RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 FBLN2P98095 1184 aa10.6□□□□□ -0.71
PPARGC1A-204ENST00000506055 DISP1Q96F81 1524 aa10.6□□□□□ -0.71
PPARGC1A-204ENST00000506055 KIAA0586Q9BVV6 1533 aa10.6□□□□□ -0.71
PPARGC1A-204ENST00000506055 SENP3Q9H4L4 574 aaPredicted RBP10.6□□□□□ -0.71
PPARGC1A-204ENST00000506055 IFT140Q96RY7 1462 aa10.6□□□□□ -0.71
PPARGC1A-204ENST00000506055 C11orf95C9JLR9 678 aaPredicted RBP10.59□□□□□ -0.71
PPARGC1A-204ENST00000506055 ABCC5O15440 1437 aa10.59□□□□□ -0.71
PPARGC1A-204ENST00000506055 NUP153P49790 1475 aaKnown RBP10.59□□□□□ -0.71
PPARGC1A-204ENST00000506055 ZNF777Q9ULD5 760 aaPredicted RBP10.59□□□□□ -0.71
PPARGC1A-204ENST00000506055 NBPF8Q3BBV2 869 aa10.58□□□□□ -0.72
PPARGC1A-204ENST00000506055 CHMP7Q8WUX9 453 aaPredicted RBP10.58□□□□□ -0.72
PPARGC1A-204ENST00000506055 KIAA0556O60303 1618 aa10.58□□□□□ -0.72
PPARGC1A-204ENST00000506055 ROCK1Q13464 1354 aa10.58□□□□□ -0.72
PPARGC1A-204ENST00000506055 ANKRD30BQ9BXX2 1392 aa10.58□□□□□ -0.72
PPARGC1A-204ENST00000506055 CFDP1Q9UEE9 299 aaPredicted RBP10.57□□□□□ -0.72
PPARGC1A-204ENST00000506055 PRG4Q92954 1404 aaPredicted RBP10.56□□□□□ -0.72
PPARGC1A-204ENST00000506055 CCDC184Q52MB2 194 aa10.56□□□□□ -0.72
PPARGC1A-204ENST00000506055 GRIN2AQ12879 1464 aa10.56□□□□□ -0.72
PPARGC1A-204ENST00000506055 RAPGEF6Q8TEU7 1601 aa10.55□□□□□ -0.72
PPARGC1A-204ENST00000506055 RPRD2Q5VT52 1461 aaKnown RBP10.55□□□□□ -0.72
PPARGC1A-204ENST00000506055 DNMT1P26358 1616 aaKnown RBP10.55□□□□□ -0.72
PPARGC1A-204ENST00000506055 IRX6P78412 446 aaPredicted RBP10.54□□□□□ -0.72
PPARGC1A-204ENST00000506055 FAM9BQ8IZU0 186 aa10.54□□□□□ -0.72
PPARGC1A-204ENST00000506055 CNTLNQ9NXG0 1405 aa10.54□□□□□ -0.72
PPARGC1A-204ENST00000506055 CCDC7Q96M83 1385 aa10.53□□□□□ -0.72
PPARGC1A-204ENST00000506055 PLB1Q6P1J6 1458 aa10.53□□□□□ -0.72
PPARGC1A-204ENST00000506055 ZNF326Q5BKZ1 582 aaKnown RBP10.53□□□□□ -0.72
PPARGC1A-204ENST00000506055 PRKRIP1Q9H875 184 aaPredicted RBP10.53□□□□□ -0.72
PPARGC1A-204ENST00000506055 EIF4G3O43432 1585 aaKnown RBP10.53□□□□□ -0.72
PPARGC1A-204ENST00000506055 CNGB1Q14028 1251 aaPredicted RBP10.53□□□□□ -0.72
PPARGC1A-204ENST00000506055 NCOA1Q15788 1441 aa10.52□□□□□ -0.73
PPARGC1A-204ENST00000506055 ERCC6Q03468 1493 aa10.52□□□□□ -0.73
PPARGC1A-204ENST00000506055 TROQ12816 1431 aaPredicted RBP10.52□□□□□ -0.73
PPARGC1A-204ENST00000506055 MRS2Q9HD23 443 aa10.52□□□□□ -0.73
PPARGC1A-204ENST00000506055 KIF7Q2M1P5 1343 aa10.51□□□□□ -0.73
PPARGC1A-204ENST00000506055 JPH4Q96JJ6 628 aa10.51□□□□□ -0.73
PPARGC1A-204ENST00000506055 CAMSAP2Q08AD1 1489 aa10.51□□□□□ -0.73
PPARGC1A-204ENST00000506055 POLR3GLQ9BT43 218 aa10.51□□□□□ -0.73
PPARGC1A-204ENST00000506055 TEX14Q8IWB6 1497 aa10.5□□□□□ -0.73
PPARGC1A-204ENST00000506055 PKD2Q13563 968 aa10.5□□□□□ -0.73
PPARGC1A-204ENST00000506055 RBM19Q9Y4C8 960 aaKnown RBP10.5□□□□□ -0.73
PPARGC1A-204ENST00000506055 GPATCH8Q9UKJ3 1502 aaKnown RBP10.49□□□□□ -0.73
PPARGC1A-204ENST00000506055 PZPP20742 1482 aa10.48□□□□□ -0.73
PPARGC1A-204ENST00000506055 CEP170Q5SW79 1584 aa10.48□□□□□ -0.73
PPARGC1A-204ENST00000506055 PLEKHD1A6NEE1 506 aa10.48□□□□□ -0.73
PPARGC1A-204ENST00000506055 CARMIL2Q6F5E8 1435 aa10.48□□□□□ -0.73
PPARGC1A-204ENST00000506055 SPATA31E1Q6ZUB1 1445 aa10.48□□□□□ -0.73
PPARGC1A-204ENST00000506055 KIF14Q15058 1648 aa10.48□□□□□ -0.73
PPARGC1A-204ENST00000506055 MAGI1Q96QZ7 1491 aaPredicted RBP10.48□□□□□ -0.73
PPARGC1A-204ENST00000506055 SYNJ2O15056 1496 aa10.47□□□□□ -0.73
PPARGC1A-204ENST00000506055 ANKRD30AQ9BXX3 1397 aa10.47□□□□□ -0.73
PPARGC1A-204ENST00000506055 KIAA1107Q9UPP5 1409 aa10.46□□□□□ -0.74
PPARGC1A-204ENST00000506055 ITSN2Q9NZM3 1697 aa10.45□□□□□ -0.74
PPARGC1A-204ENST00000506055 NUP155O75694 1391 aa10.44□□□□□ -0.74
PPARGC1A-204ENST00000506055 ANKRD50Q9ULJ7 1429 aa10.44□□□□□ -0.74
PPARGC1A-204ENST00000506055 ANP32EQ9BTT0 268 aa10.44□□□□□ -0.74
PPARGC1A-204ENST00000506055 TSPY4P0CV99 314 aa10.44□□□□□ -0.74
PPARGC1A-204ENST00000506055 TSPY10P0CW01 314 aa10.44□□□□□ -0.74
PPARGC1A-204ENST00000506055 USP47Q96K76 1375 aa10.44□□□□□ -0.74
PPARGC1A-204ENST00000506055 HNRNPMP52272 730 aaKnown RBP eCLIP10.43□□□□□ -0.74
PPARGC1A-204ENST00000506055 KDM2AQ9Y2K7 1162 aa10.43□□□□□ -0.74
PPARGC1A-204ENST00000506055 ADGBQ8N7X0 1667 aa10.43□□□□□ -0.74
PPARGC1A-204ENST00000506055 ADGRL2O95490 1459 aa10.43□□□□□ -0.74
PPARGC1A-204ENST00000506055 ZBED9Q6R2W3 1325 aa10.42□□□□□ -0.74
PPARGC1A-204ENST00000506055 NUP160Q12769 1436 aa10.41□□□□□ -0.74
PPARGC1A-204ENST00000506055 ATP10BO94823 1461 aa10.41□□□□□ -0.74
PPARGC1A-204ENST00000506055 ADCY10Q96PN6 1610 aa10.41□□□□□ -0.74
PPARGC1A-204ENST00000506055 SENP3-EIF4A1A0A087X0R7 540 aa10.4□□□□□ -0.74
PPARGC1A-204ENST00000506055 C9orf84Q5VXU9 1444 aa10.4□□□□□ -0.74
PPARGC1A-204ENST00000506055 CARD11Q9BXL7 1154 aa10.4□□□□□ -0.74
PPARGC1A-204ENST00000506055 MBD5Q9P267 1494 aa10.4□□□□□ -0.74
PPARGC1A-204ENST00000506055 PPP4R2Q9NY27 417 aa10.4□□□□□ -0.74
PPARGC1A-204ENST00000506055 CROCC2H7BZ55 1655 aa10.4□□□□□ -0.75
PPARGC1A-204ENST00000506055 DCAF11Q8TEB1 546 aa10.39□□□□□ -0.75
PPARGC1A-204ENST00000506055 DHX29Q7Z478 1369 aaKnown RBP10.39□□□□□ -0.75
PPARGC1A-204ENST00000506055 ERICH6BQ5W0A0 696 aa10.38□□□□□ -0.75
PPARGC1A-204ENST00000506055 POLR1AO95602 1720 aaPredicted RBP10.38□□□□□ -0.75
PPARGC1A-204ENST00000506055 BCORL1Q5H9F3 1711 aa10.38□□□□□ -0.75
PPARGC1A-204ENST00000506055 CDC42BPAQ5VT25 1732 aa10.38□□□□□ -0.75
PPARGC1A-204ENST00000506055 B4GALNT3Q6L9W6 998 aa10.37□□□□□ -0.75
PPARGC1A-204ENST00000506055 ABCC10Q5T3U5 1492 aa10.37□□□□□ -0.75
PPARGC1A-204ENST00000506055 KIF15Q9NS87 1388 aa10.37□□□□□ -0.75
PPARGC1A-204ENST00000506055 ST20-MTHFSA0A0A6YYL1 179 aa10.37□□□□□ -0.75
PPARGC1A-204ENST00000506055 ABCA8O94911 1581 aa10.37□□□□□ -0.75
PPARGC1A-204ENST00000506055 TMC1Q8TDI8 760 aa10.36□□□□□ -0.75
PPARGC1A-204ENST00000506055 KDM5CP41229 1560 aa10.35□□□□□ -0.75
PPARGC1A-204ENST00000506055 ARID4BQ4LE39 1312 aaPredicted RBP10.35□□□□□ -0.75
PPARGC1A-204ENST00000506055 PTPRGP23470 1445 aa10.35□□□□□ -0.75
PPARGC1A-204ENST00000506055 SHANK2Q9UPX8 1470 aa10.35□□□□□ -0.75
PPARGC1A-204ENST00000506055 RGL3Q3MIN7 710 aa10.34□□□□□ -0.75
PPARGC1A-204ENST00000506055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.34□□□□□ -0.757e-7■■□□□ 11.7
PPARGC1A-204ENST00000506055 UHRF1BP1Q6BDS2 1440 aa10.34□□□□□ -0.75
PPARGC1A-204ENST00000506055 RALGAPBQ86X10 1494 aa10.33□□□□□ -0.76
PPARGC1A-204ENST00000506055 MSH5O43196 834 aa10.33□□□□□ -0.76
PPARGC1A-204ENST00000506055 PNISRQ8TF01 805 aaKnown RBP10.33□□□□□ -0.76
PPARGC1A-204ENST00000506055 ROCK2O75116 1388 aaKnown RBP10.32□□□□□ -0.76
PPARGC1A-204ENST00000506055 NUDCQ9Y266 331 aa10.31□□□□□ -0.76
PPARGC1A-204ENST00000506055 SMG6Q86US8 1419 aaKnown RBP10.3□□□□□ -0.76
PPARGC1A-204ENST00000506055 ARHGEF12Q9NZN5 1544 aa10.3□□□□□ -0.76
PPARGC1A-204ENST00000506055 RSPH4AQ5TD94 716 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms