RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 CCDC7Q96M83 1385 aa25.73■■□□□ 1.71
SCARB2-203ENST00000502908 PRKRIP1Q9H875 184 aaPredicted RBP25.73■■□□□ 1.71
SCARB2-203ENST00000502908 AKNAQ7Z591 1439 aa25.72■■□□□ 1.71
SCARB2-203ENST00000502908 MIA2Q96PC5 1412 aa25.72■■□□□ 1.71
SCARB2-203ENST00000502908 MRS2Q9HD23 443 aa25.72■■□□□ 1.71
SCARB2-203ENST00000502908 SLC4A1APQ9BWU0 796 aaKnown RBP25.7■■□□□ 1.71
SCARB2-203ENST00000502908 MSH5O43196 834 aa25.69■■□□□ 1.7
SCARB2-203ENST00000502908 DAPK1P53355 1430 aa25.69■■□□□ 1.7
SCARB2-203ENST00000502908 NCOA1Q15788 1441 aa25.69■■□□□ 1.7
SCARB2-203ENST00000502908 ADAMTS12P58397 1594 aa25.69■■□□□ 1.7
SCARB2-203ENST00000502908 ANKRD30BQ9BXX2 1392 aa25.68■■□□□ 1.7
SCARB2-203ENST00000502908 ABCC5O15440 1437 aa25.66■■□□□ 1.7
SCARB2-203ENST00000502908 CDK11AQ9UQ88 783 aaPredicted RBP25.65■■□□□ 1.7
SCARB2-203ENST00000502908 KIF7Q2M1P5 1343 aa25.65■■□□□ 1.7
SCARB2-203ENST00000502908 POLR3GLQ9BT43 218 aa25.64■■□□□ 1.7
SCARB2-203ENST00000502908 RPRD2Q5VT52 1461 aaKnown RBP25.64■■□□□ 1.7
SCARB2-203ENST00000502908 SENP3-EIF4A1A0A087X0R7 540 aa25.63■■□□□ 1.69
SCARB2-203ENST00000502908 ZNF326Q5BKZ1 582 aaKnown RBP25.63■■□□□ 1.69
SCARB2-203ENST00000502908 TEX14Q8IWB6 1497 aa25.62■■□□□ 1.69
SCARB2-203ENST00000502908 ZNF608Q9ULD9 1512 aaPredicted RBP25.6■■□□□ 1.69
SCARB2-203ENST00000502908 B4GALNT3Q6L9W6 998 aa25.59■■□□□ 1.69
SCARB2-203ENST00000502908 ZNF777Q9ULD5 760 aaPredicted RBP25.58■■□□□ 1.69
SCARB2-203ENST00000502908 DNMT1P26358 1616 aaKnown RBP25.57■■□□□ 1.68
SCARB2-203ENST00000502908 NUP153P49790 1475 aaKnown RBP25.56■■□□□ 1.68
SCARB2-203ENST00000502908 ROCK1Q13464 1354 aa25.56■■□□□ 1.68
SCARB2-203ENST00000502908 DISP1Q96F81 1524 aa25.54■■□□□ 1.68
SCARB2-203ENST00000502908 SPATA31E1Q6ZUB1 1445 aa25.54■■□□□ 1.68
SCARB2-203ENST00000502908 PPP4R2Q9NY27 417 aa25.53■■□□□ 1.68
SCARB2-203ENST00000502908 ZBED9Q6R2W3 1325 aa25.52■■□□□ 1.68
SCARB2-203ENST00000502908 PRG4Q92954 1404 aaPredicted RBP25.52■■□□□ 1.68
SCARB2-203ENST00000502908 KIAA0556O60303 1618 aa25.52■■□□□ 1.68
SCARB2-203ENST00000502908 CFDP1Q9UEE9 299 aaPredicted RBP25.5■■□□□ 1.67
SCARB2-203ENST00000502908 PZPP20742 1482 aa25.48■■□□□ 1.67
SCARB2-203ENST00000502908 MRC2Q9UBG0 1479 aa25.48■■□□□ 1.67
SCARB2-203ENST00000502908 RAPGEF6Q8TEU7 1601 aa25.47■■□□□ 1.67
SCARB2-203ENST00000502908 CAMSAP2Q08AD1 1489 aa25.45■■□□□ 1.66
SCARB2-203ENST00000502908 KIAA0586Q9BVV6 1533 aa25.44■■□□□ 1.66
SCARB2-203ENST00000502908 FANCIQ9NVI1 1328 aa25.44■■□□□ 1.66
SCARB2-203ENST00000502908 PKD2Q13563 968 aa25.44■■□□□ 1.66
SCARB2-203ENST00000502908 USP47Q96K76 1375 aa25.42■■□□□ 1.66
SCARB2-203ENST00000502908 POLR1AO95602 1720 aaPredicted RBP25.42■■□□□ 1.66
SCARB2-203ENST00000502908 PLB1Q6P1J6 1458 aa25.41■■□□□ 1.66
SCARB2-203ENST00000502908 BCORL1Q5H9F3 1711 aa25.41■■□□□ 1.66
SCARB2-203ENST00000502908 ERICH6BQ5W0A0 696 aa25.4■■□□□ 1.66
SCARB2-203ENST00000502908 DHX29Q7Z478 1369 aaKnown RBP25.39■■□□□ 1.66
SCARB2-203ENST00000502908 FBLN2P98095 1184 aa25.39■■□□□ 1.66
SCARB2-203ENST00000502908 ERICH6Q7L0X2 663 aa25.39■■□□□ 1.66
SCARB2-203ENST00000502908 KIF14Q15058 1648 aa25.39■■□□□ 1.65
SCARB2-203ENST00000502908 TROQ12816 1431 aaPredicted RBP25.37■■□□□ 1.65
SCARB2-203ENST00000502908 GRIN2AQ12879 1464 aa25.36■■□□□ 1.65
SCARB2-203ENST00000502908 GPATCH8Q9UKJ3 1502 aaKnown RBP25.36■■□□□ 1.65
SCARB2-203ENST00000502908 BCL11AQ9H165 835 aa25.35■■□□□ 1.65
SCARB2-203ENST00000502908 KIAA1107Q9UPP5 1409 aa25.35■■□□□ 1.65
SCARB2-203ENST00000502908 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
SCARB2-203ENST00000502908 MBD5Q9P267 1494 aa25.34■■□□□ 1.65
SCARB2-203ENST00000502908 KDM2AQ9Y2K7 1162 aa25.33■■□□□ 1.64
SCARB2-203ENST00000502908 ADGBQ8N7X0 1667 aa25.3■■□□□ 1.64
SCARB2-203ENST00000502908 CHMP7Q8WUX9 453 aaPredicted RBP25.3■■□□□ 1.64
SCARB2-203ENST00000502908 EIF4G3O43432 1585 aaKnown RBP25.3■■□□□ 1.64
SCARB2-203ENST00000502908 ITSN2Q9NZM3 1697 aa25.28■■□□□ 1.64
SCARB2-203ENST00000502908 ANKRD50Q9ULJ7 1429 aa25.27■■□□□ 1.64
SCARB2-203ENST00000502908 CARD11Q9BXL7 1154 aa25.27■■□□□ 1.64
SCARB2-203ENST00000502908 ANKRD30AQ9BXX3 1397 aa25.27■■□□□ 1.64
SCARB2-203ENST00000502908 KDM5CP41229 1560 aa25.26■■□□□ 1.63
SCARB2-203ENST00000502908 NUP155O75694 1391 aa25.26■■□□□ 1.63
SCARB2-203ENST00000502908 NUDCQ9Y266 331 aa25.26■■□□□ 1.63
SCARB2-203ENST00000502908 SMG6Q86US8 1419 aaKnown RBP25.25■■□□□ 1.63
SCARB2-203ENST00000502908 TMC1Q8TDI8 760 aa25.24■■□□□ 1.63
SCARB2-203ENST00000502908 CROCC2H7BZ55 1655 aa25.24■■□□□ 1.63
SCARB2-203ENST00000502908 CEP170Q5SW79 1584 aa25.23■■□□□ 1.63
SCARB2-203ENST00000502908 ADGRL2O95490 1459 aa25.22■■□□□ 1.63
SCARB2-203ENST00000502908 ST20-MTHFSA0A0A6YYL1 179 aa25.21■■□□□ 1.63
SCARB2-203ENST00000502908 PNISRQ8TF01 805 aaKnown RBP25.21■■□□□ 1.63
SCARB2-203ENST00000502908 CCDC136Q96JN2 1154 aa25.19■■□□□ 1.62
SCARB2-203ENST00000502908 DCAF11Q8TEB1 546 aa25.19■■□□□ 1.62
SCARB2-203ENST00000502908 JPH4Q96JJ6 628 aa25.18■■□□□ 1.62
SCARB2-203ENST00000502908 SALL2Q9Y467 1007 aaPredicted RBP25.18■■□□□ 1.62
SCARB2-203ENST00000502908 HNRNPMP52272 730 aaKnown RBP eCLIP25.16■■□□□ 1.62
SCARB2-203ENST00000502908 PLEKHD1A6NEE1 506 aa25.16■■□□□ 1.62
SCARB2-203ENST00000502908 C9orf84Q5VXU9 1444 aa25.16■■□□□ 1.62
SCARB2-203ENST00000502908 ADCY10Q96PN6 1610 aa25.15■■□□□ 1.62
SCARB2-203ENST00000502908 RALGAPBQ86X10 1494 aa25.14■■□□□ 1.61
SCARB2-203ENST00000502908 CDC42BPAQ5VT25 1732 aa25.14■■□□□ 1.61
SCARB2-203ENST00000502908 TSPY4P0CV99 314 aa25.11■■□□□ 1.61
SCARB2-203ENST00000502908 TSPY10P0CW01 314 aa25.11■■□□□ 1.61
SCARB2-203ENST00000502908 UHRF1BP1Q6BDS2 1440 aa25.1■■□□□ 1.61
SCARB2-203ENST00000502908 CARMIL2Q6F5E8 1435 aa25.1■■□□□ 1.61
SCARB2-203ENST00000502908 RNF123Q5XPI4 1314 aa25.1■■□□□ 1.61
SCARB2-203ENST00000502908 PAK3O75914 559 aaPredicted RBP25.09■■□□□ 1.61
SCARB2-203ENST00000502908 ARID4BQ4LE39 1312 aaPredicted RBP25.09■■□□□ 1.61
SCARB2-203ENST00000502908 KIF15Q9NS87 1388 aa25.09■■□□□ 1.61
SCARB2-203ENST00000502908 SYNJ2O15056 1496 aa25.08■■□□□ 1.61
SCARB2-203ENST00000502908 MAGI1Q96QZ7 1491 aaPredicted RBP25.07■■□□□ 1.6
SCARB2-203ENST00000502908 RGL3Q3MIN7 710 aa25.06■■□□□ 1.6
SCARB2-203ENST00000502908 ROCK2O75116 1388 aaKnown RBP25.06■■□□□ 1.6
SCARB2-203ENST00000502908 ATP10BO94823 1461 aa25.06■■□□□ 1.6
SCARB2-203ENST00000502908 ERCC6Q03468 1493 aa25.06■■□□□ 1.6
SCARB2-203ENST00000502908 NBR1Q14596 966 aa25.05■■□□□ 1.6
SCARB2-203ENST00000502908 ABCC10Q5T3U5 1492 aa25.05■■□□□ 1.6
SCARB2-203ENST00000502908 NOP58Q9Y2X3 529 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms