RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 ABCC5O15440 1437 aa27.81■■■□□ 2.04
SDHA-206ENST00000505555 TROQ12816 1431 aaPredicted RBP27.81■■■□□ 2.04
SDHA-206ENST00000505555 MPHOSPH9Q99550 1183 aa27.8■■■□□ 2.04
SDHA-206ENST00000505555 KCNH8Q96L42 1107 aa27.79■■■□□ 2.04
SDHA-206ENST00000505555 FOXD1Q16676 465 aa27.77■■■□□ 2.04
SDHA-206ENST00000505555 CFDP1Q9UEE9 299 aaPredicted RBP27.76■■■□□ 2.03
SDHA-206ENST00000505555 DNMT1P26358 1616 aaKnown RBP27.75■■■□□ 2.03
SDHA-206ENST00000505555 ROCK1Q13464 1354 aa27.74■■■□□ 2.03
SDHA-206ENST00000505555 ZNF777Q9ULD5 760 aaPredicted RBP27.73■■■□□ 2.03
SDHA-206ENST00000505555 KDM5BQ9UGL1 1544 aa27.73■■■□□ 2.03
SDHA-206ENST00000505555 KIF14Q15058 1648 aa27.72■■■□□ 2.03
SDHA-206ENST00000505555 GPATCH8Q9UKJ3 1502 aaKnown RBP27.7■■■□□ 2.03
SDHA-206ENST00000505555 CAMSAP2Q08AD1 1489 aa27.68■■■□□ 2.02
SDHA-206ENST00000505555 PLEKHD1A6NEE1 506 aa27.65■■■□□ 2.02
SDHA-206ENST00000505555 ABCA8O94911 1581 aa27.64■■■□□ 2.01
SDHA-206ENST00000505555 ATP10BO94823 1461 aa27.63■■■□□ 2.01
SDHA-206ENST00000505555 ADCY10Q96PN6 1610 aa27.62■■■□□ 2.01
SDHA-206ENST00000505555 ITSN2Q9NZM3 1697 aa27.6■■■□□ 2.01
SDHA-206ENST00000505555 L3MBTL2Q969R5 705 aa27.6■■■□□ 2.01
SDHA-206ENST00000505555 SLC4A1APQ9BWU0 796 aaKnown RBP27.6■■■□□ 2.01
SDHA-206ENST00000505555 NCOA1Q15788 1441 aa27.57■■■□□ 2
SDHA-206ENST00000505555 ANKRD30BQ9BXX2 1392 aa27.57■■■□□ 2
SDHA-206ENST00000505555 PTPRGP23470 1445 aa27.55■■■□□ 2
SDHA-206ENST00000505555 ANP32CO43423 234 aa27.52■■■□□ 2
SDHA-206ENST00000505555 HSPA5P11021 654 aaKnown RBP27.52■■■□□ 2
SDHA-206ENST00000505555 ABCC10Q5T3U5 1492 aa27.51■■□□□ 1.99
SDHA-206ENST00000505555 RPRD2Q5VT52 1461 aaKnown RBP27.48■■□□□ 1.99
SDHA-206ENST00000505555 CDC42BPAQ5VT25 1732 aa27.48■■□□□ 1.99
SDHA-206ENST00000505555 PZPP20742 1482 aa27.47■■□□□ 1.99
SDHA-206ENST00000505555 CHD1O14646 1710 aa27.46■■□□□ 1.99
SDHA-206ENST00000505555 ADGBQ8N7X0 1667 aa27.46■■□□□ 1.99
SDHA-206ENST00000505555 ADGRL2O95490 1459 aa27.46■■□□□ 1.99
SDHA-206ENST00000505555 ANKRD30AQ9BXX3 1397 aa27.46■■□□□ 1.99
SDHA-206ENST00000505555 CROCC2H7BZ55 1655 aa27.45■■□□□ 1.98
SDHA-206ENST00000505555 EIF4G2P78344 907 aaKnown RBP eCLIP27.44■■□□□ 1.98
SDHA-206ENST00000505555 NBPF8Q3BBV2 869 aa27.44■■□□□ 1.98
SDHA-206ENST00000505555 WASHC2AQ641Q2 1341 aa27.42■■□□□ 1.98
SDHA-206ENST00000505555 HNRNPMP52272 730 aaKnown RBP eCLIP27.41■■□□□ 1.98
SDHA-206ENST00000505555 CCER2I3L3R5 266 aa27.41■■□□□ 1.98
SDHA-206ENST00000505555 TEX14Q8IWB6 1497 aa27.39■■□□□ 1.98
SDHA-206ENST00000505555 ANKRD50Q9ULJ7 1429 aa27.39■■□□□ 1.98
SDHA-206ENST00000505555 PKD2Q13563 968 aa27.38■■□□□ 1.97
SDHA-206ENST00000505555 C9orf84Q5VXU9 1444 aa27.38■■□□□ 1.97
SDHA-206ENST00000505555 TSPY4P0CV99 314 aa27.37■■□□□ 1.97
SDHA-206ENST00000505555 TSPY10P0CW01 314 aa27.37■■□□□ 1.97
SDHA-206ENST00000505555 KIAA1107Q9UPP5 1409 aa27.33■■□□□ 1.97
SDHA-206ENST00000505555 ERCC6L2Q5T890 1561 aa27.32■■□□□ 1.96
SDHA-206ENST00000505555 C11orf95C9JLR9 678 aaPredicted RBP27.32■■□□□ 1.96
SDHA-206ENST00000505555 SHANK2Q9UPX8 1470 aa27.31■■□□□ 1.96
SDHA-206ENST00000505555 SUPT16HQ9Y5B9 1047 aaKnown RBP27.31■■□□□ 1.96
SDHA-206ENST00000505555 NUP155O75694 1391 aa27.3■■□□□ 1.96
SDHA-206ENST00000505555 SHROOM2Q13796 1616 aa27.29■■□□□ 1.96
SDHA-206ENST00000505555 MBD5Q9P267 1494 aa27.28■■□□□ 1.96
SDHA-206ENST00000505555 KIF15Q9NS87 1388 aa27.26■■□□□ 1.95
SDHA-206ENST00000505555 SAMD9LQ8IVG5 1584 aa27.24■■□□□ 1.95
SDHA-206ENST00000505555 CDC42BPBQ9Y5S2 1711 aa27.24■■□□□ 1.95
SDHA-206ENST00000505555 ZNF326Q5BKZ1 582 aaKnown RBP27.22■■□□□ 1.95
SDHA-206ENST00000505555 ARHGEF5Q12774 1597 aa27.22■■□□□ 1.95
SDHA-206ENST00000505555 CCDC7Q96M83 1385 aa27.21■■□□□ 1.95
SDHA-206ENST00000505555 PREX2Q70Z35 1606 aa27.2■■□□□ 1.95
SDHA-206ENST00000505555 SPATA31E1Q6ZUB1 1445 aa27.19■■□□□ 1.94
SDHA-206ENST00000505555 CCDC141Q6ZP82 1450 aa27.19■■□□□ 1.94
SDHA-206ENST00000505555 TTC37Q6PGP7 1564 aa27.18■■□□□ 1.94
SDHA-206ENST00000505555 ABCC2Q92887 1545 aa27.17■■□□□ 1.94
SDHA-206ENST00000505555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.16■■□□□ 1.942e-7■■□□□ 12
SDHA-206ENST00000505555 CNTLNQ9NXG0 1405 aa27.16■■□□□ 1.94
SDHA-206ENST00000505555 ARHGAP5Q13017 1502 aa27.15■■□□□ 1.94
SDHA-206ENST00000505555 RSPH4AQ5TD94 716 aa27.14■■□□□ 1.94
SDHA-206ENST00000505555 SYCP2Q9BX26 1530 aa27.13■■□□□ 1.93
SDHA-206ENST00000505555 KIF7Q2M1P5 1343 aa27.13■■□□□ 1.93
SDHA-206ENST00000505555 KDM5DQ9BY66 1539 aa27.11■■□□□ 1.93
SDHA-206ENST00000505555 CCDC184Q52MB2 194 aa27.06■■□□□ 1.92
SDHA-206ENST00000505555 KDM2AQ9Y2K7 1162 aa27.06■■□□□ 1.92
SDHA-206ENST00000505555 CLASP1Q7Z460 1538 aa27.06■■□□□ 1.92
SDHA-206ENST00000505555 USP47Q96K76 1375 aa27.05■■□□□ 1.92
SDHA-206ENST00000505555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.04■■□□□ 1.921e-11■■■■□ 21.4
SDHA-206ENST00000505555 PRKRIP1Q9H875 184 aaPredicted RBP27.04■■□□□ 1.92
SDHA-206ENST00000505555 FAM135AQ9P2D6 1515 aa27.03■■□□□ 1.92
SDHA-206ENST00000505555 HNRNPUQ00839 825 aaKnown RBP eCLIP27.02■■□□□ 1.92
SDHA-206ENST00000505555 FKBP8Q14318 412 aa27.01■■□□□ 1.91
SDHA-206ENST00000505555 MYO5CQ9NQX4 1742 aa27.01■■□□□ 1.91
SDHA-206ENST00000505555 DCAF11Q8TEB1 546 aa27.01■■□□□ 1.91
SDHA-206ENST00000505555 POLR3GLQ9BT43 218 aa27■■□□□ 1.91
SDHA-206ENST00000505555 ZCCHC11Q5TAX3 1644 aaKnown RBP27■■□□□ 1.91
SDHA-206ENST00000505555 ARHGEF12Q9NZN5 1544 aa27■■□□□ 1.91
SDHA-206ENST00000505555 UHRF1BP1Q6BDS2 1440 aa26.99■■□□□ 1.91
SDHA-206ENST00000505555 BCANQ96GW7 911 aa26.98■■□□□ 1.91
SDHA-206ENST00000505555 MAST1Q9Y2H9 1570 aa26.97■■□□□ 1.91
SDHA-206ENST00000505555 PLCH2O75038 1416 aa26.96■■□□□ 1.91
SDHA-206ENST00000505555 CARD11Q9BXL7 1154 aa26.96■■□□□ 1.91
SDHA-206ENST00000505555 BCORL1Q5H9F3 1711 aa26.95■■□□□ 1.91
SDHA-206ENST00000505555 UHRF1BP1LA0JNW5 1464 aa26.95■■□□□ 1.9
SDHA-206ENST00000505555 PLEKHH2Q8IVE3 1493 aa26.95■■□□□ 1.9
SDHA-206ENST00000505555 EFCAB2Q5VUJ9 269 aa26.94■■□□□ 1.9
SDHA-206ENST00000505555 POLR1AO95602 1720 aaPredicted RBP26.94■■□□□ 1.9
SDHA-206ENST00000505555 KDM5CP41229 1560 aa26.94■■□□□ 1.9
SDHA-206ENST00000505555 RALGAPBQ86X10 1494 aa26.93■■□□□ 1.9
SDHA-206ENST00000505555 CNGB1Q14028 1251 aaPredicted RBP26.92■■□□□ 1.9
SDHA-206ENST00000505555 MRS2Q9HD23 443 aa26.91■■□□□ 1.9
SDHA-206ENST00000505555 RGL3Q3MIN7 710 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms