RNA–Protein interactions for RNA: ENST00000503811.5

MATR3-206, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-206ENST00000503811 DAPK1P53355 1430 aa28.23■■■□□ 2.11
MATR3-206ENST00000503811 CNTLNQ9NXG0 1405 aa28.22■■■□□ 2.11
MATR3-206ENST00000503811 ZNF608Q9ULD9 1512 aaPredicted RBP28.21■■■□□ 2.11
MATR3-206ENST00000503811 ANKRD30BQ9BXX2 1392 aa28.21■■■□□ 2.11
MATR3-206ENST00000503811 ABCC5O15440 1437 aa28.2■■■□□ 2.11
MATR3-206ENST00000503811 NCOA1Q15788 1441 aa28.18■■■□□ 2.1
MATR3-206ENST00000503811 CCDC7Q96M83 1385 aa28.18■■■□□ 2.1
MATR3-206ENST00000503811 NUP153P49790 1475 aaKnown RBP28.16■■■□□ 2.1
MATR3-206ENST00000503811 RPRD2Q5VT52 1461 aaKnown RBP28.16■■■□□ 2.1
MATR3-206ENST00000503811 TEX14Q8IWB6 1497 aa28.16■■■□□ 2.1
MATR3-206ENST00000503811 DISP1Q96F81 1524 aa28.15■■■□□ 2.1
MATR3-206ENST00000503811 PRKRIP1Q9H875 184 aaPredicted RBP28.14■■■□□ 2.1
MATR3-206ENST00000503811 ROCK1Q13464 1354 aa28.14■■■□□ 2.1
MATR3-206ENST00000503811 MRC2Q9UBG0 1479 aa28.14■■■□□ 2.1
MATR3-206ENST00000503811 SLC4A1APQ9BWU0 796 aaKnown RBP28.13■■■□□ 2.09
MATR3-206ENST00000503811 DNMT1P26358 1616 aaKnown RBP28.12■■■□□ 2.09
MATR3-206ENST00000503811 KIAA0556O60303 1618 aa28.12■■■□□ 2.09
MATR3-206ENST00000503811 FAM9BQ8IZU0 186 aa28.11■■■□□ 2.09
MATR3-206ENST00000503811 KIF7Q2M1P5 1343 aa28.08■■■□□ 2.08
MATR3-206ENST00000503811 KIAA0586Q9BVV6 1533 aa28.07■■■□□ 2.08
MATR3-206ENST00000503811 SPATA31E1Q6ZUB1 1445 aa28.06■■■□□ 2.08
MATR3-206ENST00000503811 MRS2Q9HD23 443 aa28.06■■■□□ 2.08
MATR3-206ENST00000503811 PRG4Q92954 1404 aaPredicted RBP28.04■■■□□ 2.08
MATR3-206ENST00000503811 RAPGEF6Q8TEU7 1601 aa28.02■■■□□ 2.08
MATR3-206ENST00000503811 PZPP20742 1482 aa28.01■■■□□ 2.07
MATR3-206ENST00000503811 IFT140Q96RY7 1462 aa27.99■■■□□ 2.07
MATR3-206ENST00000503811 CAMSAP2Q08AD1 1489 aa27.97■■■□□ 2.07
MATR3-206ENST00000503811 GRIN2AQ12879 1464 aa27.97■■■□□ 2.07
MATR3-206ENST00000503811 CNGB1Q14028 1251 aaPredicted RBP27.96■■■□□ 2.07
MATR3-206ENST00000503811 CFDP1Q9UEE9 299 aaPredicted RBP27.96■■■□□ 2.07
MATR3-206ENST00000503811 ZNF777Q9ULD5 760 aaPredicted RBP27.96■■■□□ 2.07
MATR3-206ENST00000503811 CDK11AQ9UQ88 783 aaPredicted RBP27.96■■■□□ 2.07
MATR3-206ENST00000503811 MSH5O43196 834 aa27.95■■■□□ 2.06
MATR3-206ENST00000503811 PLB1Q6P1J6 1458 aa27.95■■■□□ 2.06
MATR3-206ENST00000503811 ZNF326Q5BKZ1 582 aaKnown RBP27.93■■■□□ 2.06
MATR3-206ENST00000503811 TROQ12816 1431 aaPredicted RBP27.93■■■□□ 2.06
MATR3-206ENST00000503811 ZBED9Q6R2W3 1325 aa27.91■■■□□ 2.06
MATR3-206ENST00000503811 GPATCH8Q9UKJ3 1502 aaKnown RBP27.9■■■□□ 2.06
MATR3-206ENST00000503811 KIF14Q15058 1648 aa27.9■■■□□ 2.06
MATR3-206ENST00000503811 EIF4G3O43432 1585 aaKnown RBP27.89■■■□□ 2.06
MATR3-206ENST00000503811 POLR3GLQ9BT43 218 aa27.88■■■□□ 2.05
MATR3-206ENST00000503811 MBD5Q9P267 1494 aa27.87■■■□□ 2.05
MATR3-206ENST00000503811 PKD2Q13563 968 aa27.86■■■□□ 2.05
MATR3-206ENST00000503811 PPP4R2Q9NY27 417 aa27.85■■■□□ 2.05
MATR3-206ENST00000503811 POLR1AO95602 1720 aaPredicted RBP27.85■■■□□ 2.05
MATR3-206ENST00000503811 DHX29Q7Z478 1369 aaKnown RBP27.85■■■□□ 2.05
MATR3-206ENST00000503811 USP47Q96K76 1375 aa27.84■■■□□ 2.05
MATR3-206ENST00000503811 KIAA1107Q9UPP5 1409 aa27.84■■■□□ 2.05
MATR3-206ENST00000503811 B4GALNT3Q6L9W6 998 aa27.84■■■□□ 2.05
MATR3-206ENST00000503811 BCORL1Q5H9F3 1711 aa27.83■■■□□ 2.05
MATR3-206ENST00000503811 CEP170Q5SW79 1584 aa27.81■■■□□ 2.04
MATR3-206ENST00000503811 SENP3-EIF4A1A0A087X0R7 540 aa27.81■■■□□ 2.04
MATR3-206ENST00000503811 FBLN2P98095 1184 aa27.81■■■□□ 2.04
MATR3-206ENST00000503811 ERICH6BQ5W0A0 696 aa27.8■■■□□ 2.04
MATR3-206ENST00000503811 CHMP7Q8WUX9 453 aaPredicted RBP27.8■■■□□ 2.04
MATR3-206ENST00000503811 ADGBQ8N7X0 1667 aa27.79■■■□□ 2.04
MATR3-206ENST00000503811 ADGRL2O95490 1459 aa27.79■■■□□ 2.04
MATR3-206ENST00000503811 ITSN2Q9NZM3 1697 aa27.78■■■□□ 2.04
MATR3-206ENST00000503811 ANKRD50Q9ULJ7 1429 aa27.76■■■□□ 2.03
MATR3-206ENST00000503811 CROCC2H7BZ55 1655 aa27.76■■■□□ 2.03
MATR3-206ENST00000503811 ANKRD30AQ9BXX3 1397 aa27.75■■■□□ 2.03
MATR3-206ENST00000503811 FANCIQ9NVI1 1328 aa27.74■■■□□ 2.03
MATR3-206ENST00000503811 ADCY10Q96PN6 1610 aa27.73■■■□□ 2.03
MATR3-206ENST00000503811 KDM5CP41229 1560 aa27.71■■■□□ 2.03
MATR3-206ENST00000503811 JPH4Q96JJ6 628 aa27.7■■■□□ 2.02
MATR3-206ENST00000503811 NUP155O75694 1391 aa27.7■■■□□ 2.02
MATR3-206ENST00000503811 MAGI1Q96QZ7 1491 aaPredicted RBP27.69■■■□□ 2.02
MATR3-206ENST00000503811 SYNJ2O15056 1496 aa27.68■■■□□ 2.02
MATR3-206ENST00000503811 C9orf84Q5VXU9 1444 aa27.65■■■□□ 2.02
MATR3-206ENST00000503811 KDM2AQ9Y2K7 1162 aa27.64■■■□□ 2.02
MATR3-206ENST00000503811 SMG6Q86US8 1419 aaKnown RBP27.64■■■□□ 2.01
MATR3-206ENST00000503811 CARD11Q9BXL7 1154 aa27.64■■■□□ 2.01
MATR3-206ENST00000503811 CARMIL2Q6F5E8 1435 aa27.63■■■□□ 2.01
MATR3-206ENST00000503811 CDC42BPAQ5VT25 1732 aa27.63■■■□□ 2.01
MATR3-206ENST00000503811 PLEKHD1A6NEE1 506 aa27.62■■■□□ 2.01
MATR3-206ENST00000503811 ABCC10Q5T3U5 1492 aa27.62■■■□□ 2.01
MATR3-206ENST00000503811 UHRF1BP1Q6BDS2 1440 aa27.61■■■□□ 2.01
MATR3-206ENST00000503811 RALGAPBQ86X10 1494 aa27.61■■■□□ 2.01
MATR3-206ENST00000503811 ERCC6Q03468 1493 aa27.6■■■□□ 2.01
MATR3-206ENST00000503811 ATP10BO94823 1461 aa27.59■■■□□ 2.01
MATR3-206ENST00000503811 NUP160Q12769 1436 aa27.59■■■□□ 2.01
MATR3-206ENST00000503811 NUDCQ9Y266 331 aa27.59■■■□□ 2.01
MATR3-206ENST00000503811 ST20-MTHFSA0A0A6YYL1 179 aa27.59■■■□□ 2.01
MATR3-206ENST00000503811 HNRNPMP52272 730 aaKnown RBP eCLIP27.59■■■□□ 2.014e-9■■■■■ 28.9
MATR3-206ENST00000503811 PNISRQ8TF01 805 aaKnown RBP27.59■■■□□ 2.01
MATR3-206ENST00000503811 ARID4BQ4LE39 1312 aaPredicted RBP27.56■■■□□ 2
MATR3-206ENST00000503811 DCAF11Q8TEB1 546 aa27.56■■■□□ 2
MATR3-206ENST00000503811 SHANK2Q9UPX8 1470 aa27.55■■■□□ 2
MATR3-206ENST00000503811 ABCA8O94911 1581 aa27.55■■■□□ 2
MATR3-206ENST00000503811 KIF15Q9NS87 1388 aa27.54■■■□□ 2
MATR3-206ENST00000503811 TMC1Q8TDI8 760 aa27.54■■■□□ 2
MATR3-206ENST00000503811 TSPY4P0CV99 314 aa27.54■■■□□ 2
MATR3-206ENST00000503811 TSPY10P0CW01 314 aa27.54■■■□□ 2
MATR3-206ENST00000503811 ARHGEF12Q9NZN5 1544 aa27.51■■□□□ 1.99
MATR3-206ENST00000503811 RNF123Q5XPI4 1314 aa27.51■■□□□ 1.99
MATR3-206ENST00000503811 ROCK2O75116 1388 aaKnown RBP27.49■■□□□ 1.99
MATR3-206ENST00000503811 KDM5DQ9BY66 1539 aa27.49■■□□□ 1.99
MATR3-206ENST00000503811 ERICH6Q7L0X2 663 aa27.48■■□□□ 1.99
MATR3-206ENST00000503811 PTPRGP23470 1445 aa27.47■■□□□ 1.99
MATR3-206ENST00000503811 CCDC136Q96JN2 1154 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms