RNA–Protein interactions for RNA: ENST00000505453.1

PDE4D-212, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-212ENST00000505453 SSUH2Q9Y2M2 353 aa15.66■□□□□ 0.1
PDE4D-212ENST00000505453 HECW1Q76N89 1606 aa15.66■□□□□ 0.1
PDE4D-212ENST00000505453 NUP153P49790 1475 aaKnown RBP15.65■□□□□ 0.1
PDE4D-212ENST00000505453 CCNB3Q8WWL7 1395 aa15.65■□□□□ 0.1
PDE4D-212ENST00000505453 CLASP1Q7Z460 1538 aa15.64■□□□□ 0.09
PDE4D-212ENST00000505453 CDK13Q14004 1512 aaKnown RBP15.63■□□□□ 0.09
PDE4D-212ENST00000505453 SHROOM2Q13796 1616 aa15.62■□□□□ 0.09
PDE4D-212ENST00000505453 MAGI3Q5TCQ9 1506 aa15.61■□□□□ 0.09
PDE4D-212ENST00000505453 RAPGEF6Q8TEU7 1601 aa15.61■□□□□ 0.09
PDE4D-212ENST00000505453 PITPNM1O00562 1244 aa15.6■□□□□ 0.09
PDE4D-212ENST00000505453 LRRIQ1Q96JM4 1722 aa15.6■□□□□ 0.09
PDE4D-212ENST00000505453 ERCC6L2Q5T890 1561 aa15.59■□□□□ 0.09
PDE4D-212ENST00000505453 CDK11AQ9UQ88 783 aaPredicted RBP15.59■□□□□ 0.09
PDE4D-212ENST00000505453 NCOA2Q15596 1464 aa15.58■□□□□ 0.09
PDE4D-212ENST00000505453 EHBP1L1Q8N3D4 1523 aa15.58■□□□□ 0.08
PDE4D-212ENST00000505453 ABCA8O94911 1581 aa15.58■□□□□ 0.08
PDE4D-212ENST00000505453 FAM50AQ14320 339 aaKnown RBP15.57■□□□□ 0.08
PDE4D-212ENST00000505453 ITGAEP38570 1179 aa15.56■□□□□ 0.08
PDE4D-212ENST00000505453 SPDYE4A6NLX3 237 aa15.55■□□□□ 0.08
PDE4D-212ENST00000505453 UACAQ9BZF9 1416 aa15.55■□□□□ 0.08
PDE4D-212ENST00000505453 ATP10BO94823 1461 aa15.55■□□□□ 0.08
PDE4D-212ENST00000505453 ARHGEF11O15085 1522 aa15.53■□□□□ 0.08
PDE4D-212ENST00000505453 PLEKHD1A6NEE1 506 aa15.52■□□□□ 0.08
PDE4D-212ENST00000505453 SPDYE1Q8NFV5 336 aaPredicted RBP15.52■□□□□ 0.08
PDE4D-212ENST00000505453 MYOM3Q5VTT5 1437 aa15.52■□□□□ 0.08
PDE4D-212ENST00000505453 FGD6Q6ZV73 1430 aa15.52■□□□□ 0.08
PDE4D-212ENST00000505453 CCER1Q8TC90 406 aaPredicted RBP15.51■□□□□ 0.07
PDE4D-212ENST00000505453 TROQ12816 1431 aaPredicted RBP15.51■□□□□ 0.07
PDE4D-212ENST00000505453 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.51■□□□□ 0.07
PDE4D-212ENST00000505453 SUPT6HQ7KZ85 1726 aaKnown RBP15.48■□□□□ 0.07
PDE4D-212ENST00000505453 ZEB1P37275 1124 aaPredicted RBP15.48■□□□□ 0.07
PDE4D-212ENST00000505453 CLEC11AQ9Y240 323 aa15.46■□□□□ 0.07
PDE4D-212ENST00000505453 ABCC2Q92887 1545 aa15.44■□□□□ 0.06
PDE4D-212ENST00000505453 MIA2Q96PC5 1412 aa15.43■□□□□ 0.06
PDE4D-212ENST00000505453 PIP4P2Q8N4L2 257 aa15.43■□□□□ 0.06
PDE4D-212ENST00000505453 UHRF1BP1LA0JNW5 1464 aa15.43■□□□□ 0.06
PDE4D-212ENST00000505453 FKBP8Q14318 412 aa15.43■□□□□ 0.06
PDE4D-212ENST00000505453 TCOF1Q13428 1488 aaKnown RBP15.41■□□□□ 0.06
PDE4D-212ENST00000505453 PTPRKQ15262 1439 aa15.41■□□□□ 0.06
PDE4D-212ENST00000505453 ZNF644Q9H582 1327 aaPredicted RBP15.39■□□□□ 0.05
PDE4D-212ENST00000505453 FXR2P51116 673 aaKnown RBP eCLIP15.39■□□□□ 0.05
PDE4D-212ENST00000505453 CFDP1Q9UEE9 299 aaPredicted RBP15.39■□□□□ 0.05
PDE4D-212ENST00000505453 GPATCH8Q9UKJ3 1502 aaKnown RBP15.39■□□□□ 0.05
PDE4D-212ENST00000505453 SETD5Q9C0A6 1442 aa15.38■□□□□ 0.05
PDE4D-212ENST00000505453 ABCC10Q5T3U5 1492 aa15.38■□□□□ 0.05
PDE4D-212ENST00000505453 PTPN23Q9H3S7 1636 aa15.37■□□□□ 0.05
PDE4D-212ENST00000505453 KDM5BQ9UGL1 1544 aa15.37■□□□□ 0.05
PDE4D-212ENST00000505453 KIF14Q15058 1648 aa15.36■□□□□ 0.05
PDE4D-212ENST00000505453 RAB3GAP2Q9H2M9 1393 aa15.36■□□□□ 0.05
PDE4D-212ENST00000505453 KCNH8Q96L42 1107 aa15.34■□□□□ 0.05
PDE4D-212ENST00000505453 ZNF777Q9ULD5 760 aaPredicted RBP15.34■□□□□ 0.05
PDE4D-212ENST00000505453 ADCY10Q96PN6 1610 aa15.34■□□□□ 0.05
PDE4D-212ENST00000505453 PROM2Q8N271 834 aa15.34■□□□□ 0.05
PDE4D-212ENST00000505453 CHIC2Q9UKJ5 165 aa15.34■□□□□ 0.05
PDE4D-212ENST00000505453 DHX57Q6P158 1386 aaKnown RBP15.33■□□□□ 0.04
PDE4D-212ENST00000505453 ABCC5O15440 1437 aa15.3■□□□□ 0.04
PDE4D-212ENST00000505453 RRP7BPQ9NSQ0 103 aa15.29■□□□□ 0.04
PDE4D-212ENST00000505453 DAPK1P53355 1430 aa15.28■□□□□ 0.04
PDE4D-212ENST00000505453 ZCCHC11Q5TAX3 1644 aaKnown RBP15.28■□□□□ 0.04
PDE4D-212ENST00000505453 CAMSAP2Q08AD1 1489 aa15.28■□□□□ 0.04
PDE4D-212ENST00000505453 HFM1A2PYH4 1435 aa15.27■□□□□ 0.04
PDE4D-212ENST00000505453 NAIPQ13075 1403 aa15.27■□□□□ 0.03
PDE4D-212ENST00000505453 NPM1P06748 294 aaKnown RBP eCLIP15.26■□□□□ 0.03
PDE4D-212ENST00000505453 PRR29P0C7W0 189 aa15.26■□□□□ 0.03
PDE4D-212ENST00000505453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.25■□□□□ 0.03
PDE4D-212ENST00000505453 HNRNPMP52272 730 aaKnown RBP eCLIP15.25■□□□□ 0.032e-6■■■□□ 14.7
PDE4D-212ENST00000505453 CLSPNQ9HAW4 1339 aa15.23■□□□□ 0.03
PDE4D-212ENST00000505453 AKNAQ7Z591 1439 aa15.23■□□□□ 0.03
PDE4D-212ENST00000505453 ROCK1Q13464 1354 aa15.22■□□□□ 0.03
PDE4D-212ENST00000505453 PRKAR2AP13861 404 aaKnown RBP15.22■□□□□ 0.03
PDE4D-212ENST00000505453 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
PDE4D-212ENST00000505453 ITSN2Q9NZM3 1697 aa15.22■□□□□ 0.03
PDE4D-212ENST00000505453 WDR7Q9Y4E6 1490 aa15.21■□□□□ 0.03
PDE4D-212ENST00000505453 PLCH2O75038 1416 aa15.21■□□□□ 0.03
PDE4D-212ENST00000505453 ASXL2Q76L83 1435 aa15.21■□□□□ 0.03
PDE4D-212ENST00000505453 DNMT1P26358 1616 aaKnown RBP15.2■□□□□ 0.02
PDE4D-212ENST00000505453 TTC37Q6PGP7 1564 aa15.2■□□□□ 0.02
PDE4D-212ENST00000505453 EFCAB2Q5VUJ9 269 aa15.19■□□□□ 0.02
PDE4D-212ENST00000505453 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
PDE4D-212ENST00000505453 MBD5Q9P267 1494 aa15.18■□□□□ 0.02
PDE4D-212ENST00000505453 CDC42BPAQ5VT25 1732 aa15.18■□□□□ 0.02
PDE4D-212ENST00000505453 TSPY4P0CV99 314 aa15.17■□□□□ 0.02
PDE4D-212ENST00000505453 TSPY10P0CW01 314 aa15.17■□□□□ 0.02
PDE4D-212ENST00000505453 RSPH4AQ5TD94 716 aa15.17■□□□□ 0.02
PDE4D-212ENST00000505453 ARHGAP5Q13017 1502 aa15.17■□□□□ 0.02
PDE4D-212ENST00000505453 NCOA1Q15788 1441 aa15.16■□□□□ 0.02
PDE4D-212ENST00000505453 PREX2Q70Z35 1606 aa15.15■□□□□ 0.02
PDE4D-212ENST00000505453 SAMD9LQ8IVG5 1584 aa15.15■□□□□ 0.02
PDE4D-212ENST00000505453 ANKRD30AQ9BXX3 1397 aa15.14■□□□□ 0.01
PDE4D-212ENST00000505453 TRIM52Q96A61 297 aa15.14■□□□□ 0.01
PDE4D-212ENST00000505453 KIAA1107Q9UPP5 1409 aa15.14■□□□□ 0.01
PDE4D-212ENST00000505453 ADGRL2O95490 1459 aa15.14■□□□□ 0.01
PDE4D-212ENST00000505453 MAPKBP1O60336 1514 aa15.13■□□□□ 0.01
PDE4D-212ENST00000505453 C9orf84Q5VXU9 1444 aa15.12■□□□□ 0.01
PDE4D-212ENST00000505453 RIMBP3CA6NJZ7 1639 aa15.12■□□□□ 0.01
PDE4D-212ENST00000505453 RIMBP3BA6NNM3 1639 aa15.12■□□□□ 0.01
PDE4D-212ENST00000505453 RIMBP3Q9UFD9 1639 aa15.12■□□□□ 0.01
PDE4D-212ENST00000505453 CDC42BPBQ9Y5S2 1711 aa15.12■□□□□ 0.01
PDE4D-212ENST00000505453 KDM6BO15054 1643 aa15.11■□□□□ 0.01
PDE4D-212ENST00000505453 PLEKHH2Q8IVE3 1493 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms