RNA–Protein interactions for RNA: ENST00000504612.5

ATP2C1-207, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2C1, Length 3,148 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-207ENST00000504612 CUX1P39880 1505 aa7.59□□□□□ -1.19
ATP2C1-207ENST00000504612 SPOCK2Q92563 424 aa7.59□□□□□ -1.19
ATP2C1-207ENST00000504612 KIF13AQ9H1H9 1805 aa7.58□□□□□ -1.2
ATP2C1-207ENST00000504612 RBM25P49756 843 aaKnown RBP7.58□□□□□ -1.2
ATP2C1-207ENST00000504612 ZC3H15Q8WU90 426 aaKnown RBP7.58□□□□□ -1.2
ATP2C1-207ENST00000504612 BIVM-ERCC5R4GMW8 1640 aa7.58□□□□□ -1.2
ATP2C1-207ENST00000504612 SYNJ2O15056 1496 aa7.58□□□□□ -1.2
ATP2C1-207ENST00000504612 AQRO60306 1485 aaKnown RBP eCLIP7.58□□□□□ -1.23e-7■■■■■ 38.5
ATP2C1-207ENST00000504612 IL27Q8NEV9 243 aa7.58□□□□□ -1.2
ATP2C1-207ENST00000504612 KCNV2Q8TDN2 545 aa7.58□□□□□ -1.2
ATP2C1-207ENST00000504612 SNAPC4Q5SXM2 1469 aa7.57□□□□□ -1.2
ATP2C1-207ENST00000504612 GRIN2BQ13224 1484 aa7.57□□□□□ -1.2
ATP2C1-207ENST00000504612 MKRN3Q13064 507 aaKnown RBP7.57□□□□□ -1.2
ATP2C1-207ENST00000504612 FGD5Q6ZNL6 1462 aa7.56□□□□□ -1.2
ATP2C1-207ENST00000504612 RGS22Q8NE09 1264 aa7.56□□□□□ -1.2
ATP2C1-207ENST00000504612 SUPT16HQ9Y5B9 1047 aaKnown RBP7.56□□□□□ -1.2
ATP2C1-207ENST00000504612 ABCA10Q8WWZ4 1543 aa7.56□□□□□ -1.2
ATP2C1-207ENST00000504612 GTPBP6O43824 516 aaPredicted RBP7.56□□□□□ -1.2
ATP2C1-207ENST00000504612 ADAMTS12P58397 1594 aa7.55□□□□□ -1.2
ATP2C1-207ENST00000504612 AEBP1Q8IUX7 1158 aa7.55□□□□□ -1.2
ATP2C1-207ENST00000504612 CCDC82Q8N4S0 544 aa7.55□□□□□ -1.2
ATP2C1-207ENST00000504612 RNF25Q96BH1 459 aaPredicted RBP7.55□□□□□ -1.2
ATP2C1-207ENST00000504612 RAD54L2Q9Y4B4 1467 aa7.54□□□□□ -1.2
ATP2C1-207ENST00000504612 SOGA1O94964 1423 aa7.53□□□□□ -1.2
ATP2C1-207ENST00000504612 ANP32EQ9BTT0 268 aa7.52□□□□□ -1.21
ATP2C1-207ENST00000504612 NUP160Q12769 1436 aa7.52□□□□□ -1.21
ATP2C1-207ENST00000504612 CEP170Q5SW79 1584 aa7.51□□□□□ -1.21
ATP2C1-207ENST00000504612 TOP2BQ02880 1626 aa7.5□□□□□ -1.21
ATP2C1-207ENST00000504612 KCNH8Q96L42 1107 aa7.5□□□□□ -1.21
ATP2C1-207ENST00000504612 CIZ1Q9ULV3 898 aaPredicted RBP7.5□□□□□ -1.21
ATP2C1-207ENST00000504612 HSP90B1P14625 803 aaKnown RBP7.49□□□□□ -1.21
ATP2C1-207ENST00000504612 HS6ST3Q8IZP7 471 aa7.49□□□□□ -1.21
ATP2C1-207ENST00000504612 ERICH3Q5RHP9 1530 aa7.49□□□□□ -1.21
ATP2C1-207ENST00000504612 GAPVD1Q14C86 1478 aa7.49□□□□□ -1.21
ATP2C1-207ENST00000504612 GRIN2AQ12879 1464 aa7.48□□□□□ -1.21
ATP2C1-207ENST00000504612 ERCC6L2Q5T890 1561 aa7.47□□□□□ -1.21
ATP2C1-207ENST00000504612 CEP162Q5TB80 1403 aa7.47□□□□□ -1.21
ATP2C1-207ENST00000504612 MAPKBP1O60336 1514 aa7.46□□□□□ -1.21
ATP2C1-207ENST00000504612 RUSC2Q8N2Y8 1516 aa7.46□□□□□ -1.22
ATP2C1-207ENST00000504612 CYB5RLQ6IPT4 315 aa7.45□□□□□ -1.22
ATP2C1-207ENST00000504612 CLUAP1Q96AJ1 413 aa7.45□□□□□ -1.22
ATP2C1-207ENST00000504612 TDRD9Q8NDG6 1382 aaKnown RBP7.45□□□□□ -1.22
ATP2C1-207ENST00000504612 CADPS2Q86UW7 1296 aa7.44□□□□□ -1.22
ATP2C1-207ENST00000504612 ITGAEP38570 1179 aa7.44□□□□□ -1.22
ATP2C1-207ENST00000504612 USP35Q9P2H5 1018 aa7.43□□□□□ -1.22
ATP2C1-207ENST00000504612 MFAP1P55081 439 aaKnown RBP7.43□□□□□ -1.22
ATP2C1-207ENST00000504612 ZNF219Q9P2Y4 722 aaPredicted RBP7.43□□□□□ -1.22
ATP2C1-207ENST00000504612 DIP2BQ9P265 1576 aa7.43□□□□□ -1.22
ATP2C1-207ENST00000504612 PUS7Q96PZ0 661 aaKnown RBP7.43□□□□□ -1.22
ATP2C1-207ENST00000504612 POLR3GLQ9BT43 218 aa7.42□□□□□ -1.22
ATP2C1-207ENST00000504612 GZF1Q9H116 711 aaPredicted RBP7.42□□□□□ -1.22
ATP2C1-207ENST00000504612 FHAD1B1AJZ9 1412 aa7.42□□□□□ -1.22
ATP2C1-207ENST00000504612 SEMA3EO15041 775 aa7.42□□□□□ -1.22
ATP2C1-207ENST00000504612 C1QBPQ07021 282 aaKnown RBP7.41□□□□□ -1.22
ATP2C1-207ENST00000504612 RNF39Q9H2S5 420 aa7.41□□□□□ -1.22
ATP2C1-207ENST00000504612 ADCY10Q96PN6 1610 aa7.4□□□□□ -1.22
ATP2C1-207ENST00000504612 PPRC1Q5VV67 1664 aaKnown RBP7.4□□□□□ -1.22
ATP2C1-207ENST00000504612 CUL7Q14999 1698 aa7.4□□□□□ -1.23
ATP2C1-207ENST00000504612 WRNQ14191 1432 aaPredicted RBP eCLIP7.39□□□□□ -1.23
ATP2C1-207ENST00000504612 ZNF692Q9BU19 519 aaPredicted RBP7.39□□□□□ -1.23
ATP2C1-207ENST00000504612 GLI2P10070 1586 aa7.39□□□□□ -1.23
ATP2C1-207ENST00000504612 TMCO4Q5TGY1 634 aa7.38□□□□□ -1.23
ATP2C1-207ENST00000504612 WDR70Q9NW82 654 aa7.38□□□□□ -1.23
ATP2C1-207ENST00000504612 ABCC10Q5T3U5 1492 aa7.38□□□□□ -1.23
ATP2C1-207ENST00000504612 POLA2Q14181 598 aa7.37□□□□□ -1.23
ATP2C1-207ENST00000504612 RBM19Q9Y4C8 960 aaKnown RBP7.37□□□□□ -1.23
ATP2C1-207ENST00000504612 CHMP7Q8WUX9 453 aaPredicted RBP7.36□□□□□ -1.23
ATP2C1-207ENST00000504612 UBE2Q2Q8WVN8 375 aa7.36□□□□□ -1.23
ATP2C1-207ENST00000504612 IRF5Q13568 498 aa7.36□□□□□ -1.23
ATP2C1-207ENST00000504612 KDM4CQ9H3R0 1056 aa7.36□□□□□ -1.23
ATP2C1-207ENST00000504612 ZMYND10O75800 440 aa7.35□□□□□ -1.23
ATP2C1-207ENST00000504612 P3H3Q8IVL6 736 aa7.35□□□□□ -1.23
ATP2C1-207ENST00000504612 FAM177A1Q8N128 213 aaPredicted RBP7.35□□□□□ -1.23
ATP2C1-207ENST00000504612 TNIKQ9UKE5 1360 aa7.35□□□□□ -1.23
ATP2C1-207ENST00000504612 CACNB1Q02641 598 aaPredicted RBP7.34□□□□□ -1.23
ATP2C1-207ENST00000504612 PLCD3Q8N3E9 789 aa7.34□□□□□ -1.23
ATP2C1-207ENST00000504612 HIRIP3Q9BW71 556 aaPredicted RBP7.34□□□□□ -1.23
ATP2C1-207ENST00000504612 TRIM52Q96A61 297 aa7.34□□□□□ -1.23
ATP2C1-207ENST00000504612 RETREG2Q8NC44 543 aa7.34□□□□□ -1.24
ATP2C1-207ENST00000504612 FAM117AQ9C073 453 aa7.34□□□□□ -1.24
ATP2C1-207ENST00000504612 MAP3K4Q9Y6R4 1608 aa7.33□□□□□ -1.24
ATP2C1-207ENST00000504612 BRD2P25440 801 aaKnown RBP7.33□□□□□ -1.24
ATP2C1-207ENST00000504612 ZNF777Q9ULD5 760 aaPredicted RBP7.32□□□□□ -1.24
ATP2C1-207ENST00000504612 KDM6BO15054 1643 aa7.32□□□□□ -1.24
ATP2C1-207ENST00000504612 IRX6P78412 446 aaPredicted RBP7.32□□□□□ -1.24
ATP2C1-207ENST00000504612 STK25O00506 426 aa7.32□□□□□ -1.24
ATP2C1-207ENST00000504612 HMGB1P09429 215 aaKnown RBP7.32□□□□□ -1.24
ATP2C1-207ENST00000504612 UHRF1BP1LA0JNW5 1464 aa7.31□□□□□ -1.24
ATP2C1-207ENST00000504612 DDX10Q13206 875 aaKnown RBP7.31□□□□□ -1.24
ATP2C1-207ENST00000504612 KIAA0586Q9BVV6 1533 aa7.31□□□□□ -1.24
ATP2C1-207ENST00000504612 PRG4Q92954 1404 aaPredicted RBP7.3□□□□□ -1.24
ATP2C1-207ENST00000504612 U3KPZ7 1027 aaPredicted RBP7.3□□□□□ -1.24
ATP2C1-207ENST00000504612 DHX57Q6P158 1386 aaKnown RBP7.29□□□□□ -1.24
ATP2C1-207ENST00000504612 TRAIPQ9BWF2 469 aa7.29□□□□□ -1.24
ATP2C1-207ENST00000504612 CWC22Q9HCG8 908 aaKnown RBP7.29□□□□□ -1.24
ATP2C1-207ENST00000504612 CLSPNQ9HAW4 1339 aa7.28□□□□□ -1.24
ATP2C1-207ENST00000504612 TSPOAP1O95153 1857 aa7.27□□□□□ -1.25
ATP2C1-207ENST00000504612 E9PSI1 815 aa7.27□□□□□ -1.25
ATP2C1-207ENST00000504612 TRAK2O60296 914 aa7.27□□□□□ -1.25
ATP2C1-207ENST00000504612 KANK4Q5T7N3 995 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms