RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 CCER2I3L3R5 266 aa15.78■□□□□ 0.12
PAPD4-207ENST00000504233 KIAA0586Q9BVV6 1533 aa15.78■□□□□ 0.12
PAPD4-207ENST00000504233 NUP153P49790 1475 aaKnown RBP15.78■□□□□ 0.12
PAPD4-207ENST00000504233 RBM19Q9Y4C8 960 aaKnown RBP15.78■□□□□ 0.12
PAPD4-207ENST00000504233 KIAA0556O60303 1618 aa15.78■□□□□ 0.12
PAPD4-207ENST00000504233 ERCC6Q03468 1493 aa15.77■□□□□ 0.12
PAPD4-207ENST00000504233 GRIN2AQ12879 1464 aa15.77■□□□□ 0.12
PAPD4-207ENST00000504233 WASHC2AQ641Q2 1341 aa15.77■□□□□ 0.11
PAPD4-207ENST00000504233 DAPK1P53355 1430 aa15.76■□□□□ 0.11
PAPD4-207ENST00000504233 PRG4Q92954 1404 aaPredicted RBP15.76■□□□□ 0.11
PAPD4-207ENST00000504233 EIF4G3O43432 1585 aaKnown RBP15.76■□□□□ 0.11
PAPD4-207ENST00000504233 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
PAPD4-207ENST00000504233 ABCC5O15440 1437 aa15.75■□□□□ 0.11
PAPD4-207ENST00000504233 ERICH6Q7L0X2 663 aa15.75■□□□□ 0.11
PAPD4-207ENST00000504233 CDK11AQ9UQ88 783 aaPredicted RBP15.75■□□□□ 0.11
PAPD4-207ENST00000504233 EIF4G2P78344 907 aaKnown RBP eCLIP15.74■□□□□ 0.11
PAPD4-207ENST00000504233 PLB1Q6P1J6 1458 aa15.73■□□□□ 0.11
PAPD4-207ENST00000504233 CCDC136Q96JN2 1154 aa15.73■□□□□ 0.11
PAPD4-207ENST00000504233 CFDP1Q9UEE9 299 aaPredicted RBP15.73■□□□□ 0.11
PAPD4-207ENST00000504233 AKNAQ7Z591 1439 aa15.73■□□□□ 0.11
PAPD4-207ENST00000504233 RAPGEF6Q8TEU7 1601 aa15.72■□□□□ 0.11
PAPD4-207ENST00000504233 ANO8Q9HCE9 1232 aaPredicted RBP15.72■□□□□ 0.11
PAPD4-207ENST00000504233 C11orf95C9JLR9 678 aaPredicted RBP15.72■□□□□ 0.11
PAPD4-207ENST00000504233 NBPF8Q3BBV2 869 aa15.72■□□□□ 0.11
PAPD4-207ENST00000504233 MSH5O43196 834 aa15.71■□□□□ 0.11
PAPD4-207ENST00000504233 HNRNPUQ00839 825 aaKnown RBP eCLIP15.71■□□□□ 0.11
PAPD4-207ENST00000504233 CNGB1Q14028 1251 aaPredicted RBP15.7■□□□□ 0.1
PAPD4-207ENST00000504233 NEFLP07196 543 aa15.69■□□□□ 0.1
PAPD4-207ENST00000504233 ZNF326Q5BKZ1 582 aaKnown RBP15.69■□□□□ 0.1
PAPD4-207ENST00000504233 ANKRD30BQ9BXX2 1392 aa15.68■□□□□ 0.1
PAPD4-207ENST00000504233 NBR1Q14596 966 aa15.68■□□□□ 0.1
PAPD4-207ENST00000504233 RTN4Q9NQC3 1192 aaKnown RBP15.68■□□□□ 0.1
PAPD4-207ENST00000504233 JPH4Q96JJ6 628 aa15.68■□□□□ 0.1
PAPD4-207ENST00000504233 CCDC184Q52MB2 194 aa15.67■□□□□ 0.1
PAPD4-207ENST00000504233 CEP170Q5SW79 1584 aa15.67■□□□□ 0.1
PAPD4-207ENST00000504233 DNMT1P26358 1616 aaKnown RBP15.67■□□□□ 0.1
PAPD4-207ENST00000504233 ROCK1Q13464 1354 aa15.66■□□□□ 0.1
PAPD4-207ENST00000504233 TROQ12816 1431 aaPredicted RBP15.66■□□□□ 0.1
PAPD4-207ENST00000504233 CAMSAP2Q08AD1 1489 aa15.65■□□□□ 0.1
PAPD4-207ENST00000504233 KIF14Q15058 1648 aa15.64■□□□□ 0.09
PAPD4-207ENST00000504233 POLR3GLQ9BT43 218 aa15.64■□□□□ 0.09
PAPD4-207ENST00000504233 SYNJ2O15056 1496 aa15.63■□□□□ 0.09
PAPD4-207ENST00000504233 RPRD2Q5VT52 1461 aaKnown RBP15.63■□□□□ 0.09
PAPD4-207ENST00000504233 GPATCH8Q9UKJ3 1502 aaKnown RBP15.62■□□□□ 0.09
PAPD4-207ENST00000504233 MAGI1Q96QZ7 1491 aaPredicted RBP15.62■□□□□ 0.09
PAPD4-207ENST00000504233 CCDC7Q96M83 1385 aa15.61■□□□□ 0.09
PAPD4-207ENST00000504233 PKD2Q13563 968 aa15.6■□□□□ 0.09
PAPD4-207ENST00000504233 FAM9BQ8IZU0 186 aa15.6■□□□□ 0.09
PAPD4-207ENST00000504233 TEX14Q8IWB6 1497 aa15.6■□□□□ 0.09
PAPD4-207ENST00000504233 CNTLNQ9NXG0 1405 aa15.6■□□□□ 0.09
PAPD4-207ENST00000504233 NCOA1Q15788 1441 aa15.6■□□□□ 0.09
PAPD4-207ENST00000504233 CARMIL2Q6F5E8 1435 aa15.6■□□□□ 0.09
PAPD4-207ENST00000504233 PLEKHD1A6NEE1 506 aa15.59■□□□□ 0.09
PAPD4-207ENST00000504233 PZPP20742 1482 aa15.59■□□□□ 0.09
PAPD4-207ENST00000504233 SENP3-EIF4A1A0A087X0R7 540 aa15.57■□□□□ 0.08
PAPD4-207ENST00000504233 KIF7Q2M1P5 1343 aa15.57■□□□□ 0.08
PAPD4-207ENST00000504233 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.57■□□□□ 0.08
PAPD4-207ENST00000504233 PRKRIP1Q9H875 184 aaPredicted RBP15.56■□□□□ 0.08
PAPD4-207ENST00000504233 MRS2Q9HD23 443 aa15.56■□□□□ 0.08
PAPD4-207ENST00000504233 HNRNPMP52272 730 aaKnown RBP eCLIP15.54■□□□□ 0.089e-7■■■■□ 24.4
PAPD4-207ENST00000504233 ANKRD30AQ9BXX3 1397 aa15.54■□□□□ 0.08
PAPD4-207ENST00000504233 ITSN2Q9NZM3 1697 aa15.53■□□□□ 0.08
PAPD4-207ENST00000504233 NUP160Q12769 1436 aa15.53■□□□□ 0.08
PAPD4-207ENST00000504233 ANKRD50Q9ULJ7 1429 aa15.53■□□□□ 0.08
PAPD4-207ENST00000504233 KDM2AQ9Y2K7 1162 aa15.52■□□□□ 0.08
PAPD4-207ENST00000504233 NUP155O75694 1391 aa15.52■□□□□ 0.07
PAPD4-207ENST00000504233 KIAA1107Q9UPP5 1409 aa15.52■□□□□ 0.07
PAPD4-207ENST00000504233 ATP10BO94823 1461 aa15.51■□□□□ 0.07
PAPD4-207ENST00000504233 DEKP35659 375 aaKnown RBP15.51■□□□□ 0.07
PAPD4-207ENST00000504233 SALL2Q9Y467 1007 aaPredicted RBP15.51■□□□□ 0.07
PAPD4-207ENST00000504233 SPATA31E1Q6ZUB1 1445 aa15.5■□□□□ 0.07
PAPD4-207ENST00000504233 TSPY4P0CV99 314 aa15.5■□□□□ 0.07
PAPD4-207ENST00000504233 TSPY10P0CW01 314 aa15.5■□□□□ 0.07
PAPD4-207ENST00000504233 ADGBQ8N7X0 1667 aa15.49■□□□□ 0.07
PAPD4-207ENST00000504233 C9orf84Q5VXU9 1444 aa15.48■□□□□ 0.07
PAPD4-207ENST00000504233 USP47Q96K76 1375 aa15.48■□□□□ 0.07
PAPD4-207ENST00000504233 ADCY10Q96PN6 1610 aa15.47■□□□□ 0.07
PAPD4-207ENST00000504233 CDC42BPAQ5VT25 1732 aa15.47■□□□□ 0.07
PAPD4-207ENST00000504233 ADGRL2O95490 1459 aa15.47■□□□□ 0.07
PAPD4-207ENST00000504233 CROCC2H7BZ55 1655 aa15.46■□□□□ 0.07
PAPD4-207ENST00000504233 ABCA8O94911 1581 aa15.46■□□□□ 0.07
PAPD4-207ENST00000504233 ABCC10Q5T3U5 1492 aa15.45■□□□□ 0.06
PAPD4-207ENST00000504233 PTPRGP23470 1445 aa15.45■□□□□ 0.06
PAPD4-207ENST00000504233 KIF15Q9NS87 1388 aa15.44■□□□□ 0.06
PAPD4-207ENST00000504233 CARD11Q9BXL7 1154 aa15.44■□□□□ 0.06
PAPD4-207ENST00000504233 DCAF11Q8TEB1 546 aa15.43■□□□□ 0.06
PAPD4-207ENST00000504233 MBD5Q9P267 1494 aa15.43■□□□□ 0.06
PAPD4-207ENST00000504233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.42■□□□□ 0.064e-6■□□□□ 11.1
PAPD4-207ENST00000504233 PLPPR3Q6T4P5 718 aa15.42■□□□□ 0.06
PAPD4-207ENST00000504233 BCORL1Q5H9F3 1711 aa15.41■□□□□ 0.06
PAPD4-207ENST00000504233 RGL3Q3MIN7 710 aa15.4■□□□□ 0.06
PAPD4-207ENST00000504233 ST20-MTHFSA0A0A6YYL1 179 aa15.39■□□□□ 0.05
PAPD4-207ENST00000504233 DHX29Q7Z478 1369 aaKnown RBP15.38■□□□□ 0.05
PAPD4-207ENST00000504233 ZBED9Q6R2W3 1325 aa15.37■□□□□ 0.05
PAPD4-207ENST00000504233 IL27Q8NEV9 243 aa15.36■□□□□ 0.05
PAPD4-207ENST00000504233 SHANK2Q9UPX8 1470 aa15.36■□□□□ 0.05
PAPD4-207ENST00000504233 KDM5CP41229 1560 aa15.35■□□□□ 0.05
PAPD4-207ENST00000504233 POLR1AO95602 1720 aaPredicted RBP15.35■□□□□ 0.05
PAPD4-207ENST00000504233 B4GALNT3Q6L9W6 998 aa15.34■□□□□ 0.05
PAPD4-207ENST00000504233 SAMD9LQ8IVG5 1584 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms