RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 RIOK3O14730 519 aaKnown RBP10.67□□□□□ -0.7
VEGFC-201ENST00000507638 IFNL1Q8IU54 200 aa10.67□□□□□ -0.7
VEGFC-201ENST00000507638 CERKQ8TCT0 537 aa10.67□□□□□ -0.7
VEGFC-201ENST00000507638 SPATA31D1Q6ZQQ2 1576 aa10.67□□□□□ -0.7
VEGFC-201ENST00000507638 ABCC8Q09428 1581 aa10.66□□□□□ -0.7
VEGFC-201ENST00000507638 PDAP1Q13442 181 aaKnown RBP10.66□□□□□ -0.7
VEGFC-201ENST00000507638 PLSCR2Q9NRY7 297 aa10.65□□□□□ -0.7
VEGFC-201ENST00000507638 VGFO15240 615 aaPredicted RBP10.64□□□□□ -0.71
VEGFC-201ENST00000507638 DIP2BQ9P265 1576 aa10.64□□□□□ -0.71
VEGFC-201ENST00000507638 RAD54L2Q9Y4B4 1467 aa10.63□□□□□ -0.71
VEGFC-201ENST00000507638 PRDM2Q13029 1718 aa10.63□□□□□ -0.71
VEGFC-201ENST00000507638 MAGI1Q96QZ7 1491 aaPredicted RBP10.62□□□□□ -0.71
VEGFC-201ENST00000507638 ASTLQ6HA08 431 aaPredicted RBP10.62□□□□□ -0.71
VEGFC-201ENST00000507638 DNMBPQ6XZF7 1577 aa10.6□□□□□ -0.71
VEGFC-201ENST00000507638 PCDHB8Q9UN66 801 aa10.6□□□□□ -0.71
VEGFC-201ENST00000507638 POLA1P09884 1462 aaPredicted RBP10.6□□□□□ -0.71
VEGFC-201ENST00000507638 SOGA1O94964 1423 aa10.59□□□□□ -0.71
VEGFC-201ENST00000507638 PSEN1P49768 467 aa10.59□□□□□ -0.71
VEGFC-201ENST00000507638 TMEM106CQ9BVX2 250 aa10.58□□□□□ -0.72
VEGFC-201ENST00000507638 CEP170Q5SW79 1584 aa10.57□□□□□ -0.72
VEGFC-201ENST00000507638 ATMINO43313 823 aaPredicted RBP10.57□□□□□ -0.72
VEGFC-201ENST00000507638 TTLL13PA6NNM8 815 aa10.56□□□□□ -0.72
VEGFC-201ENST00000507638 IER5LQ5T953 404 aa10.56□□□□□ -0.72
VEGFC-201ENST00000507638 BMP2KQ9NSY1 1161 aaPredicted RBP10.56□□□□□ -0.72
VEGFC-201ENST00000507638 GRIN2BQ13224 1484 aa10.55□□□□□ -0.72
VEGFC-201ENST00000507638 MAPKBP1O60336 1514 aa10.55□□□□□ -0.72
VEGFC-201ENST00000507638 GOLGA2Q08379 1002 aa10.55□□□□□ -0.72
VEGFC-201ENST00000507638 SLC39A7Q92504 469 aa10.55□□□□□ -0.72
VEGFC-201ENST00000507638 RNF25Q96BH1 459 aaPredicted RBP10.55□□□□□ -0.72
VEGFC-201ENST00000507638 LHX8Q68G74 356 aa10.54□□□□□ -0.72
VEGFC-201ENST00000507638 TOP2BQ02880 1626 aa10.54□□□□□ -0.72
VEGFC-201ENST00000507638 RGL2O15211 777 aa10.53□□□□□ -0.72
VEGFC-201ENST00000507638 C7P10643 843 aa10.53□□□□□ -0.72
VEGFC-201ENST00000507638 RTN4Q9NQC3 1192 aaKnown RBP10.53□□□□□ -0.72
VEGFC-201ENST00000507638 COL17A1Q9UMD9 1497 aaPredicted RBP10.52□□□□□ -0.73
VEGFC-201ENST00000507638 TRIM35Q9UPQ4 493 aa10.5□□□□□ -0.73
VEGFC-201ENST00000507638 ATN1P54259 1190 aaPredicted RBP10.49□□□□□ -0.73
VEGFC-201ENST00000507638 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.48□□□□□ -0.73
VEGFC-201ENST00000507638 POTEIP0CG38 1075 aa10.48□□□□□ -0.73
VEGFC-201ENST00000507638 MKRN3Q13064 507 aaKnown RBP10.48□□□□□ -0.73
VEGFC-201ENST00000507638 ZFP91Q96JP5 570 aaPredicted RBP10.48□□□□□ -0.73
VEGFC-201ENST00000507638 TRPC6Q9Y210 931 aa10.48□□□□□ -0.73
VEGFC-201ENST00000507638 WDR97A6NE52 1622 aa10.47□□□□□ -0.73
VEGFC-201ENST00000507638 SHROOM2Q13796 1616 aa10.45□□□□□ -0.74
VEGFC-201ENST00000507638 PRG4Q92954 1404 aaPredicted RBP10.45□□□□□ -0.74
VEGFC-201ENST00000507638 STK25O00506 426 aa10.45□□□□□ -0.74
VEGFC-201ENST00000507638 HS6ST3Q8IZP7 471 aa10.45□□□□□ -0.74
VEGFC-201ENST00000507638 PPRC1Q5VV67 1664 aaKnown RBP10.44□□□□□ -0.74
VEGFC-201ENST00000507638 HSPA2P54652 639 aa10.44□□□□□ -0.74
VEGFC-201ENST00000507638 SOX12O15370 315 aa10.43□□□□□ -0.74
VEGFC-201ENST00000507638 JPH4Q96JJ6 628 aa10.43□□□□□ -0.74
VEGFC-201ENST00000507638 BCL11BQ9C0K0 894 aaPredicted RBP10.43□□□□□ -0.74
VEGFC-201ENST00000507638 PBRM1Q86U86 1689 aa10.42□□□□□ -0.74
VEGFC-201ENST00000507638 SEC24BO95487 1268 aa10.42□□□□□ -0.74
VEGFC-201ENST00000507638 CABP2Q9NPB3 220 aa10.42□□□□□ -0.74
VEGFC-201ENST00000507638 RYDENQ9NUL5 291 aaKnown RBP10.42□□□□□ -0.74
VEGFC-201ENST00000507638 METRNQ9UJH8 293 aa10.42□□□□□ -0.74
VEGFC-201ENST00000507638 STK24Q9Y6E0 443 aa10.42□□□□□ -0.74
VEGFC-201ENST00000507638 ADCY10Q96PN6 1610 aa10.41□□□□□ -0.74
VEGFC-201ENST00000507638 GRIN2AQ12879 1464 aa10.41□□□□□ -0.74
VEGFC-201ENST00000507638 NUP160Q12769 1436 aa10.41□□□□□ -0.74
VEGFC-201ENST00000507638 PCF11O94913 1555 aaKnown RBP10.4□□□□□ -0.74
VEGFC-201ENST00000507638 PTPRMP28827 1452 aa10.4□□□□□ -0.74
VEGFC-201ENST00000507638 FGD5Q6ZNL6 1462 aa10.39□□□□□ -0.75
VEGFC-201ENST00000507638 PLCG2P16885 1265 aa10.39□□□□□ -0.75
VEGFC-201ENST00000507638 PELP1Q8IZL8 1130 aaKnown RBP10.39□□□□□ -0.75
VEGFC-201ENST00000507638 OCEL1Q9H607 264 aa10.39□□□□□ -0.75
VEGFC-201ENST00000507638 TOP2AP11388 1531 aaKnown RBP10.38□□□□□ -0.75
VEGFC-201ENST00000507638 CHGAP10645 457 aaKnown RBP10.38□□□□□ -0.75
VEGFC-201ENST00000507638 CCDC88BA6NC98 1476 aa10.36□□□□□ -0.75
VEGFC-201ENST00000507638 IRX5P78411 483 aaPredicted RBP10.36□□□□□ -0.75
VEGFC-201ENST00000507638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.35□□□□□ -0.75
VEGFC-201ENST00000507638 NLRP6P59044 892 aa10.34□□□□□ -0.75
VEGFC-201ENST00000507638 MAMSTRQ6ZN01 415 aa10.34□□□□□ -0.75
VEGFC-201ENST00000507638 EFCAB3Q8N7B9 438 aa10.33□□□□□ -0.76
VEGFC-201ENST00000507638 GLI2P10070 1586 aa10.32□□□□□ -0.76
VEGFC-201ENST00000507638 L3MBTL3Q96JM7 780 aaPredicted RBP10.32□□□□□ -0.76
VEGFC-201ENST00000507638 KIF21BO75037 1637 aa10.32□□□□□ -0.76
VEGFC-201ENST00000507638 ADAMTSL3P82987 1691 aa10.29□□□□□ -0.76
VEGFC-201ENST00000507638 ASXL2Q76L83 1435 aa10.28□□□□□ -0.76
VEGFC-201ENST00000507638 G3V3G9 751 aa10.28□□□□□ -0.76
VEGFC-201ENST00000507638 BBXQ8WY36 941 aaPredicted RBP10.28□□□□□ -0.76
VEGFC-201ENST00000507638 TEX14Q8IWB6 1497 aa10.28□□□□□ -0.76
VEGFC-201ENST00000507638 PLB1Q6P1J6 1458 aa10.26□□□□□ -0.77
VEGFC-201ENST00000507638 PDCD7Q8N8D1 485 aaKnown RBP10.26□□□□□ -0.77
VEGFC-201ENST00000507638 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.26□□□□□ -0.77
VEGFC-201ENST00000507638 TTBK1Q5TCY1 1321 aaPredicted RBP10.26□□□□□ -0.77
VEGFC-201ENST00000507638 COLQQ9Y215 455 aaPredicted RBP10.25□□□□□ -0.77
VEGFC-201ENST00000507638 SCUBE2Q9NQ36 999 aa10.24□□□□□ -0.77
VEGFC-201ENST00000507638 ABCA5Q8WWZ7 1642 aa10.23□□□□□ -0.77
VEGFC-201ENST00000507638 MAP3K4Q9Y6R4 1608 aa10.23□□□□□ -0.77
VEGFC-201ENST00000507638 MFRPQ9BY79 579 aa10.23□□□□□ -0.77
VEGFC-201ENST00000507638 ADAMTS12P58397 1594 aa10.22□□□□□ -0.77
VEGFC-201ENST00000507638 POTEFA5A3E0 1075 aa10.22□□□□□ -0.77
VEGFC-201ENST00000507638 FBXO22Q8NEZ5 403 aa10.22□□□□□ -0.77
VEGFC-201ENST00000507638 PHF8Q9UPP1 1060 aa10.22□□□□□ -0.77
VEGFC-201ENST00000507638 FHAD1B1AJZ9 1412 aa10.22□□□□□ -0.77
VEGFC-201ENST00000507638 CUX1P39880 1505 aa10.22□□□□□ -0.77
VEGFC-201ENST00000507638 EPRSP07814 1512 aaKnown RBP10.2□□□□□ -0.78
VEGFC-201ENST00000507638 ARID4BQ4LE39 1312 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms