RNA–Protein interactions for RNA: ENST00000506974.5

NDUFS4-204, Transcript of NADH:ubiquinone oxidoreductase subunit S4, humanhuman

TSL 1 (best)

Gene NDUFS4, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4-204ENST00000506974 RTN4Q9NQC3 1192 aaKnown RBP15.6■□□□□ 0.09
NDUFS4-204ENST00000506974 ABCC10Q5T3U5 1492 aa15.59■□□□□ 0.09
NDUFS4-204ENST00000506974 SUPT6HQ7KZ85 1726 aaKnown RBP15.59■□□□□ 0.09
NDUFS4-204ENST00000506974 ARID3CA6NKF2 412 aa15.58■□□□□ 0.08
NDUFS4-204ENST00000506974 C1QBPQ07021 282 aaKnown RBP15.58■□□□□ 0.08
NDUFS4-204ENST00000506974 KANK4Q5T7N3 995 aaPredicted RBP15.57■□□□□ 0.08
NDUFS4-204ENST00000506974 KIF14Q15058 1648 aa15.57■□□□□ 0.08
NDUFS4-204ENST00000506974 TROQ12816 1431 aaPredicted RBP15.55■□□□□ 0.08
NDUFS4-204ENST00000506974 FAM69CQ0P6D2 419 aa15.54■□□□□ 0.08
NDUFS4-204ENST00000506974 MTUS2Q5JR59 1369 aa15.53■□□□□ 0.08
NDUFS4-204ENST00000506974 SPINK5Q9NQ38 1064 aaPredicted RBP15.53■□□□□ 0.08
NDUFS4-204ENST00000506974 KIF13AQ9H1H9 1805 aa15.51■□□□□ 0.07
NDUFS4-204ENST00000506974 WDR7Q9Y4E6 1490 aa15.51■□□□□ 0.07
NDUFS4-204ENST00000506974 CDC42BPAQ5VT25 1732 aa15.51■□□□□ 0.07
NDUFS4-204ENST00000506974 ASXL2Q76L83 1435 aa15.51■□□□□ 0.07
NDUFS4-204ENST00000506974 PPARGC1BQ86YN6 1023 aaKnown RBP15.5■□□□□ 0.07
NDUFS4-204ENST00000506974 DIP2BQ9P265 1576 aa15.49■□□□□ 0.07
NDUFS4-204ENST00000506974 NCOA2Q15596 1464 aa15.49■□□□□ 0.07
NDUFS4-204ENST00000506974 CAPN15O75808 1086 aa15.49■□□□□ 0.07
NDUFS4-204ENST00000506974 CDK11AQ9UQ88 783 aaPredicted RBP15.49■□□□□ 0.07
NDUFS4-204ENST00000506974 TTC37Q6PGP7 1564 aa15.49■□□□□ 0.07
NDUFS4-204ENST00000506974 ITSN2Q9NZM3 1697 aa15.48■□□□□ 0.07
NDUFS4-204ENST00000506974 GLI2P10070 1586 aa15.48■□□□□ 0.07
NDUFS4-204ENST00000506974 MYO5CQ9NQX4 1742 aa15.48■□□□□ 0.07
NDUFS4-204ENST00000506974 ABCA9Q8IUA7 1624 aa15.47■□□□□ 0.07
NDUFS4-204ENST00000506974 PLEKHD1A6NEE1 506 aa15.47■□□□□ 0.07
NDUFS4-204ENST00000506974 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.47■□□□□ 0.07
NDUFS4-204ENST00000506974 SPDYE4A6NLX3 237 aa15.46■□□□□ 0.07
NDUFS4-204ENST00000506974 MKRN4PQ13434 485 aaPredicted RBP15.46■□□□□ 0.07
NDUFS4-204ENST00000506974 CDC42BPBQ9Y5S2 1711 aa15.46■□□□□ 0.06
NDUFS4-204ENST00000506974 POLA2Q14181 598 aa15.45■□□□□ 0.06
NDUFS4-204ENST00000506974 PREX2Q70Z35 1606 aa15.45■□□□□ 0.06
NDUFS4-204ENST00000506974 PHLDB1Q86UU1 1377 aa15.43■□□□□ 0.06
NDUFS4-204ENST00000506974 FBXO3Q9UK99 471 aa15.41■□□□□ 0.06
NDUFS4-204ENST00000506974 MAP3K4Q9Y6R4 1608 aa15.41■□□□□ 0.06
NDUFS4-204ENST00000506974 ZBTB12Q9Y330 459 aaPredicted RBP15.4■□□□□ 0.06
NDUFS4-204ENST00000506974 MYOM3Q5VTT5 1437 aa15.4■□□□□ 0.06
NDUFS4-204ENST00000506974 GPATCH8Q9UKJ3 1502 aaKnown RBP15.39■□□□□ 0.05
NDUFS4-204ENST00000506974 PTPN23Q9H3S7 1636 aa15.38■□□□□ 0.05
NDUFS4-204ENST00000506974 ARAP3Q8WWN8 1544 aa15.38■□□□□ 0.05
NDUFS4-204ENST00000506974 RRBP1Q9P2E9 1410 aaKnown RBP15.37■□□□□ 0.05
NDUFS4-204ENST00000506974 FGD6Q6ZV73 1430 aa15.36■□□□□ 0.05
NDUFS4-204ENST00000506974 PPRC1Q5VV67 1664 aaKnown RBP15.36■□□□□ 0.05
NDUFS4-204ENST00000506974 CCNB3Q8WWL7 1395 aa15.36■□□□□ 0.05
NDUFS4-204ENST00000506974 PROM2Q8N271 834 aa15.35■□□□□ 0.05
NDUFS4-204ENST00000506974 KCNH8Q96L42 1107 aa15.35■□□□□ 0.05
NDUFS4-204ENST00000506974 MIA2Q96PC5 1412 aa15.34■□□□□ 0.05
NDUFS4-204ENST00000506974 TEX14Q8IWB6 1497 aa15.34■□□□□ 0.05
NDUFS4-204ENST00000506974 TCOF1Q13428 1488 aaKnown RBP15.33■□□□□ 0.05
NDUFS4-204ENST00000506974 TSPOAP1O95153 1857 aa15.33■□□□□ 0.05
NDUFS4-204ENST00000506974 SAMD9LQ8IVG5 1584 aa15.33■□□□□ 0.05
NDUFS4-204ENST00000506974 PLCH2O75038 1416 aa15.32■□□□□ 0.04
NDUFS4-204ENST00000506974 CFAP74Q9C0B2 1584 aa15.32■□□□□ 0.04
NDUFS4-204ENST00000506974 CD109Q6YHK3 1445 aa15.31■□□□□ 0.04
NDUFS4-204ENST00000506974 ARHGAP5Q13017 1502 aa15.31■□□□□ 0.04
NDUFS4-204ENST00000506974 CROCC2H7BZ55 1655 aa15.29■□□□□ 0.04
NDUFS4-204ENST00000506974 CAMSAP2Q08AD1 1489 aa15.29■□□□□ 0.04
NDUFS4-204ENST00000506974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.28■□□□□ 0.04
NDUFS4-204ENST00000506974 DNMT1P26358 1616 aaKnown RBP15.28■□□□□ 0.04
NDUFS4-204ENST00000506974 ABCC1P33527 1531 aa15.27■□□□□ 0.04
NDUFS4-204ENST00000506974 KDM6BO15054 1643 aa15.27■□□□□ 0.03
NDUFS4-204ENST00000506974 FANCAO15360 1455 aa15.26■□□□□ 0.03
NDUFS4-204ENST00000506974 ARHGEF5Q12774 1597 aa15.25■□□□□ 0.03
NDUFS4-204ENST00000506974 TRIM26Q12899 539 aaPredicted RBP15.25■□□□□ 0.03
NDUFS4-204ENST00000506974 CFDP1Q9UEE9 299 aaPredicted RBP15.25■□□□□ 0.03
NDUFS4-204ENST00000506974 SYCP2Q9BX26 1530 aa15.23■□□□□ 0.03
NDUFS4-204ENST00000506974 ZNF644Q9H582 1327 aaPredicted RBP15.22■□□□□ 0.03
NDUFS4-204ENST00000506974 PLEKHH2Q8IVE3 1493 aa15.22■□□□□ 0.03
NDUFS4-204ENST00000506974 NEO1Q92859 1461 aa15.22■□□□□ 0.03
NDUFS4-204ENST00000506974 ARHGEF12Q9NZN5 1544 aa15.22■□□□□ 0.03
NDUFS4-204ENST00000506974 ADGBQ8N7X0 1667 aa15.22■□□□□ 0.03
NDUFS4-204ENST00000506974 MBD5Q9P267 1494 aa15.21■□□□□ 0.03
NDUFS4-204ENST00000506974 RICTORQ6R327 1708 aa15.2■□□□□ 0.02
NDUFS4-204ENST00000506974 KIAA1107Q9UPP5 1409 aa15.2■□□□□ 0.02
NDUFS4-204ENST00000506974 EFCAB2Q5VUJ9 269 aa15.2■□□□□ 0.02
NDUFS4-204ENST00000506974 ABCB7O75027 752 aa15.19■□□□□ 0.02
NDUFS4-204ENST00000506974 DAPK1P53355 1430 aa15.18■□□□□ 0.02
NDUFS4-204ENST00000506974 AKNAQ7Z591 1439 aa15.18■□□□□ 0.02
NDUFS4-204ENST00000506974 FAM50AQ14320 339 aaKnown RBP15.18■□□□□ 0.02
NDUFS4-204ENST00000506974 ADGRL1O94910 1474 aa15.18■□□□□ 0.02
NDUFS4-204ENST00000506974 COL17A1Q9UMD9 1497 aaPredicted RBP15.18■□□□□ 0.02
NDUFS4-204ENST00000506974 MAST1Q9Y2H9 1570 aa15.18■□□□□ 0.02
NDUFS4-204ENST00000506974 ABCC5O15440 1437 aa15.17■□□□□ 0.02
NDUFS4-204ENST00000506974 PTPRKQ15262 1439 aa15.17■□□□□ 0.02
NDUFS4-204ENST00000506974 ZNF777Q9ULD5 760 aaPredicted RBP15.17■□□□□ 0.02
NDUFS4-204ENST00000506974 CCDC141Q6ZP82 1450 aa15.16■□□□□ 0.02
NDUFS4-204ENST00000506974 SHANK2Q9UPX8 1470 aa15.16■□□□□ 0.02
NDUFS4-204ENST00000506974 SLC24A1O60721 1099 aa15.16■□□□□ 0.02
NDUFS4-204ENST00000506974 FRMPD1Q5SYB0 1578 aa15.15■□□□□ 0.02
NDUFS4-204ENST00000506974 GCC2Q8IWJ2 1684 aa15.15■□□□□ 0.02
NDUFS4-204ENST00000506974 KDM5CP41229 1560 aa15.15■□□□□ 0.02
NDUFS4-204ENST00000506974 TRAPPC8Q9Y2L5 1435 aa15.14■□□□□ 0.01
NDUFS4-204ENST00000506974 INO80Q9ULG1 1556 aaPredicted RBP15.14■□□□□ 0.01
NDUFS4-204ENST00000506974 POGZQ7Z3K3 1410 aa15.12■□□□□ 0.01
NDUFS4-204ENST00000506974 SCAPERQ9BY12 1400 aa15.12■□□□□ 0.01
NDUFS4-204ENST00000506974 KIDINS220Q9ULH0 1771 aa15.12■□□□□ 0.01
NDUFS4-204ENST00000506974 HNRNPMP52272 730 aaKnown RBP eCLIP15.12■□□□□ 0.012e-7■■■■■ 29.2
NDUFS4-204ENST00000506974 ADGRL2O95490 1459 aa15.12■□□□□ 0.01
NDUFS4-204ENST00000506974 PLXNC1O60486 1568 aa15.11■□□□□ 0.01
NDUFS4-204ENST00000506974 DSG3P32926 999 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms