RNA–Protein interactions for RNA: ENST00000504263.1

PCAT4-201, prostate cancer associated transcript 4, humanhuman

TSL 1 (best) BASIC

Gene PCAT4, Length 2,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT4-201ENST00000504263 ZNF775Q96BV0 537 aaPredicted RBP5.37□□□□□ -1.55
PCAT4-201ENST00000504263 PDCD7Q8N8D1 485 aaKnown RBP5.36□□□□□ -1.55
PCAT4-201ENST00000504263 SPDYE4A6NLX3 237 aa5.36□□□□□ -1.55
PCAT4-201ENST00000504263 ZNF787Q6DD87 383 aa5.36□□□□□ -1.55
PCAT4-201ENST00000504263 CLSPNQ9HAW4 1339 aa5.35□□□□□ -1.55
PCAT4-201ENST00000504263 ZNF710Q8N1W2 664 aa5.35□□□□□ -1.55
PCAT4-201ENST00000504263 ANKRD13DQ6ZTN6 518 aa5.34□□□□□ -1.55
PCAT4-201ENST00000504263 NCAPD3P42695 1498 aa5.34□□□□□ -1.55
PCAT4-201ENST00000504263 SLC24A1O60721 1099 aa5.33□□□□□ -1.56
PCAT4-201ENST00000504263 SMARCA4P51532 1647 aa5.32□□□□□ -1.56
PCAT4-201ENST00000504263 A0A0G2JS52 829 aa5.32□□□□□ -1.56
PCAT4-201ENST00000504263 SMARCA2P51531 1590 aa5.32□□□□□ -1.56
PCAT4-201ENST00000504263 BAZ1AQ9NRL2 1556 aaPredicted RBP5.32□□□□□ -1.56
PCAT4-201ENST00000504263 ATAD2BQ9ULI0 1458 aa5.32□□□□□ -1.56
PCAT4-201ENST00000504263 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
PCAT4-201ENST00000504263 DOK7Q18PE1 504 aa5.3□□□□□ -1.56
PCAT4-201ENST00000504263 CSRNP3Q8WYN3 585 aa5.3□□□□□ -1.56
PCAT4-201ENST00000504263 HMGXB3Q12766 1538 aa5.29□□□□□ -1.56
PCAT4-201ENST00000504263 BAZ1BQ9UIG0 1483 aaKnown RBP5.28□□□□□ -1.56
PCAT4-201ENST00000504263 PEG3Q9GZU2 1588 aa5.27□□□□□ -1.57
PCAT4-201ENST00000504263 ANO8Q9HCE9 1232 aaPredicted RBP5.27□□□□□ -1.57
PCAT4-201ENST00000504263 MROH2BQ7Z745 1585 aa5.27□□□□□ -1.57
PCAT4-201ENST00000504263 KRTAP1-3Q8IUG1 177 aa5.26□□□□□ -1.57
PCAT4-201ENST00000504263 LSM11P83369 360 aaKnown RBP eCLIP5.25□□□□□ -1.57
PCAT4-201ENST00000504263 ERCC6Q03468 1493 aa5.25□□□□□ -1.57
PCAT4-201ENST00000504263 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.24□□□□□ -1.57
PCAT4-201ENST00000504263 DIEXFQ68CQ4 756 aaKnown RBP5.24□□□□□ -1.57
PCAT4-201ENST00000504263 DAXXQ9UER7 740 aaPredicted RBP5.24□□□□□ -1.57
PCAT4-201ENST00000504263 RIMBP2O15034 1052 aa5.24□□□□□ -1.57
PCAT4-201ENST00000504263 PLEKHG5O94827 1062 aa5.22□□□□□ -1.57
PCAT4-201ENST00000504263 NUBP1P53384 320 aa5.22□□□□□ -1.57
PCAT4-201ENST00000504263 NESP48681 1621 aa5.22□□□□□ -1.57
PCAT4-201ENST00000504263 WIZO95785 1651 aa5.22□□□□□ -1.57
PCAT4-201ENST00000504263 UBE2Q2Q8WVN8 375 aa5.21□□□□□ -1.58
PCAT4-201ENST00000504263 ZSWIM6Q9HCJ5 1215 aa5.21□□□□□ -1.58
PCAT4-201ENST00000504263 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.21□□□□□ -1.58
PCAT4-201ENST00000504263 CUX2O14529 1486 aa5.21□□□□□ -1.58
PCAT4-201ENST00000504263 LCE2BO14633 110 aa5.2□□□□□ -1.58
PCAT4-201ENST00000504263 MKRN3Q13064 507 aaKnown RBP5.2□□□□□ -1.58
PCAT4-201ENST00000504263 MIER1Q8N108 512 aa5.2□□□□□ -1.58
PCAT4-201ENST00000504263 KRTAP9-2Q9BYQ4 174 aa5.2□□□□□ -1.58
PCAT4-201ENST00000504263 LAMC3Q9Y6N6 1575 aa5.2□□□□□ -1.58
PCAT4-201ENST00000504263 GPR153Q6NV75 609 aa5.2□□□□□ -1.58
PCAT4-201ENST00000504263 TRIM41Q8WV44 630 aa5.2□□□□□ -1.58
PCAT4-201ENST00000504263 TSHZ2Q9NRE2 1034 aa5.2□□□□□ -1.58
PCAT4-201ENST00000504263 PDS5BQ9NTI5 1447 aa5.2□□□□□ -1.58
PCAT4-201ENST00000504263 KRTAP9-6A0A140TA67 174 aa5.19□□□□□ -1.58
PCAT4-201ENST00000504263 ERICH6BQ5W0A0 696 aa5.19□□□□□ -1.58
PCAT4-201ENST00000504263 CADPSQ9ULU8 1353 aa5.19□□□□□ -1.58
PCAT4-201ENST00000504263 RSF1Q96T23 1441 aaPredicted RBP5.19□□□□□ -1.58
PCAT4-201ENST00000504263 INSM1Q01101 510 aaPredicted RBP5.18□□□□□ -1.58
PCAT4-201ENST00000504263 DPY19L2Q6NUT2 758 aa5.18□□□□□ -1.58
PCAT4-201ENST00000504263 ILDR1Q86SU0 546 aaPredicted RBP5.18□□□□□ -1.58
PCAT4-201ENST00000504263 PCDHB8Q9UN66 801 aa5.18□□□□□ -1.58
PCAT4-201ENST00000504263 TREML4Q6UXN2 200 aa5.17□□□□□ -1.58
PCAT4-201ENST00000504263 DNAJC5Q9H3Z4 198 aa5.17□□□□□ -1.58
PCAT4-201ENST00000504263 BOLA1Q9Y3E2 137 aa5.16□□□□□ -1.58
PCAT4-201ENST00000504263 GOLGA2Q08379 1002 aa5.16□□□□□ -1.58
PCAT4-201ENST00000504263 KIF21AQ7Z4S6 1674 aa5.15□□□□□ -1.58
PCAT4-201ENST00000504263 EIF5BO60841 1220 aaKnown RBP5.15□□□□□ -1.59
PCAT4-201ENST00000504263 FAM212AQ96EL1 285 aa5.15□□□□□ -1.59
PCAT4-201ENST00000504263 TOP2AP11388 1531 aaKnown RBP5.15□□□□□ -1.59
PCAT4-201ENST00000504263 SUPT16HQ9Y5B9 1047 aaKnown RBP5.14□□□□□ -1.59
PCAT4-201ENST00000504263 ZNF316A6NFI3 1004 aaPredicted RBP5.14□□□□□ -1.59
PCAT4-201ENST00000504263 G3V3G9 751 aa5.14□□□□□ -1.59
PCAT4-201ENST00000504263 SUPT5HO00267 1087 aaKnown RBP5.14□□□□□ -1.59
PCAT4-201ENST00000504263 DCAF8Q5TAQ9 597 aa5.14□□□□□ -1.59
PCAT4-201ENST00000504263 PROM2Q8N271 834 aa5.14□□□□□ -1.59
PCAT4-201ENST00000504263 THOC2Q8NI27 1593 aaKnown RBP5.13□□□□□ -1.59
PCAT4-201ENST00000504263 CFTRP13569 1480 aa5.13□□□□□ -1.59
PCAT4-201ENST00000504263 PBX2P40425 430 aa5.12□□□□□ -1.59
PCAT4-201ENST00000504263 POTEEQ6S8J3 1075 aa5.12□□□□□ -1.59
PCAT4-201ENST00000504263 BTBD11A6QL63 1104 aa5.12□□□□□ -1.59
PCAT4-201ENST00000504263 FANCD2Q9BXW9 1451 aa5.11□□□□□ -1.59
PCAT4-201ENST00000504263 MRC2Q9UBG0 1479 aa5.11□□□□□ -1.59
PCAT4-201ENST00000504263 CEP164Q9UPV0 1460 aa5.11□□□□□ -1.59
PCAT4-201ENST00000504263 GFRA3O60609 400 aa5.11□□□□□ -1.59
PCAT4-201ENST00000504263 FAM181BA6NEQ2 426 aa5.11□□□□□ -1.59
PCAT4-201ENST00000504263 PYGBP11216 843 aa5.11□□□□□ -1.59
PCAT4-201ENST00000504263 CCDC88BA6NC98 1476 aa5.1□□□□□ -1.59
PCAT4-201ENST00000504263 NRG2O14511 850 aaPredicted RBP5.1□□□□□ -1.59
PCAT4-201ENST00000504263 ARSIQ5FYB1 569 aa5.1□□□□□ -1.59
PCAT4-201ENST00000504263 WDR62O43379 1518 aa5.1□□□□□ -1.59
PCAT4-201ENST00000504263 LOC105371045A0A1W2PR82 267 aa5.09□□□□□ -1.59
PCAT4-201ENST00000504263 PSMG3-AS1Q96PY0 264 aa5.08□□□□□ -1.6
PCAT4-201ENST00000504263 PRDM2Q13029 1718 aa5.08□□□□□ -1.6
PCAT4-201ENST00000504263 ADGRD1Q6QNK2 874 aa5.08□□□□□ -1.6
PCAT4-201ENST00000504263 AXIN2Q9Y2T1 843 aa5.08□□□□□ -1.6
PCAT4-201ENST00000504263 FANCIQ9NVI1 1328 aa5.07□□□□□ -1.6
PCAT4-201ENST00000504263 ZBTB47Q9UFB7 747 aaPredicted RBP5.06□□□□□ -1.6
PCAT4-201ENST00000504263 XP32Q5T750 250 aa5.06□□□□□ -1.6
PCAT4-201ENST00000504263 URB2Q14146 1524 aaKnown RBP5.06□□□□□ -1.6
PCAT4-201ENST00000504263 TMEM92Q6UXU6 159 aa5.05□□□□□ -1.6
PCAT4-201ENST00000504263 PLCD3Q8N3E9 789 aa5.05□□□□□ -1.6
PCAT4-201ENST00000504263 CCER1Q8TC90 406 aaPredicted RBP5.05□□□□□ -1.6
PCAT4-201ENST00000504263 KHSRPQ92945 711 aaKnown RBP eCLIP5.05□□□□□ -1.6
PCAT4-201ENST00000504263 KCTD12Q96CX2 325 aaKnown RBP5.05□□□□□ -1.6
PCAT4-201ENST00000504263 RBM19Q9Y4C8 960 aaKnown RBP5.05□□□□□ -1.6
PCAT4-201ENST00000504263 ABCC8Q09428 1581 aa5.04□□□□□ -1.6
PCAT4-201ENST00000504263 KRTAP4-8A0A0G2JLE6 195 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms