RNA–Protein interactions for RNA: ENST00000506178.1

SLC1A3-208, Transcript of solute carrier family 1 member 3, humanhuman

TSL 2

Gene SLC1A3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-208ENST00000506178 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.29
SLC1A3-208ENST00000506178 POGZQ7Z3K3 1410 aa16.88■□□□□ 0.29
SLC1A3-208ENST00000506178 SCAPERQ9BY12 1400 aa16.88■□□□□ 0.29
SLC1A3-208ENST00000506178 MAGI2Q86UL8 1455 aa16.88■□□□□ 0.29
SLC1A3-208ENST00000506178 MLECQ14165 292 aa16.86■□□□□ 0.29
SLC1A3-208ENST00000506178 ARHGEF12Q9NZN5 1544 aa16.84■□□□□ 0.29
SLC1A3-208ENST00000506178 ATP10AO60312 1499 aa16.82■□□□□ 0.28
SLC1A3-208ENST00000506178 ARHGAP35Q9NRY4 1499 aa16.82■□□□□ 0.28
SLC1A3-208ENST00000506178 FER1L4A9Z1Z3 1794 aa16.82■□□□□ 0.28
SLC1A3-208ENST00000506178 KIF14Q15058 1648 aa16.81■□□□□ 0.28
SLC1A3-208ENST00000506178 CEBPAP49715 358 aaPredicted RBP16.8■□□□□ 0.28
SLC1A3-208ENST00000506178 EHMT2Q96KQ7 1210 aa16.8■□□□□ 0.28
SLC1A3-208ENST00000506178 EFCAB2Q5VUJ9 269 aa16.79■□□□□ 0.28
SLC1A3-208ENST00000506178 CERKQ8TCT0 537 aa16.79■□□□□ 0.28
SLC1A3-208ENST00000506178 C9orf84Q5VXU9 1444 aa16.79■□□□□ 0.28
SLC1A3-208ENST00000506178 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
SLC1A3-208ENST00000506178 MYO5CQ9NQX4 1742 aa16.77■□□□□ 0.28
SLC1A3-208ENST00000506178 AFAP1Q8N556 730 aa16.77■□□□□ 0.28
SLC1A3-208ENST00000506178 FMN1Q68DA7 1419 aa16.77■□□□□ 0.27
SLC1A3-208ENST00000506178 ATP1B4Q9UN42 357 aaPredicted RBP16.76■□□□□ 0.27
SLC1A3-208ENST00000506178 KDM5CP41229 1560 aa16.76■□□□□ 0.27
SLC1A3-208ENST00000506178 LRRIQ1Q96JM4 1722 aa16.75■□□□□ 0.27
SLC1A3-208ENST00000506178 TROQ12816 1431 aaPredicted RBP16.74■□□□□ 0.27
SLC1A3-208ENST00000506178 UBTFP17480 764 aaKnown RBP16.74■□□□□ 0.27
SLC1A3-208ENST00000506178 ZNF518AQ6AHZ1 1483 aa16.73■□□□□ 0.27
SLC1A3-208ENST00000506178 PREX1Q8TCU6 1659 aa16.72■□□□□ 0.27
SLC1A3-208ENST00000506178 STRCQ7RTU9 1775 aa16.72■□□□□ 0.27
SLC1A3-208ENST00000506178 DIP2CQ9Y2E4 1556 aa16.72■□□□□ 0.27
SLC1A3-208ENST00000506178 ARHGAP5Q13017 1502 aa16.71■□□□□ 0.27
SLC1A3-208ENST00000506178 CDK11AQ9UQ88 783 aaPredicted RBP16.7■□□□□ 0.26
SLC1A3-208ENST00000506178 CDC42BPBQ9Y5S2 1711 aa16.7■□□□□ 0.26
SLC1A3-208ENST00000506178 ABCA6Q8N139 1617 aa16.69■□□□□ 0.26
SLC1A3-208ENST00000506178 TRAPPC8Q9Y2L5 1435 aa16.69■□□□□ 0.26
SLC1A3-208ENST00000506178 REREQ9P2R6 1566 aa16.68■□□□□ 0.26
SLC1A3-208ENST00000506178 MLH3Q9UHC1 1453 aa16.67■□□□□ 0.26
SLC1A3-208ENST00000506178 MSH5O43196 834 aa16.65■□□□□ 0.26
SLC1A3-208ENST00000506178 ADRA2BP18089 450 aa16.65■□□□□ 0.26
SLC1A3-208ENST00000506178 CLIP1P30622 1438 aa16.64■□□□□ 0.25
SLC1A3-208ENST00000506178 ABCC1P33527 1531 aa16.64■□□□□ 0.25
SLC1A3-208ENST00000506178 UHRF1BP1Q6BDS2 1440 aa16.63■□□□□ 0.25
SLC1A3-208ENST00000506178 C3P01024 1663 aa16.63■□□□□ 0.25
SLC1A3-208ENST00000506178 PIAS4Q8N2W9 510 aaPredicted RBP16.63■□□□□ 0.25
SLC1A3-208ENST00000506178 AGLP35573 1532 aa16.63■□□□□ 0.25
SLC1A3-208ENST00000506178 PREX2Q70Z35 1606 aa16.63■□□□□ 0.25
SLC1A3-208ENST00000506178 SETD1BQ9UPS6 1966 aaKnown RBP16.61■□□□□ 0.25
SLC1A3-208ENST00000506178 ITSN2Q9NZM3 1697 aa16.61■□□□□ 0.25
SLC1A3-208ENST00000506178 KIDINS220Q9ULH0 1771 aa16.61■□□□□ 0.25
SLC1A3-208ENST00000506178 CASKIN1Q8WXD9 1431 aa16.61■□□□□ 0.25
SLC1A3-208ENST00000506178 MYT1LQ9UL68 1186 aa16.6■□□□□ 0.25
SLC1A3-208ENST00000506178 DMRT2Q9Y5R5 561 aa16.6■□□□□ 0.25
SLC1A3-208ENST00000506178 ILDR2Q71H61 639 aa16.59■□□□□ 0.25
SLC1A3-208ENST00000506178 PTPRTO14522 1441 aa16.59■□□□□ 0.25
SLC1A3-208ENST00000506178 CDC42BPAQ5VT25 1732 aa16.58■□□□□ 0.24
SLC1A3-208ENST00000506178 LTBP4Q8N2S1 1624 aa16.57■□□□□ 0.24
SLC1A3-208ENST00000506178 SAMD9LQ8IVG5 1584 aa16.55■□□□□ 0.24
SLC1A3-208ENST00000506178 CCDC18Q5T9S5 1454 aa16.55■□□□□ 0.24
SLC1A3-208ENST00000506178 NCOA1Q15788 1441 aa16.54■□□□□ 0.24
SLC1A3-208ENST00000506178 GPATCH8Q9UKJ3 1502 aaKnown RBP16.53■□□□□ 0.24
SLC1A3-208ENST00000506178 CNTLNQ9NXG0 1405 aa16.52■□□□□ 0.23
SLC1A3-208ENST00000506178 DISP3Q9P2K9 1392 aa16.51■□□□□ 0.23
SLC1A3-208ENST00000506178 HNRNPMP52272 730 aaKnown RBP eCLIP16.51■□□□□ 0.23
SLC1A3-208ENST00000506178 SYCP2Q9BX26 1530 aa16.5■□□□□ 0.23
SLC1A3-208ENST00000506178 FYCO1Q9BQS8 1478 aa16.5■□□□□ 0.23
SLC1A3-208ENST00000506178 ZNF777Q9ULD5 760 aaPredicted RBP16.5■□□□□ 0.23
SLC1A3-208ENST00000506178 ZMYM3Q14202 1370 aa16.5■□□□□ 0.23
SLC1A3-208ENST00000506178 NPATQ14207 1427 aa16.49■□□□□ 0.23
SLC1A3-208ENST00000506178 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
SLC1A3-208ENST00000506178 ESF1Q9H501 851 aaKnown RBP16.49■□□□□ 0.23
SLC1A3-208ENST00000506178 CAMSAP1Q5T5Y3 1602 aa16.48■□□□□ 0.23
SLC1A3-208ENST00000506178 SPAG9O60271 1321 aaKnown RBP16.47■□□□□ 0.23
SLC1A3-208ENST00000506178 MROH2AA6NES4 1674 aa16.47■□□□□ 0.23
SLC1A3-208ENST00000506178 PLXNC1O60486 1568 aa16.47■□□□□ 0.23
SLC1A3-208ENST00000506178 NCKAP5LQ9HCH0 1330 aa16.46■□□□□ 0.23
SLC1A3-208ENST00000506178 SUPT6HQ7KZ85 1726 aaKnown RBP16.46■□□□□ 0.23
SLC1A3-208ENST00000506178 INO80Q9ULG1 1556 aaPredicted RBP16.46■□□□□ 0.23
SLC1A3-208ENST00000506178 KIAA1107Q9UPP5 1409 aa16.45■□□□□ 0.22
SLC1A3-208ENST00000506178 ATP7AQ04656 1500 aa16.45■□□□□ 0.22
SLC1A3-208ENST00000506178 IQSEC2Q5JU85 1478 aa16.44■□□□□ 0.22
SLC1A3-208ENST00000506178 SOCS7O14512 581 aa16.44■□□□□ 0.22
SLC1A3-208ENST00000506178 PTPRKQ15262 1439 aa16.44■□□□□ 0.22
SLC1A3-208ENST00000506178 CLTCQ00610 1675 aaKnown RBP16.43■□□□□ 0.22
SLC1A3-208ENST00000506178 ZNF335Q9H4Z2 1342 aaPredicted RBP16.43■□□□□ 0.22
SLC1A3-208ENST00000506178 A2MP01023 1474 aa16.42■□□□□ 0.22
SLC1A3-208ENST00000506178 ZNF644Q9H582 1327 aaPredicted RBP16.42■□□□□ 0.22
SLC1A3-208ENST00000506178 CFDP1Q9UEE9 299 aaPredicted RBP16.41■□□□□ 0.22
SLC1A3-208ENST00000506178 SPATA31D1Q6ZQQ2 1576 aa16.4■□□□□ 0.22
SLC1A3-208ENST00000506178 MYO3AQ8NEV4 1616 aa16.4■□□□□ 0.22
SLC1A3-208ENST00000506178 TCOF1Q13428 1488 aaKnown RBP16.4■□□□□ 0.22
SLC1A3-208ENST00000506178 ZNF142P52746 1687 aaPredicted RBP16.4■□□□□ 0.22
SLC1A3-208ENST00000506178 CCNB3Q8WWL7 1395 aa16.39■□□□□ 0.21
SLC1A3-208ENST00000506178 MBD5Q9P267 1494 aa16.39■□□□□ 0.21
SLC1A3-208ENST00000506178 PLA2R1Q13018 1463 aa16.38■□□□□ 0.21
SLC1A3-208ENST00000506178 PLEKHH2Q8IVE3 1493 aa16.38■□□□□ 0.21
SLC1A3-208ENST00000506178 GGT6Q6P531 493 aa16.38■□□□□ 0.21
SLC1A3-208ENST00000506178 CEP170BQ9Y4F5 1589 aaPredicted RBP16.38■□□□□ 0.21
SLC1A3-208ENST00000506178 TIAM1Q13009 1591 aa16.36■□□□□ 0.21
SLC1A3-208ENST00000506178 PKD2Q13563 968 aa16.35■□□□□ 0.21
SLC1A3-208ENST00000506178 MTUS2Q5JR59 1369 aa16.33■□□□□ 0.2
SLC1A3-208ENST00000506178 ADGBQ8N7X0 1667 aa16.33■□□□□ 0.2
SLC1A3-208ENST00000506178 UBAP1LF5GYI3 381 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms