RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 HSPA2P54652 639 aa21.07■□□□□ 0.96
TCOF1-209ENST00000506630 RIMS1Q86UR5 1692 aaKnown RBP21.07■□□□□ 0.96
TCOF1-209ENST00000506630 FYCO1Q9BQS8 1478 aa21.07■□□□□ 0.96
TCOF1-209ENST00000506630 CFAP74Q9C0B2 1584 aa21.06■□□□□ 0.96
TCOF1-209ENST00000506630 RICTORQ6R327 1708 aa21.04■□□□□ 0.96
TCOF1-209ENST00000506630 CCDC18Q5T9S5 1454 aa21.03■□□□□ 0.96
TCOF1-209ENST00000506630 MAGI2Q86UL8 1455 aa21.03■□□□□ 0.96
TCOF1-209ENST00000506630 MLECQ14165 292 aa21.02■□□□□ 0.96
TCOF1-209ENST00000506630 ZFYVE16Q7Z3T8 1539 aa21.02■□□□□ 0.96
TCOF1-209ENST00000506630 ZMYM4Q5VZL5 1548 aa21.01■□□□□ 0.95
TCOF1-209ENST00000506630 YEATS2Q9ULM3 1422 aa21.01■□□□□ 0.95
TCOF1-209ENST00000506630 KIF14Q15058 1648 aa21■□□□□ 0.95
TCOF1-209ENST00000506630 CDK11AQ9UQ88 783 aaPredicted RBP20.98■□□□□ 0.95
TCOF1-209ENST00000506630 SCAPERQ9BY12 1400 aa20.97■□□□□ 0.95
TCOF1-209ENST00000506630 CERKQ8TCT0 537 aa20.97■□□□□ 0.95
TCOF1-209ENST00000506630 MYO5CQ9NQX4 1742 aa20.97■□□□□ 0.95
TCOF1-209ENST00000506630 PLCH2O75038 1416 aa20.95■□□□□ 0.94
TCOF1-209ENST00000506630 TROQ12816 1431 aaPredicted RBP20.95■□□□□ 0.94
TCOF1-209ENST00000506630 EFCAB2Q5VUJ9 269 aa20.93■□□□□ 0.94
TCOF1-209ENST00000506630 SIGLEC1Q9BZZ2 1709 aa20.92■□□□□ 0.94
TCOF1-209ENST00000506630 ATP10AO60312 1499 aa20.9■□□□□ 0.94
TCOF1-209ENST00000506630 C9orf84Q5VXU9 1444 aa20.88■□□□□ 0.93
TCOF1-209ENST00000506630 VPS8Q8N3P4 1428 aa20.87■□□□□ 0.93
TCOF1-209ENST00000506630 FER1L4A9Z1Z3 1794 aa20.87■□□□□ 0.93
TCOF1-209ENST00000506630 DMRT2Q9Y5R5 561 aa20.86■□□□□ 0.93
TCOF1-209ENST00000506630 ARHGEF12Q9NZN5 1544 aa20.85■□□□□ 0.93
TCOF1-209ENST00000506630 CDC42BPBQ9Y5S2 1711 aa20.85■□□□□ 0.93
TCOF1-209ENST00000506630 CEBPAP49715 358 aaPredicted RBP20.85■□□□□ 0.93
TCOF1-209ENST00000506630 CDC42BPAQ5VT25 1732 aa20.84■□□□□ 0.93
TCOF1-209ENST00000506630 MYT1LQ9UL68 1186 aa20.84■□□□□ 0.93
TCOF1-209ENST00000506630 PREX2Q70Z35 1606 aa20.83■□□□□ 0.93
TCOF1-209ENST00000506630 ZNF518AQ6AHZ1 1483 aa20.81■□□□□ 0.92
TCOF1-209ENST00000506630 EHBP1L1Q8N3D4 1523 aa20.81■□□□□ 0.92
TCOF1-209ENST00000506630 ARHGAP5Q13017 1502 aa20.8■□□□□ 0.92
TCOF1-209ENST00000506630 AFAP1Q8N556 730 aa20.8■□□□□ 0.92
TCOF1-209ENST00000506630 MTUS2Q5JR59 1369 aa20.8■□□□□ 0.92
TCOF1-209ENST00000506630 TIAM1Q13009 1591 aa20.8■□□□□ 0.92
TCOF1-209ENST00000506630 PREX1Q8TCU6 1659 aa20.79■□□□□ 0.92
TCOF1-209ENST00000506630 UHRF1BP1Q6BDS2 1440 aa20.78■□□□□ 0.92
TCOF1-209ENST00000506630 ESF1Q9H501 851 aaKnown RBP20.76■□□□□ 0.91
TCOF1-209ENST00000506630 SUPT6HQ7KZ85 1726 aaKnown RBP20.75■□□□□ 0.91
TCOF1-209ENST00000506630 ITSN2Q9NZM3 1697 aa20.73■□□□□ 0.91
TCOF1-209ENST00000506630 DISP3Q9P2K9 1392 aa20.72■□□□□ 0.91
TCOF1-209ENST00000506630 KDM5CP41229 1560 aa20.72■□□□□ 0.91
TCOF1-209ENST00000506630 TRAPPC8Q9Y2L5 1435 aa20.71■□□□□ 0.91
TCOF1-209ENST00000506630 MLH3Q9UHC1 1453 aa20.69■□□□□ 0.9
TCOF1-209ENST00000506630 SETD1BQ9UPS6 1966 aaKnown RBP20.68■□□□□ 0.9
TCOF1-209ENST00000506630 ABCC1P33527 1531 aa20.68■□□□□ 0.9
TCOF1-209ENST00000506630 MAP3K1Q13233 1512 aa20.68■□□□□ 0.9
TCOF1-209ENST00000506630 GPATCH8Q9UKJ3 1502 aaKnown RBP20.68■□□□□ 0.9
TCOF1-209ENST00000506630 REREQ9P2R6 1566 aa20.68■□□□□ 0.9
TCOF1-209ENST00000506630 DIP2CQ9Y2E4 1556 aa20.68■□□□□ 0.9
TCOF1-209ENST00000506630 CCNB3Q8WWL7 1395 aa20.67■□□□□ 0.9
TCOF1-209ENST00000506630 PTPRTO14522 1441 aa20.67■□□□□ 0.9
TCOF1-209ENST00000506630 STRCQ7RTU9 1775 aa20.67■□□□□ 0.9
TCOF1-209ENST00000506630 LRRC9Q6ZRR7 1453 aa20.66■□□□□ 0.9
TCOF1-209ENST00000506630 SAMD9LQ8IVG5 1584 aa20.66■□□□□ 0.9
TCOF1-209ENST00000506630 ABCA6Q8N139 1617 aa20.64■□□□□ 0.9
TCOF1-209ENST00000506630 ZNF777Q9ULD5 760 aaPredicted RBP20.64■□□□□ 0.89
TCOF1-209ENST00000506630 AGLP35573 1532 aa20.63■□□□□ 0.89
TCOF1-209ENST00000506630 NCOA2Q15596 1464 aa20.63■□□□□ 0.89
TCOF1-209ENST00000506630 ILDR2Q71H61 639 aa20.63■□□□□ 0.89
TCOF1-209ENST00000506630 PHF23Q9BUL5 403 aaPredicted RBP20.63■□□□□ 0.89
TCOF1-209ENST00000506630 SOCS7O14512 581 aa20.62■□□□□ 0.89
TCOF1-209ENST00000506630 HNRNPMP52272 730 aaKnown RBP eCLIP20.62■□□□□ 0.89
TCOF1-209ENST00000506630 KIDINS220Q9ULH0 1771 aa20.62■□□□□ 0.89
TCOF1-209ENST00000506630 APLP2Q06481 763 aa20.61■□□□□ 0.89
TCOF1-209ENST00000506630 CNTLNQ9NXG0 1405 aa20.61■□□□□ 0.89
TCOF1-209ENST00000506630 SYCP2Q9BX26 1530 aa20.6■□□□□ 0.89
TCOF1-209ENST00000506630 C3P01024 1663 aa20.59■□□□□ 0.89
TCOF1-209ENST00000506630 CFDP1Q9UEE9 299 aaPredicted RBP20.59■□□□□ 0.89
TCOF1-209ENST00000506630 ZNF644Q9H582 1327 aaPredicted RBP20.57■□□□□ 0.88
TCOF1-209ENST00000506630 KANK4Q5T7N3 995 aaPredicted RBP20.56■□□□□ 0.88
TCOF1-209ENST00000506630 PLEKHH2Q8IVE3 1493 aa20.55■□□□□ 0.88
TCOF1-209ENST00000506630 NCOA1Q15788 1441 aa20.54■□□□□ 0.88
TCOF1-209ENST00000506630 IQSEC2Q5JU85 1478 aa20.53■□□□□ 0.88
TCOF1-209ENST00000506630 LTBP4Q8N2S1 1624 aa20.53■□□□□ 0.88
TCOF1-209ENST00000506630 NPATQ14207 1427 aa20.52■□□□□ 0.87
TCOF1-209ENST00000506630 SPAG9O60271 1321 aaKnown RBP20.52■□□□□ 0.87
TCOF1-209ENST00000506630 ZMYM3Q14202 1370 aa20.51■□□□□ 0.87
TCOF1-209ENST00000506630 CAMSAP2Q08AD1 1489 aa20.5■□□□□ 0.87
TCOF1-209ENST00000506630 SPATA31D1Q6ZQQ2 1576 aa20.5■□□□□ 0.87
TCOF1-209ENST00000506630 KIAA1107Q9UPP5 1409 aa20.49■□□□□ 0.87
TCOF1-209ENST00000506630 CAMSAP1Q5T5Y3 1602 aa20.47■□□□□ 0.87
TCOF1-209ENST00000506630 MYOM3Q5VTT5 1437 aa20.46■□□□□ 0.87
TCOF1-209ENST00000506630 MBD5Q9P267 1494 aa20.46■□□□□ 0.87
TCOF1-209ENST00000506630 NCKAP5LQ9HCH0 1330 aa20.46■□□□□ 0.87
TCOF1-209ENST00000506630 INO80Q9ULG1 1556 aaPredicted RBP20.46■□□□□ 0.87
TCOF1-209ENST00000506630 ATP7AQ04656 1500 aa20.45■□□□□ 0.86
TCOF1-209ENST00000506630 PKD2Q13563 968 aa20.44■□□□□ 0.86
TCOF1-209ENST00000506630 MROH2AA6NES4 1674 aa20.44■□□□□ 0.86
TCOF1-209ENST00000506630 UBAP1LF5GYI3 381 aa20.43■□□□□ 0.86
TCOF1-209ENST00000506630 GGT6Q6P531 493 aa20.42■□□□□ 0.86
TCOF1-209ENST00000506630 ZNF335Q9H4Z2 1342 aaPredicted RBP20.42■□□□□ 0.86
TCOF1-209ENST00000506630 ARHGEF5Q12774 1597 aa20.42■□□□□ 0.86
TCOF1-209ENST00000506630 CCDC141Q6ZP82 1450 aa20.41■□□□□ 0.86
TCOF1-209ENST00000506630 PTPN23Q9H3S7 1636 aa20.41■□□□□ 0.86
TCOF1-209ENST00000506630 ADGBQ8N7X0 1667 aa20.4■□□□□ 0.86
TCOF1-209ENST00000506630 MIA2Q96PC5 1412 aa20.4■□□□□ 0.86
TCOF1-209ENST00000506630 A2MP01023 1474 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms