RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 PHF14O94880 888 aa8.13□□□□□ -1.11
PDE4D-216ENST00000507116 CLCN1P35523 988 aa8.13□□□□□ -1.11
PDE4D-216ENST00000507116 PLCB2Q00722 1185 aa8.13□□□□□ -1.11
PDE4D-216ENST00000507116 PPP4R3BQ5MIZ7 849 aa8.13□□□□□ -1.11
PDE4D-216ENST00000507116 ZHX1Q9UKY1 873 aaPredicted RBP8.13□□□□□ -1.11
PDE4D-216ENST00000507116 FRAT1Q92837 279 aaPredicted RBP8.11□□□□□ -1.11
PDE4D-216ENST00000507116 TAF3Q5VWG9 929 aa8.11□□□□□ -1.11
PDE4D-216ENST00000507116 SETQ01105 290 aaPredicted RBP8.1□□□□□ -1.11
PDE4D-216ENST00000507116 DMTNQ08495 405 aa8.09□□□□□ -1.11
PDE4D-216ENST00000507116 DNTTIP2Q5QJE6 756 aaKnown RBP8.09□□□□□ -1.11
PDE4D-216ENST00000507116 KIF20AO95235 890 aa8.08□□□□□ -1.12
PDE4D-216ENST00000507116 SLC52A1Q9NWF4 448 aa8.08□□□□□ -1.12
PDE4D-216ENST00000507116 NPM1P06748 294 aaKnown RBP eCLIP8.08□□□□□ -1.12
PDE4D-216ENST00000507116 MYCNP04198 464 aaPredicted RBP8.07□□□□□ -1.12
PDE4D-216ENST00000507116 PSEN1P49768 467 aa8.07□□□□□ -1.12
PDE4D-216ENST00000507116 DCAF11Q8TEB1 546 aa8.07□□□□□ -1.12
PDE4D-216ENST00000507116 PPP4R2Q9NY27 417 aa8.07□□□□□ -1.12
PDE4D-216ENST00000507116 LAS1LQ9Y4W2 734 aaKnown RBP8.07□□□□□ -1.12
PDE4D-216ENST00000507116 MAPK8IP2Q13387 824 aaPredicted RBP8.07□□□□□ -1.12
PDE4D-216ENST00000507116 CC2D1BQ5T0F9 858 aaKnown RBP8.05□□□□□ -1.12
PDE4D-216ENST00000507116 TRIM44Q96DX7 344 aaPredicted RBP8.05□□□□□ -1.12
PDE4D-216ENST00000507116 OS9Q13438 667 aaPredicted RBP8.05□□□□□ -1.12
PDE4D-216ENST00000507116 MTERF4Q7Z6M4 381 aaKnown RBP8.04□□□□□ -1.12
PDE4D-216ENST00000507116 DNAJC5BQ9UF47 199 aa8.04□□□□□ -1.12
PDE4D-216ENST00000507116 CERS3Q8IU89 383 aa8.03□□□□□ -1.12
PDE4D-216ENST00000507116 DNAJC2Q99543 621 aaKnown RBP8.03□□□□□ -1.12
PDE4D-216ENST00000507116 SLC20A2Q08357 652 aa8.03□□□□□ -1.12
PDE4D-216ENST00000507116 L1TD1Q5T7N2 865 aaKnown RBP8.03□□□□□ -1.12
PDE4D-216ENST00000507116 PRDM16Q9HAZ2 1276 aa8.03□□□□□ -1.12
PDE4D-216ENST00000507116 SOX12O15370 315 aa8.02□□□□□ -1.12
PDE4D-216ENST00000507116 LETM1O95202 739 aaPredicted RBP8.02□□□□□ -1.12
PDE4D-216ENST00000507116 CEP120Q8N960 986 aa8.02□□□□□ -1.13
PDE4D-216ENST00000507116 GTPBP4Q9BZE4 634 aaKnown RBP8.01□□□□□ -1.13
PDE4D-216ENST00000507116 ANAPC15P60006 121 aa8.01□□□□□ -1.13
PDE4D-216ENST00000507116 GPATCH11Q8N954 259 aa8.01□□□□□ -1.13
PDE4D-216ENST00000507116 E9PSI1 815 aa8.01□□□□□ -1.13
PDE4D-216ENST00000507116 RALBP1Q15311 655 aa8.01□□□□□ -1.13
PDE4D-216ENST00000507116 CC2D2BQ6DHV5 1058 aa8□□□□□ -1.13
PDE4D-216ENST00000507116 ZNF526Q8TF50 670 aaPredicted RBP8□□□□□ -1.13
PDE4D-216ENST00000507116 YY1AP1Q9H869 796 aa8□□□□□ -1.13
PDE4D-216ENST00000507116 GOLGA6L3A6NEY3 463 aa7.99□□□□□ -1.13
PDE4D-216ENST00000507116 NFKBIBQ15653 356 aa7.99□□□□□ -1.13
PDE4D-216ENST00000507116 CARD10Q9BWT7 1032 aa7.99□□□□□ -1.13
PDE4D-216ENST00000507116 NBPF20Q3BBV1 942 aa7.99□□□□□ -1.13
PDE4D-216ENST00000507116 GEMIN8Q9NWZ8 242 aaKnown RBP7.98□□□□□ -1.13
PDE4D-216ENST00000507116 EGFL6Q8IUX8 553 aa7.98□□□□□ -1.13
PDE4D-216ENST00000507116 MAFGO15525 162 aa7.96□□□□□ -1.14
PDE4D-216ENST00000507116 ZSCAN20P17040 1043 aaPredicted RBP7.96□□□□□ -1.14
PDE4D-216ENST00000507116 TERF1P54274 439 aa7.96□□□□□ -1.14
PDE4D-216ENST00000507116 NGEFQ8N5V2 710 aa7.96□□□□□ -1.14
PDE4D-216ENST00000507116 CWC22Q9HCG8 908 aaKnown RBP7.95□□□□□ -1.14
PDE4D-216ENST00000507116 TCERG1O14776 1098 aaKnown RBP7.94□□□□□ -1.14
PDE4D-216ENST00000507116 AEBP1Q8IUX7 1158 aa7.94□□□□□ -1.14
PDE4D-216ENST00000507116 RB1CC1Q8TDY2 1594 aa7.94□□□□□ -1.14
PDE4D-216ENST00000507116 HSP90AB3PQ58FF7 597 aa7.94□□□□□ -1.14
PDE4D-216ENST00000507116 EEA1Q15075 1411 aa7.94□□□□□ -1.14
PDE4D-216ENST00000507116 SH3BP1Q9Y3L3 701 aa7.93□□□□□ -1.14
PDE4D-216ENST00000507116 KCNH8Q96L42 1107 aa7.93□□□□□ -1.14
PDE4D-216ENST00000507116 NBPF1Q3BBV0 1214 aa7.93□□□□□ -1.14
PDE4D-216ENST00000507116 NBPF11Q86T75 865 aa7.93□□□□□ -1.14
PDE4D-216ENST00000507116 P3H3Q8IVL6 736 aa7.93□□□□□ -1.14
PDE4D-216ENST00000507116 TTC36A6NLP5 189 aa7.92□□□□□ -1.14
PDE4D-216ENST00000507116 KIAA1211Q6ZU35 1233 aa7.91□□□□□ -1.14
PDE4D-216ENST00000507116 ZNF692Q9BU19 519 aaPredicted RBP7.91□□□□□ -1.14
PDE4D-216ENST00000507116 IRX5P78411 483 aaPredicted RBP7.9□□□□□ -1.14
PDE4D-216ENST00000507116 FAM13BQ9NYF5 915 aa7.9□□□□□ -1.14
PDE4D-216ENST00000507116 ESPNB1AK53 854 aa7.9□□□□□ -1.15
PDE4D-216ENST00000507116 CCDC94Q9BW85 323 aaPredicted RBP7.9□□□□□ -1.15
PDE4D-216ENST00000507116 BANK1Q8NDB2 785 aa7.89□□□□□ -1.15
PDE4D-216ENST00000507116 SEMA3FQ13275 785 aa7.89□□□□□ -1.15
PDE4D-216ENST00000507116 B4GALNT3Q6L9W6 998 aa7.89□□□□□ -1.15
PDE4D-216ENST00000507116 CGNQ9P2M7 1197 aaKnown RBP7.89□□□□□ -1.15
PDE4D-216ENST00000507116 RIPK4P57078 832 aa7.88□□□□□ -1.15
PDE4D-216ENST00000507116 LMOD3Q0VAK6 560 aa7.88□□□□□ -1.15
PDE4D-216ENST00000507116 BAZ1BQ9UIG0 1483 aaKnown RBP7.88□□□□□ -1.15
PDE4D-216ENST00000507116 ZBTB22O15209 634 aa7.88□□□□□ -1.15
PDE4D-216ENST00000507116 TRIM52Q96A61 297 aa7.88□□□□□ -1.15
PDE4D-216ENST00000507116 PLEKHD1A6NEE1 506 aa7.87□□□□□ -1.15
PDE4D-216ENST00000507116 CCER2I3L3R5 266 aa7.87□□□□□ -1.15
PDE4D-216ENST00000507116 IRF6O14896 467 aa7.87□□□□□ -1.15
PDE4D-216ENST00000507116 TSPYL1Q9H0U9 437 aa7.87□□□□□ -1.15
PDE4D-216ENST00000507116 NBPF9Q3BBW0 867 aa7.87□□□□□ -1.15
PDE4D-216ENST00000507116 TRHP20396 242 aaPredicted RBP7.86□□□□□ -1.15
PDE4D-216ENST00000507116 SATB1Q01826 763 aa7.86□□□□□ -1.15
PDE4D-216ENST00000507116 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.86□□□□□ -1.15
PDE4D-216ENST00000507116 CDCA8Q53HL2 280 aa7.85□□□□□ -1.15
PDE4D-216ENST00000507116 GOLIM4O00461 696 aa7.85□□□□□ -1.15
PDE4D-216ENST00000507116 MAP2K1Q02750 393 aaPredicted RBP7.85□□□□□ -1.15
PDE4D-216ENST00000507116 CHMP4CQ96CF2 233 aa7.85□□□□□ -1.15
PDE4D-216ENST00000507116 PRR29P0C7W0 189 aa7.85□□□□□ -1.15
PDE4D-216ENST00000507116 ZNF500O60304 480 aaPredicted RBP7.84□□□□□ -1.15
PDE4D-216ENST00000507116 CASC1Q6TDU7 716 aa7.84□□□□□ -1.15
PDE4D-216ENST00000507116 RAI14Q9P0K7 980 aa7.84□□□□□ -1.15
PDE4D-216ENST00000507116 MPNDQ8N594 471 aa7.84□□□□□ -1.15
PDE4D-216ENST00000507116 TMC1Q8TDI8 760 aa7.84□□□□□ -1.15
PDE4D-216ENST00000507116 EFCC1Q9HA90 598 aa7.84□□□□□ -1.15
PDE4D-216ENST00000507116 NACADO15069 1562 aa7.84□□□□□ -1.16
PDE4D-216ENST00000507116 CCDC27Q2M243 656 aa7.84□□□□□ -1.16
PDE4D-216ENST00000507116 SSR1P43307 286 aaKnown RBP7.83□□□□□ -1.16
PDE4D-216ENST00000507116 DYNC1I1O14576 645 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms