RNA–Protein interactions for RNA: ENST00000504722.5

CNGA1-204, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

TSL 4

Gene CNGA1, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-204ENST00000504722 STRCQ7RTU9 1775 aa9.52□□□□□ -0.88
CNGA1-204ENST00000504722 TTC37Q6PGP7 1564 aa9.52□□□□□ -0.89
CNGA1-204ENST00000504722 FHOD3Q2V2M9 1422 aa9.51□□□□□ -0.89
CNGA1-204ENST00000504722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.51□□□□□ -0.89
CNGA1-204ENST00000504722 HNRNPUL2Q1KMD3 747 aaKnown RBP9.51□□□□□ -0.89
CNGA1-204ENST00000504722 SIGLEC1Q9BZZ2 1709 aa9.51□□□□□ -0.89
CNGA1-204ENST00000504722 P3H3Q8IVL6 736 aa9.5□□□□□ -0.89
CNGA1-204ENST00000504722 CNKSR2Q8WXI2 1034 aa9.5□□□□□ -0.89
CNGA1-204ENST00000504722 EFCAB5A4FU69 1503 aa9.5□□□□□ -0.89
CNGA1-204ENST00000504722 ZFYVE16Q7Z3T8 1539 aa9.5□□□□□ -0.89
CNGA1-204ENST00000504722 ZMYM4Q5VZL5 1548 aa9.49□□□□□ -0.89
CNGA1-204ENST00000504722 PTPRTO14522 1441 aa9.48□□□□□ -0.89
CNGA1-204ENST00000504722 MAGI2Q86UL8 1455 aa9.48□□□□□ -0.89
CNGA1-204ENST00000504722 CEBPAP49715 358 aaPredicted RBP9.48□□□□□ -0.89
CNGA1-204ENST00000504722 CFAP74Q9C0B2 1584 aa9.48□□□□□ -0.89
CNGA1-204ENST00000504722 SETD1BQ9UPS6 1966 aaKnown RBP9.48□□□□□ -0.89
CNGA1-204ENST00000504722 UHRF1BP1Q6BDS2 1440 aa9.48□□□□□ -0.89
CNGA1-204ENST00000504722 IQSEC2Q5JU85 1478 aa9.47□□□□□ -0.89
CNGA1-204ENST00000504722 ARHGEF12Q9NZN5 1544 aa9.47□□□□□ -0.89
CNGA1-204ENST00000504722 LTBP4Q8N2S1 1624 aa9.46□□□□□ -0.89
CNGA1-204ENST00000504722 RAPGEF6Q8TEU7 1601 aa9.45□□□□□ -0.9
CNGA1-204ENST00000504722 HECW1Q76N89 1606 aa9.45□□□□□ -0.9
CNGA1-204ENST00000504722 PLEKHD1A6NEE1 506 aa9.44□□□□□ -0.9
CNGA1-204ENST00000504722 NCBP3Q53F19 620 aaKnown RBP9.44□□□□□ -0.9
CNGA1-204ENST00000504722 ATP10AO60312 1499 aa9.44□□□□□ -0.9
CNGA1-204ENST00000504722 UBAP1LF5GYI3 381 aa9.42□□□□□ -0.9
CNGA1-204ENST00000504722 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.41□□□□□ -0.9
CNGA1-204ENST00000504722 NUP153P49790 1475 aaKnown RBP9.41□□□□□ -0.9
CNGA1-204ENST00000504722 PRXQ9BXM0 1461 aa9.41□□□□□ -0.9
CNGA1-204ENST00000504722 C9orf84Q5VXU9 1444 aa9.41□□□□□ -0.9
CNGA1-204ENST00000504722 SCAPERQ9BY12 1400 aa9.41□□□□□ -0.9
CNGA1-204ENST00000504722 SAMD9Q5K651 1589 aa9.4□□□□□ -0.9
CNGA1-204ENST00000504722 NCOA1Q15788 1441 aa9.38□□□□□ -0.91
CNGA1-204ENST00000504722 C3P01024 1663 aa9.37□□□□□ -0.91
CNGA1-204ENST00000504722 KCNA4P22459 653 aa9.37□□□□□ -0.91
CNGA1-204ENST00000504722 HOXD11P31277 338 aaPredicted RBP9.37□□□□□ -0.91
CNGA1-204ENST00000504722 ESF1Q9H501 851 aaKnown RBP9.37□□□□□ -0.91
CNGA1-204ENST00000504722 RNF216Q9NWF9 866 aaPredicted RBP9.37□□□□□ -0.91
CNGA1-204ENST00000504722 TRAPPC8Q9Y2L5 1435 aa9.37□□□□□ -0.91
CNGA1-204ENST00000504722 PLCH2O75038 1416 aa9.36□□□□□ -0.91
CNGA1-204ENST00000504722 MED1Q15648 1581 aaPredicted RBP9.36□□□□□ -0.91
CNGA1-204ENST00000504722 ZNF335Q9H4Z2 1342 aaPredicted RBP9.35□□□□□ -0.91
CNGA1-204ENST00000504722 C1QBPQ07021 282 aaKnown RBP9.35□□□□□ -0.91
CNGA1-204ENST00000504722 EFCAB2Q5VUJ9 269 aa9.35□□□□□ -0.91
CNGA1-204ENST00000504722 HSPA1LP34931 641 aa9.34□□□□□ -0.91
CNGA1-204ENST00000504722 MYT1LQ9UL68 1186 aa9.34□□□□□ -0.91
CNGA1-204ENST00000504722 CAMSAP1Q5T5Y3 1602 aa9.34□□□□□ -0.91
CNGA1-204ENST00000504722 NPM3O75607 178 aaKnown RBP9.33□□□□□ -0.92
CNGA1-204ENST00000504722 ZNF518AQ6AHZ1 1483 aa9.33□□□□□ -0.92
CNGA1-204ENST00000504722 NCKAP5LQ9HCH0 1330 aa9.32□□□□□ -0.92
CNGA1-204ENST00000504722 RANGAP1P46060 587 aaPredicted RBP9.32□□□□□ -0.92
CNGA1-204ENST00000504722 AFAP1Q8N556 730 aa9.32□□□□□ -0.92
CNGA1-204ENST00000504722 DCAF8L1A6NGE4 600 aa9.31□□□□□ -0.92
CNGA1-204ENST00000504722 REREQ9P2R6 1566 aa9.31□□□□□ -0.92
CNGA1-204ENST00000504722 DIP2CQ9Y2E4 1556 aa9.31□□□□□ -0.92
CNGA1-204ENST00000504722 MYO5CQ9NQX4 1742 aa9.31□□□□□ -0.92
CNGA1-204ENST00000504722 KDM5CP41229 1560 aa9.3□□□□□ -0.92
CNGA1-204ENST00000504722 PIP4K2BP78356 416 aa9.3□□□□□ -0.92
CNGA1-204ENST00000504722 AGLP35573 1532 aa9.3□□□□□ -0.92
CNGA1-204ENST00000504722 CNTLNQ9NXG0 1405 aa9.3□□□□□ -0.92
CNGA1-204ENST00000504722 TOM1O60784 492 aa9.29□□□□□ -0.92
CNGA1-204ENST00000504722 PKD2Q13563 968 aa9.29□□□□□ -0.92
CNGA1-204ENST00000504722 CDK13Q14004 1512 aaKnown RBP9.29□□□□□ -0.92
CNGA1-204ENST00000504722 NPATQ14207 1427 aa9.29□□□□□ -0.92
CNGA1-204ENST00000504722 ABCA6Q8N139 1617 aa9.27□□□□□ -0.92
CNGA1-204ENST00000504722 PLA2R1Q13018 1463 aa9.27□□□□□ -0.93
CNGA1-204ENST00000504722 MLH3Q9UHC1 1453 aa9.27□□□□□ -0.93
CNGA1-204ENST00000504722 MROH2AA6NES4 1674 aa9.26□□□□□ -0.93
CNGA1-204ENST00000504722 ARHGAP5Q13017 1502 aa9.26□□□□□ -0.93
CNGA1-204ENST00000504722 ZMYM3Q14202 1370 aa9.25□□□□□ -0.93
CNGA1-204ENST00000504722 SUPT6HQ7KZ85 1726 aaKnown RBP9.25□□□□□ -0.93
CNGA1-204ENST00000504722 CSRNP3Q8WYN3 585 aa9.25□□□□□ -0.93
CNGA1-204ENST00000504722 TCOF1Q13428 1488 aaKnown RBP9.25□□□□□ -0.93
CNGA1-204ENST00000504722 ATP1B4Q9UN42 357 aaPredicted RBP9.24□□□□□ -0.93
CNGA1-204ENST00000504722 CDK11AQ9UQ88 783 aaPredicted RBP9.24□□□□□ -0.93
CNGA1-204ENST00000504722 ZNF142P52746 1687 aaPredicted RBP9.23□□□□□ -0.93
CNGA1-204ENST00000504722 KIF14Q15058 1648 aa9.23□□□□□ -0.93
CNGA1-204ENST00000504722 MYO3AQ8NEV4 1616 aa9.23□□□□□ -0.93
CNGA1-204ENST00000504722 CPS1P31327 1500 aa9.22□□□□□ -0.93
CNGA1-204ENST00000504722 CEP170BQ9Y4F5 1589 aaPredicted RBP9.22□□□□□ -0.93
CNGA1-204ENST00000504722 KIDINS220Q9ULH0 1771 aa9.22□□□□□ -0.93
CNGA1-204ENST00000504722 PTPRKQ15262 1439 aa9.21□□□□□ -0.94
CNGA1-204ENST00000504722 CDC42BPBQ9Y5S2 1711 aa9.2□□□□□ -0.94
CNGA1-204ENST00000504722 TROQ12816 1431 aaPredicted RBP9.2□□□□□ -0.94
CNGA1-204ENST00000504722 SHANK2Q9UPX8 1470 aa9.2□□□□□ -0.94
CNGA1-204ENST00000504722 CLIP1P30622 1438 aa9.19□□□□□ -0.94
CNGA1-204ENST00000504722 ABCC1P33527 1531 aa9.19□□□□□ -0.94
CNGA1-204ENST00000504722 CLTCQ00610 1675 aaKnown RBP9.19□□□□□ -0.94
CNGA1-204ENST00000504722 SRCAPQ6ZRS2 3230 aa9.18□□□□□ -0.94
CNGA1-204ENST00000504722 ITSN2Q9NZM3 1697 aa9.18□□□□□ -0.94
CNGA1-204ENST00000504722 RGS17Q9UGC6 210 aaPredicted RBP9.18□□□□□ -0.94
CNGA1-204ENST00000504722 POLR1AO95602 1720 aaPredicted RBP9.17□□□□□ -0.94
CNGA1-204ENST00000504722 DNMT1P26358 1616 aaKnown RBP9.16□□□□□ -0.94
CNGA1-204ENST00000504722 ALKQ9UM73 1620 aa9.16□□□□□ -0.94
CNGA1-204ENST00000504722 A2ML1A8K2U0 1454 aa9.16□□□□□ -0.94
CNGA1-204ENST00000504722 FMN1Q68DA7 1419 aa9.16□□□□□ -0.94
CNGA1-204ENST00000504722 PREX2Q70Z35 1606 aa9.16□□□□□ -0.94
CNGA1-204ENST00000504722 GGT6Q6P531 493 aa9.15□□□□□ -0.94
CNGA1-204ENST00000504722 NEURL4Q96JN8 1562 aa9.15□□□□□ -0.95
CNGA1-204ENST00000504722 SPAG9O60271 1321 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms