RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 FER1L4A9Z1Z3 1794 aa17.68■□□□□ 0.42
SGCA-205ENST00000505964 DENND4BO75064 1496 aaPredicted RBP17.68■□□□□ 0.42
SGCA-205ENST00000505964 CCDC18Q5T9S5 1454 aa17.67■□□□□ 0.42
SGCA-205ENST00000505964 CFAP74Q9C0B2 1584 aa17.66■□□□□ 0.42
SGCA-205ENST00000505964 TTC37Q6PGP7 1564 aa17.66■□□□□ 0.42
SGCA-205ENST00000505964 AKNAQ7Z591 1439 aa17.65■□□□□ 0.42
SGCA-205ENST00000505964 FANCAO15360 1455 aa17.65■□□□□ 0.42
SGCA-205ENST00000505964 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.64■□□□□ 0.41
SGCA-205ENST00000505964 YEATS2Q9ULM3 1422 aa17.64■□□□□ 0.41
SGCA-205ENST00000505964 MLECQ14165 292 aa17.63■□□□□ 0.41
SGCA-205ENST00000505964 ZFYVE16Q7Z3T8 1539 aa17.62■□□□□ 0.41
SGCA-205ENST00000505964 ZMYM4Q5VZL5 1548 aa17.62■□□□□ 0.41
SGCA-205ENST00000505964 POGZQ7Z3K3 1410 aa17.6■□□□□ 0.41
SGCA-205ENST00000505964 PLEKHD1A6NEE1 506 aa17.59■□□□□ 0.41
SGCA-205ENST00000505964 CERKQ8TCT0 537 aa17.59■□□□□ 0.41
SGCA-205ENST00000505964 ATP1B4Q9UN42 357 aaPredicted RBP17.59■□□□□ 0.41
SGCA-205ENST00000505964 LRRC9Q6ZRR7 1453 aa17.57■□□□□ 0.4
SGCA-205ENST00000505964 PREX1Q8TCU6 1659 aa17.56■□□□□ 0.4
SGCA-205ENST00000505964 CDK13Q14004 1512 aaKnown RBP17.56■□□□□ 0.4
SGCA-205ENST00000505964 EHBP1L1Q8N3D4 1523 aa17.54■□□□□ 0.4
SGCA-205ENST00000505964 STRCQ7RTU9 1775 aa17.53■□□□□ 0.4
SGCA-205ENST00000505964 MAGI2Q86UL8 1455 aa17.51■□□□□ 0.39
SGCA-205ENST00000505964 KANK4Q5T7N3 995 aaPredicted RBP17.51■□□□□ 0.39
SGCA-205ENST00000505964 SCAPERQ9BY12 1400 aa17.51■□□□□ 0.39
SGCA-205ENST00000505964 MYO5CQ9NQX4 1742 aa17.51■□□□□ 0.39
SGCA-205ENST00000505964 SUPT6HQ7KZ85 1726 aaKnown RBP17.5■□□□□ 0.39
SGCA-205ENST00000505964 CDK11AQ9UQ88 783 aaPredicted RBP17.5■□□□□ 0.39
SGCA-205ENST00000505964 ARHGEF12Q9NZN5 1544 aa17.5■□□□□ 0.39
SGCA-205ENST00000505964 CEBPAP49715 358 aaPredicted RBP17.49■□□□□ 0.39
SGCA-205ENST00000505964 ILDR2Q71H61 639 aa17.49■□□□□ 0.39
SGCA-205ENST00000505964 MTUS2Q5JR59 1369 aa17.49■□□□□ 0.39
SGCA-205ENST00000505964 PPARGC1BQ86YN6 1023 aaKnown RBP17.48■□□□□ 0.39
SGCA-205ENST00000505964 DISP3Q9P2K9 1392 aa17.48■□□□□ 0.39
SGCA-205ENST00000505964 SETD1BQ9UPS6 1966 aaKnown RBP17.48■□□□□ 0.39
SGCA-205ENST00000505964 ATP10AO60312 1499 aa17.46■□□□□ 0.39
SGCA-205ENST00000505964 PLCH2O75038 1416 aa17.46■□□□□ 0.39
SGCA-205ENST00000505964 C9orf84Q5VXU9 1444 aa17.46■□□□□ 0.39
SGCA-205ENST00000505964 KIF14Q15058 1648 aa17.45■□□□□ 0.38
SGCA-205ENST00000505964 TROQ12816 1431 aaPredicted RBP17.45■□□□□ 0.38
SGCA-205ENST00000505964 TRIM26Q12899 539 aaPredicted RBP17.41■□□□□ 0.38
SGCA-205ENST00000505964 NCOA2Q15596 1464 aa17.41■□□□□ 0.38
SGCA-205ENST00000505964 C3P01024 1663 aa17.41■□□□□ 0.38
SGCA-205ENST00000505964 UHRF1BP1Q6BDS2 1440 aa17.39■□□□□ 0.38
SGCA-205ENST00000505964 SPATA31D1Q6ZQQ2 1576 aa17.39■□□□□ 0.37
SGCA-205ENST00000505964 DIP2CQ9Y2E4 1556 aa17.38■□□□□ 0.37
SGCA-205ENST00000505964 EFCAB2Q5VUJ9 269 aa17.38■□□□□ 0.37
SGCA-205ENST00000505964 MYT1LQ9UL68 1186 aa17.38■□□□□ 0.37
SGCA-205ENST00000505964 ARHGAP5Q13017 1502 aa17.37■□□□□ 0.37
SGCA-205ENST00000505964 ABCA6Q8N139 1617 aa17.37■□□□□ 0.37
SGCA-205ENST00000505964 SOCS7O14512 581 aa17.37■□□□□ 0.37
SGCA-205ENST00000505964 CDC42BPBQ9Y5S2 1711 aa17.37■□□□□ 0.37
SGCA-205ENST00000505964 ZNF518AQ6AHZ1 1483 aa17.37■□□□□ 0.37
SGCA-205ENST00000505964 KDM5CP41229 1560 aa17.36■□□□□ 0.37
SGCA-205ENST00000505964 AFAP1Q8N556 730 aa17.36■□□□□ 0.37
SGCA-205ENST00000505964 ITSN2Q9NZM3 1697 aa17.36■□□□□ 0.37
SGCA-205ENST00000505964 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
SGCA-205ENST00000505964 RRBP1Q9P2E9 1410 aaKnown RBP17.35■□□□□ 0.37
SGCA-205ENST00000505964 MYOM3Q5VTT5 1437 aa17.33■□□□□ 0.36
SGCA-205ENST00000505964 CDC42BPAQ5VT25 1732 aa17.32■□□□□ 0.36
SGCA-205ENST00000505964 LTBP4Q8N2S1 1624 aa17.3■□□□□ 0.36
SGCA-205ENST00000505964 REREQ9P2R6 1566 aa17.3■□□□□ 0.36
SGCA-205ENST00000505964 PTPRTO14522 1441 aa17.29■□□□□ 0.36
SGCA-205ENST00000505964 FGD6Q6ZV73 1430 aa17.29■□□□□ 0.36
SGCA-205ENST00000505964 MIA2Q96PC5 1412 aa17.29■□□□□ 0.36
SGCA-205ENST00000505964 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
SGCA-205ENST00000505964 PREX2Q70Z35 1606 aa17.28■□□□□ 0.36
SGCA-205ENST00000505964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.28■□□□□ 0.36
SGCA-205ENST00000505964 KIDINS220Q9ULH0 1771 aa17.27■□□□□ 0.35
SGCA-205ENST00000505964 GPATCH8Q9UKJ3 1502 aaKnown RBP17.26■□□□□ 0.35
SGCA-205ENST00000505964 PTPN23Q9H3S7 1636 aa17.26■□□□□ 0.35
SGCA-205ENST00000505964 ESF1Q9H501 851 aaKnown RBP17.26■□□□□ 0.35
SGCA-205ENST00000505964 TRAPPC8Q9Y2L5 1435 aa17.26■□□□□ 0.35
SGCA-205ENST00000505964 ABCC1P33527 1531 aa17.26■□□□□ 0.35
SGCA-205ENST00000505964 TCOF1Q13428 1488 aaKnown RBP17.24■□□□□ 0.35
SGCA-205ENST00000505964 MLH3Q9UHC1 1453 aa17.24■□□□□ 0.35
SGCA-205ENST00000505964 NCOA1Q15788 1441 aa17.23■□□□□ 0.35
SGCA-205ENST00000505964 AGLP35573 1532 aa17.23■□□□□ 0.35
SGCA-205ENST00000505964 CAMSAP1Q5T5Y3 1602 aa17.23■□□□□ 0.35
SGCA-205ENST00000505964 PCGF6Q9BYE7 350 aa17.23■□□□□ 0.35
SGCA-205ENST00000505964 MROH2AA6NES4 1674 aa17.2■□□□□ 0.34
SGCA-205ENST00000505964 CLTCQ00610 1675 aaKnown RBP17.19■□□□□ 0.34
SGCA-205ENST00000505964 IQSEC2Q5JU85 1478 aa17.18■□□□□ 0.34
SGCA-205ENST00000505964 CFDP1Q9UEE9 299 aaPredicted RBP17.17■□□□□ 0.34
SGCA-205ENST00000505964 NCKAP5LQ9HCH0 1330 aa17.17■□□□□ 0.34
SGCA-205ENST00000505964 SAMD9LQ8IVG5 1584 aa17.16■□□□□ 0.34
SGCA-205ENST00000505964 CNTLNQ9NXG0 1405 aa17.16■□□□□ 0.34
SGCA-205ENST00000505964 ZNF335Q9H4Z2 1342 aaPredicted RBP17.16■□□□□ 0.34
SGCA-205ENST00000505964 MYO3AQ8NEV4 1616 aa17.15■□□□□ 0.34
SGCA-205ENST00000505964 CAMSAP2Q08AD1 1489 aa17.15■□□□□ 0.34
SGCA-205ENST00000505964 ZNF142P52746 1687 aaPredicted RBP17.14■□□□□ 0.33
SGCA-205ENST00000505964 FAM50AQ14320 339 aaKnown RBP17.14■□□□□ 0.33
SGCA-205ENST00000505964 DNMT1P26358 1616 aaKnown RBP17.14■□□□□ 0.33
SGCA-205ENST00000505964 SYCP2Q9BX26 1530 aa17.13■□□□□ 0.33
SGCA-205ENST00000505964 UBAP1LF5GYI3 381 aa17.13■□□□□ 0.33
SGCA-205ENST00000505964 ZNF777Q9ULD5 760 aaPredicted RBP17.13■□□□□ 0.33
SGCA-205ENST00000505964 ZMYM3Q14202 1370 aa17.12■□□□□ 0.33
SGCA-205ENST00000505964 NPATQ14207 1427 aa17.12■□□□□ 0.33
SGCA-205ENST00000505964 PLEKHH2Q8IVE3 1493 aa17.12■□□□□ 0.33
SGCA-205ENST00000505964 CROCC2H7BZ55 1655 aa17.11■□□□□ 0.33
SGCA-205ENST00000505964 ARHGEF5Q12774 1597 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms