7-213ENST00000507691 ADGBQ8N7X0 1667 aa27.67■■■□□ 2.02
SMG7-213ENST00000507691 PKD2Q13563 968 aa27.66■■■□□ 2.02
SMG7-213ENST00000507691 CEP170BQ9Y4F5 1589 aaPredicted RBP27.65■■■□□ 2.02
SMG7-213ENST00000507691 GGT6Q6P531 493 aa27.64■■■□□ 2.02
SMG7-213ENST00000507691 TIAM1Q13009 1591 aa27.64■■■□□ 2.01
SMG7-213ENST00000507691 NCKAP5LQ9HCH0 1330 aa27.64■■■□□ 2.01
SMG7-213ENST00000507691 TCOF1Q13428 1488 aaKnown RBP27.64■■■□□ 2.01
SMG7-213ENST00000507691 MBD5Q9P267 1494 aa27.64■■■□□ 2.01
SMG7-213ENST00000507691 ILDR2Q71H61 639 aa27.63■■■□□ 2.01
SMG7-213ENST00000507691 RTEL1-TNFRSF6BF6WH68 1400 aa27.63■■■□□ 2.01
SMG7-213ENST00000507691 EHBP1L1Q8N3D4 1523 aa27.62■■■□□ 2.01
SMG7-213ENST00000507691 SPATA31D1Q6ZQQ2 1576 aa27.6■■■□□ 2.01
SMG7-213ENST00000507691 CEP162Q5TB80 1403 aa27.59■■■□□ 2.01
SMG7-213ENST00000507691 ZNF644Q9H582 1327 aaPredicted RBP27.59■■■□□ 2.01
SMG7-213ENST00000507691 SOCS7O14512 581 aa27.58■■■□□ 2.01
SMG7-213ENST00000507691 ZNF335Q9H4Z2 1342 aaPredicted RBP27.58■■■□□ 2.01
SMG7-213ENST00000507691 DHX29Q7Z478 1369 aaKnown RBP27.56■■■□□ 2
SMG7-213ENST00000507691 A2ML1A8K2U0 1454 aa27.55■■■□□ 2
SMG7-213ENST00000507691 FAM135AQ9P2D6 1515 aa27.52■■■□□ 2
SMG7-213ENST00000507691 DNMT1P26358 1616 aaKnown RBP27.5■■□□□ 1.99
SMG7-213ENST00000507691 UBAP1LF5GYI3 381 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms