RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 ABCC10Q5T3U5 1492 aa17.78■□□□□ 0.44
LIN54-206ENST00000506560 DNMT1P26358 1616 aaKnown RBP17.78■□□□□ 0.44
LIN54-206ENST00000506560 GCC2Q8IWJ2 1684 aa17.77■□□□□ 0.43
LIN54-206ENST00000506560 CDC42BPAQ5VT25 1732 aa17.76■□□□□ 0.43
LIN54-206ENST00000506560 TRIM52Q96A61 297 aa17.75■□□□□ 0.43
LIN54-206ENST00000506560 DENND4BO75064 1496 aaPredicted RBP17.75■□□□□ 0.43
LIN54-206ENST00000506560 ITSN2Q9NZM3 1697 aa17.74■□□□□ 0.43
LIN54-206ENST00000506560 FOXD1Q16676 465 aa17.73■□□□□ 0.43
LIN54-206ENST00000506560 AKNAQ7Z591 1439 aa17.72■□□□□ 0.43
LIN54-206ENST00000506560 ABCC2Q92887 1545 aa17.71■□□□□ 0.43
LIN54-206ENST00000506560 KCNH8Q96L42 1107 aa17.69■□□□□ 0.42
LIN54-206ENST00000506560 ROCK1Q13464 1354 aa17.68■□□□□ 0.42
LIN54-206ENST00000506560 HNRNPMP52272 730 aaKnown RBP eCLIP17.68■□□□□ 0.42
LIN54-206ENST00000506560 TTC37Q6PGP7 1564 aa17.66■□□□□ 0.42
LIN54-206ENST00000506560 MPHOSPH9Q99550 1183 aa17.66■□□□□ 0.42
LIN54-206ENST00000506560 NCOA1Q15788 1441 aa17.66■□□□□ 0.42
LIN54-206ENST00000506560 CDC42BPBQ9Y5S2 1711 aa17.65■□□□□ 0.42
LIN54-206ENST00000506560 MIER1Q8N108 512 aa17.64■□□□□ 0.41
LIN54-206ENST00000506560 CROCC2H7BZ55 1655 aa17.63■□□□□ 0.41
LIN54-206ENST00000506560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.63■□□□□ 0.41
LIN54-206ENST00000506560 PPP1R15AO75807 674 aaPredicted RBP17.62■□□□□ 0.41
LIN54-206ENST00000506560 ZCCHC11Q5TAX3 1644 aaKnown RBP17.62■□□□□ 0.41
LIN54-206ENST00000506560 HIRIP3Q9BW71 556 aaPredicted RBP17.62■□□□□ 0.41
LIN54-206ENST00000506560 SAMD9LQ8IVG5 1584 aa17.62■□□□□ 0.41
LIN54-206ENST00000506560 TONSLQ96HA7 1378 aa17.61■□□□□ 0.41
LIN54-206ENST00000506560 PREX2Q70Z35 1606 aa17.6■□□□□ 0.41
LIN54-206ENST00000506560 MBD5Q9P267 1494 aa17.59■□□□□ 0.41
LIN54-206ENST00000506560 ADGBQ8N7X0 1667 aa17.59■□□□□ 0.41
LIN54-206ENST00000506560 C9orf84Q5VXU9 1444 aa17.59■□□□□ 0.41
LIN54-206ENST00000506560 ADGRL2O95490 1459 aa17.58■□□□□ 0.41
LIN54-206ENST00000506560 KDM5BQ9UGL1 1544 aa17.58■□□□□ 0.4
LIN54-206ENST00000506560 SLC4A1APQ9BWU0 796 aaKnown RBP17.57■□□□□ 0.4
LIN54-206ENST00000506560 ANKRD30AQ9BXX3 1397 aa17.57■□□□□ 0.4
LIN54-206ENST00000506560 ARHGAP5Q13017 1502 aa17.56■□□□□ 0.4
LIN54-206ENST00000506560 UHRF1BP1LA0JNW5 1464 aa17.56■□□□□ 0.4
LIN54-206ENST00000506560 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
LIN54-206ENST00000506560 TIMELESSQ9UNS1 1208 aa17.55■□□□□ 0.4
LIN54-206ENST00000506560 SYCP2Q9BX26 1530 aa17.55■□□□□ 0.4
LIN54-206ENST00000506560 PZPP20742 1482 aa17.55■□□□□ 0.4
LIN54-206ENST00000506560 TSPY4P0CV99 314 aa17.54■□□□□ 0.4
LIN54-206ENST00000506560 TSPY10P0CW01 314 aa17.54■□□□□ 0.4
LIN54-206ENST00000506560 ANKRD50Q9ULJ7 1429 aa17.54■□□□□ 0.4
LIN54-206ENST00000506560 ANKRD30BQ9BXX2 1392 aa17.52■□□□□ 0.4
LIN54-206ENST00000506560 SHANK2Q9UPX8 1470 aa17.51■□□□□ 0.39
LIN54-206ENST00000506560 MYO5CQ9NQX4 1742 aa17.51■□□□□ 0.39
LIN54-206ENST00000506560 ARHGEF12Q9NZN5 1544 aa17.51■□□□□ 0.39
LIN54-206ENST00000506560 KIF15Q9NS87 1388 aa17.51■□□□□ 0.39
LIN54-206ENST00000506560 ARHGEF5Q12774 1597 aa17.5■□□□□ 0.39
LIN54-206ENST00000506560 CCDC141Q6ZP82 1450 aa17.5■□□□□ 0.39
LIN54-206ENST00000506560 L3MBTL2Q969R5 705 aa17.48■□□□□ 0.39
LIN54-206ENST00000506560 PKD2Q13563 968 aa17.47■□□□□ 0.39
LIN54-206ENST00000506560 YTHDC1Q96MU7 727 aaKnown RBP17.47■□□□□ 0.39
LIN54-206ENST00000506560 PLCH2O75038 1416 aa17.47■□□□□ 0.39
LIN54-206ENST00000506560 NUP155O75694 1391 aa17.46■□□□□ 0.38
LIN54-206ENST00000506560 WDR7Q9Y4E6 1490 aa17.43■□□□□ 0.38
LIN54-206ENST00000506560 TRAPPC8Q9Y2L5 1435 aa17.43■□□□□ 0.38
LIN54-206ENST00000506560 RPRD2Q5VT52 1461 aaKnown RBP17.42■□□□□ 0.38
LIN54-206ENST00000506560 DDX10Q13206 875 aaKnown RBP17.42■□□□□ 0.38
LIN54-206ENST00000506560 EFCAB2Q5VUJ9 269 aa17.41■□□□□ 0.38
LIN54-206ENST00000506560 KIAA1107Q9UPP5 1409 aa17.41■□□□□ 0.38
LIN54-206ENST00000506560 NBPF8Q3BBV2 869 aa17.4■□□□□ 0.38
LIN54-206ENST00000506560 ASXL2Q76L83 1435 aa17.4■□□□□ 0.38
LIN54-206ENST00000506560 AFAP1Q8N556 730 aa17.4■□□□□ 0.38
LIN54-206ENST00000506560 TEX14Q8IWB6 1497 aa17.4■□□□□ 0.38
LIN54-206ENST00000506560 RSPH4AQ5TD94 716 aa17.39■□□□□ 0.37
LIN54-206ENST00000506560 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
LIN54-206ENST00000506560 ABCC1P33527 1531 aa17.38■□□□□ 0.37
LIN54-206ENST00000506560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.37
LIN54-206ENST00000506560 PLEKHH2Q8IVE3 1493 aa17.37■□□□□ 0.37
LIN54-206ENST00000506560 MAST1Q9Y2H9 1570 aa17.35■□□□□ 0.37
LIN54-206ENST00000506560 ACIN1Q9UKV3 1341 aaKnown RBP17.34■□□□□ 0.37
LIN54-206ENST00000506560 KDM5DQ9BY66 1539 aa17.33■□□□□ 0.36
LIN54-206ENST00000506560 HSPA5P11021 654 aaKnown RBP17.33■□□□□ 0.36
LIN54-206ENST00000506560 FAM135AQ9P2D6 1515 aa17.32■□□□□ 0.36
LIN54-206ENST00000506560 FANCAO15360 1455 aa17.32■□□□□ 0.36
LIN54-206ENST00000506560 ABCA9Q8IUA7 1624 aa17.32■□□□□ 0.36
LIN54-206ENST00000506560 ZNF326Q5BKZ1 582 aaKnown RBP17.31■□□□□ 0.36
LIN54-206ENST00000506560 PLXNC1O60486 1568 aa17.31■□□□□ 0.36
LIN54-206ENST00000506560 NPM1P06748 294 aaKnown RBP eCLIP17.29■□□□□ 0.36
LIN54-206ENST00000506560 SPAG9O60271 1321 aaKnown RBP17.29■□□□□ 0.36
LIN54-206ENST00000506560 ARAP3Q8WWN8 1544 aa17.27■□□□□ 0.35
LIN54-206ENST00000506560 SCAPERQ9BY12 1400 aa17.26■□□□□ 0.35
LIN54-206ENST00000506560 DUOX2Q9NRD8 1548 aa17.26■□□□□ 0.35
LIN54-206ENST00000506560 UNC13BO14795 1591 aa17.26■□□□□ 0.35
LIN54-206ENST00000506560 CYB5RLQ6IPT4 315 aa17.26■□□□□ 0.35
LIN54-206ENST00000506560 ADGRL1O94910 1474 aa17.26■□□□□ 0.35
LIN54-206ENST00000506560 ZFYVE16Q7Z3T8 1539 aa17.26■□□□□ 0.35
LIN54-206ENST00000506560 C11orf95C9JLR9 678 aaPredicted RBP17.25■□□□□ 0.35
LIN54-206ENST00000506560 EIF4G2P78344 907 aaKnown RBP eCLIP17.24■□□□□ 0.35
LIN54-206ENST00000506560 MYT1LQ9UL68 1186 aa17.24■□□□□ 0.35
LIN54-206ENST00000506560 KDM2AQ9Y2K7 1162 aa17.24■□□□□ 0.35
LIN54-206ENST00000506560 WASHC2AQ641Q2 1341 aa17.24■□□□□ 0.35
LIN54-206ENST00000506560 PLA2R1Q13018 1463 aa17.24■□□□□ 0.35
LIN54-206ENST00000506560 CENPBP07199 599 aaPredicted RBP17.22■□□□□ 0.35
LIN54-206ENST00000506560 ERBINQ96RT1 1412 aa17.22■□□□□ 0.35
LIN54-206ENST00000506560 IQGAP3Q86VI3 1631 aa17.2■□□□□ 0.34
LIN54-206ENST00000506560 ATP7AQ04656 1500 aa17.2■□□□□ 0.34
LIN54-206ENST00000506560 RGL3Q3MIN7 710 aa17.2■□□□□ 0.34
LIN54-206ENST00000506560 CD109Q6YHK3 1445 aa17.2■□□□□ 0.34
LIN54-206ENST00000506560 DCAF11Q8TEB1 546 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms