RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 CDK13Q14004 1512 aaKnown RBP33.84■■■■□ 3.01
DDX41-202ENST00000503078 IRX6P78412 446 aaPredicted RBP33.83■■■■□ 3.01
DDX41-202ENST00000503078 CCDC7Q96M83 1385 aa33.82■■■■□ 3
DDX41-202ENST00000503078 CDK11AQ9UQ88 783 aaPredicted RBP33.8■■■■□ 3
DDX41-202ENST00000503078 CCDC184Q52MB2 194 aa33.78■■■■□ 3
DDX41-202ENST00000503078 PRKRIP1Q9H875 184 aaPredicted RBP33.78■■■■□ 3
DDX41-202ENST00000503078 C11orf95C9JLR9 678 aaPredicted RBP33.78■■■■□ 3
DDX41-202ENST00000503078 RPRD2Q5VT52 1461 aaKnown RBP33.77■■■■□ 3
DDX41-202ENST00000503078 FOXD1Q16676 465 aa33.76■■■■□ 3
DDX41-202ENST00000503078 ROCK1Q13464 1354 aa33.76■■■■□ 3
DDX41-202ENST00000503078 ANKRD30BQ9BXX2 1392 aa33.76■■■□□ 2.99
DDX41-202ENST00000503078 KIAA0586Q9BVV6 1533 aa33.74■■■□□ 2.99
DDX41-202ENST00000503078 FANCIQ9NVI1 1328 aa33.73■■■□□ 2.99
DDX41-202ENST00000503078 GRIN2AQ12879 1464 aa33.73■■■□□ 2.99
DDX41-202ENST00000503078 DAPK1P53355 1430 aa33.73■■■□□ 2.99
DDX41-202ENST00000503078 TEX14Q8IWB6 1497 aa33.71■■■□□ 2.99
DDX41-202ENST00000503078 MSH5O43196 834 aa33.71■■■□□ 2.99
DDX41-202ENST00000503078 PPP4R2Q9NY27 417 aa33.7■■■□□ 2.98
DDX41-202ENST00000503078 NBPF8Q3BBV2 869 aa33.69■■■□□ 2.98
DDX41-202ENST00000503078 DNMT1P26358 1616 aaKnown RBP33.68■■■□□ 2.98
DDX41-202ENST00000503078 MAGI1Q96QZ7 1491 aaPredicted RBP33.68■■■□□ 2.98
DDX41-202ENST00000503078 MRS2Q9HD23 443 aa33.67■■■□□ 2.98
DDX41-202ENST00000503078 POLR1AO95602 1720 aaPredicted RBP33.67■■■□□ 2.98
DDX41-202ENST00000503078 ZBED9Q6R2W3 1325 aa33.66■■■□□ 2.98
DDX41-202ENST00000503078 FAM9BQ8IZU0 186 aa33.66■■■□□ 2.98
DDX41-202ENST00000503078 ARID3CA6NKF2 412 aa33.65■■■□□ 2.98
DDX41-202ENST00000503078 ABCC5O15440 1437 aa33.65■■■□□ 2.98
DDX41-202ENST00000503078 SPATA31E1Q6ZUB1 1445 aa33.65■■■□□ 2.98
DDX41-202ENST00000503078 DISP1Q96F81 1524 aa33.62■■■□□ 2.97
DDX41-202ENST00000503078 KIAA0556O60303 1618 aa33.61■■■□□ 2.97
DDX41-202ENST00000503078 KIF7Q2M1P5 1343 aa33.6■■■□□ 2.97
DDX41-202ENST00000503078 SYNJ2O15056 1496 aa33.58■■■□□ 2.97
DDX41-202ENST00000503078 SLC4A1APQ9BWU0 796 aaKnown RBP33.57■■■□□ 2.97
DDX41-202ENST00000503078 ZNF644Q9H582 1327 aaPredicted RBP33.52■■■□□ 2.96
DDX41-202ENST00000503078 CEP170Q5SW79 1584 aa33.52■■■□□ 2.96
DDX41-202ENST00000503078 CHMP7Q8WUX9 453 aaPredicted RBP33.52■■■□□ 2.96
DDX41-202ENST00000503078 NUP153P49790 1475 aaKnown RBP33.49■■■□□ 2.95
DDX41-202ENST00000503078 PZPP20742 1482 aa33.46■■■□□ 2.95
DDX41-202ENST00000503078 BCL11AQ9H165 835 aa33.46■■■□□ 2.95
DDX41-202ENST00000503078 RAPGEF6Q8TEU7 1601 aa33.45■■■□□ 2.95
DDX41-202ENST00000503078 B4GALNT3Q6L9W6 998 aa33.42■■■□□ 2.94
DDX41-202ENST00000503078 ERICH6Q7L0X2 663 aa33.42■■■□□ 2.94
DDX41-202ENST00000503078 NUP160Q12769 1436 aa33.42■■■□□ 2.94
DDX41-202ENST00000503078 MBD5Q9P267 1494 aa33.42■■■□□ 2.94
DDX41-202ENST00000503078 DHX29Q7Z478 1369 aaKnown RBP33.38■■■□□ 2.93
DDX41-202ENST00000503078 FBLN2P98095 1184 aa33.38■■■□□ 2.93
DDX41-202ENST00000503078 ADGBQ8N7X0 1667 aa33.37■■■□□ 2.93
DDX41-202ENST00000503078 CAMSAP2Q08AD1 1489 aa33.37■■■□□ 2.93
DDX41-202ENST00000503078 SMG6Q86US8 1419 aaKnown RBP33.36■■■□□ 2.93
DDX41-202ENST00000503078 KIAA1107Q9UPP5 1409 aa33.34■■■□□ 2.93
DDX41-202ENST00000503078 ITSN2Q9NZM3 1697 aa33.33■■■□□ 2.93
DDX41-202ENST00000503078 TROQ12816 1431 aaPredicted RBP33.33■■■□□ 2.93
DDX41-202ENST00000503078 BCORL1Q5H9F3 1711 aa33.32■■■□□ 2.93
DDX41-202ENST00000503078 USP47Q96K76 1375 aa33.32■■■□□ 2.92
DDX41-202ENST00000503078 KIF14Q15058 1648 aa33.31■■■□□ 2.92
DDX41-202ENST00000503078 CFDP1Q9UEE9 299 aaPredicted RBP33.3■■■□□ 2.92
DDX41-202ENST00000503078 ADGRL2O95490 1459 aa33.3■■■□□ 2.92
DDX41-202ENST00000503078 PRG4Q92954 1404 aaPredicted RBP33.3■■■□□ 2.92
DDX41-202ENST00000503078 ARID4BQ4LE39 1312 aaPredicted RBP33.29■■■□□ 2.92
DDX41-202ENST00000503078 JPH4Q96JJ6 628 aa33.27■■■□□ 2.92
DDX41-202ENST00000503078 CROCC2H7BZ55 1655 aa33.26■■■□□ 2.92
DDX41-202ENST00000503078 KDM5CP41229 1560 aa33.26■■■□□ 2.92
DDX41-202ENST00000503078 GPATCH8Q9UKJ3 1502 aaKnown RBP33.25■■■□□ 2.91
DDX41-202ENST00000503078 CARMIL2Q6F5E8 1435 aa33.25■■■□□ 2.91
DDX41-202ENST00000503078 NUDCQ9Y266 331 aa33.25■■■□□ 2.91
DDX41-202ENST00000503078 ADCY10Q96PN6 1610 aa33.22■■■□□ 2.91
DDX41-202ENST00000503078 PKD2Q13563 968 aa33.22■■■□□ 2.91
DDX41-202ENST00000503078 PLB1Q6P1J6 1458 aa33.22■■■□□ 2.91
DDX41-202ENST00000503078 RNF123Q5XPI4 1314 aa33.21■■■□□ 2.91
DDX41-202ENST00000503078 ZNF326Q5BKZ1 582 aaKnown RBP33.21■■■□□ 2.91
DDX41-202ENST00000503078 POLR3GLQ9BT43 218 aa33.2■■■□□ 2.91
DDX41-202ENST00000503078 ANKRD30AQ9BXX3 1397 aa33.19■■■□□ 2.9
DDX41-202ENST00000503078 ROCK2O75116 1388 aaKnown RBP33.17■■■□□ 2.9
DDX41-202ENST00000503078 UHRF1BP1Q6BDS2 1440 aa33.17■■■□□ 2.9
DDX41-202ENST00000503078 CNGB1Q14028 1251 aaPredicted RBP33.16■■■□□ 2.9
DDX41-202ENST00000503078 ZNF777Q9ULD5 760 aaPredicted RBP33.16■■■□□ 2.9
DDX41-202ENST00000503078 RALGAPBQ86X10 1494 aa33.15■■■□□ 2.9
DDX41-202ENST00000503078 ANKRD50Q9ULJ7 1429 aa33.13■■■□□ 2.89
DDX41-202ENST00000503078 PNISRQ8TF01 805 aaKnown RBP33.12■■■□□ 2.89
DDX41-202ENST00000503078 MYT1LQ9UL68 1186 aa33.1■■■□□ 2.89
DDX41-202ENST00000503078 ARHGEF12Q9NZN5 1544 aa33.08■■■□□ 2.89
DDX41-202ENST00000503078 CCDC136Q96JN2 1154 aa33.06■■■□□ 2.88
DDX41-202ENST00000503078 TMC1Q8TDI8 760 aa33.06■■■□□ 2.88
DDX41-202ENST00000503078 ABCA8O94911 1581 aa33.05■■■□□ 2.88
DDX41-202ENST00000503078 KIF15Q9NS87 1388 aa33.04■■■□□ 2.88
DDX41-202ENST00000503078 CARD11Q9BXL7 1154 aa33.04■■■□□ 2.88
DDX41-202ENST00000503078 SHANK2Q9UPX8 1470 aa33.03■■■□□ 2.88
DDX41-202ENST00000503078 NUP155O75694 1391 aa33.02■■■□□ 2.88
DDX41-202ENST00000503078 NOP58Q9Y2X3 529 aaKnown RBP33.01■■■□□ 2.87
DDX41-202ENST00000503078 KDM5DQ9BY66 1539 aa32.99■■■□□ 2.87
DDX41-202ENST00000503078 CDC42BPAQ5VT25 1732 aa32.99■■■□□ 2.87
DDX41-202ENST00000503078 LRPPRCP42704 1394 aaKnown RBP32.99■■■□□ 2.87
DDX41-202ENST00000503078 KTN1Q86UP2 1357 aaKnown RBP32.98■■■□□ 2.87
DDX41-202ENST00000503078 C9orf84Q5VXU9 1444 aa32.97■■■□□ 2.87
DDX41-202ENST00000503078 BRD4O60885 1362 aaPredicted RBP32.96■■■□□ 2.87
DDX41-202ENST00000503078 CHD1O14646 1710 aa32.96■■■□□ 2.87
DDX41-202ENST00000503078 MYBBP1AQ9BQG0 1328 aaKnown RBP32.94■■■□□ 2.86
DDX41-202ENST00000503078 ST20-MTHFSA0A0A6YYL1 179 aa32.92■■■□□ 2.86
DDX41-202ENST00000503078 RALBP1Q15311 655 aa32.92■■■□□ 2.86
DDX41-202ENST00000503078 ATP10BO94823 1461 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms