RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 NUP153P49790 1475 aaKnown RBP18.44■□□□□ 0.54
UBE2D3-211ENST00000502404 RAPGEF3O95398 923 aa18.43■□□□□ 0.54
UBE2D3-211ENST00000502404 ZNF219Q9P2Y4 722 aaPredicted RBP18.43■□□□□ 0.54
UBE2D3-211ENST00000502404 EFCAB5A4FU69 1503 aa18.4■□□□□ 0.54
UBE2D3-211ENST00000502404 UBTFP17480 764 aaKnown RBP18.4■□□□□ 0.54
UBE2D3-211ENST00000502404 CAPN15O75808 1086 aa18.39■□□□□ 0.53
UBE2D3-211ENST00000502404 ARID4BQ4LE39 1312 aaPredicted RBP18.39■□□□□ 0.53
UBE2D3-211ENST00000502404 HECW2Q9P2P5 1572 aa18.38■□□□□ 0.53
UBE2D3-211ENST00000502404 KIF21BO75037 1637 aa18.38■□□□□ 0.53
UBE2D3-211ENST00000502404 ILDR1Q86SU0 546 aaPredicted RBP18.35■□□□□ 0.53
UBE2D3-211ENST00000502404 DENND4BO75064 1496 aaPredicted RBP18.34■□□□□ 0.53
UBE2D3-211ENST00000502404 CDK11AQ9UQ88 783 aaPredicted RBP18.34■□□□□ 0.53
UBE2D3-211ENST00000502404 AKNAQ7Z591 1439 aa18.33■□□□□ 0.53
UBE2D3-211ENST00000502404 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.52
UBE2D3-211ENST00000502404 FANCAO15360 1455 aa18.32■□□□□ 0.52
UBE2D3-211ENST00000502404 FMN1Q68DA7 1419 aa18.31■□□□□ 0.52
UBE2D3-211ENST00000502404 CFAP74Q9C0B2 1584 aa18.3■□□□□ 0.52
UBE2D3-211ENST00000502404 PTPRMP28827 1452 aa18.28■□□□□ 0.52
UBE2D3-211ENST00000502404 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.28■□□□□ 0.52
UBE2D3-211ENST00000502404 POGZQ7Z3K3 1410 aa18.27■□□□□ 0.52
UBE2D3-211ENST00000502404 ADAMTSL3P82987 1691 aa18.26■□□□□ 0.51
UBE2D3-211ENST00000502404 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
UBE2D3-211ENST00000502404 EFCAB2Q5VUJ9 269 aa18.25■□□□□ 0.51
UBE2D3-211ENST00000502404 FRMPD1Q5SYB0 1578 aa18.25■□□□□ 0.51
UBE2D3-211ENST00000502404 PLCH2O75038 1416 aa18.23■□□□□ 0.51
UBE2D3-211ENST00000502404 MAGI2Q86UL8 1455 aa18.23■□□□□ 0.51
UBE2D3-211ENST00000502404 CDK13Q14004 1512 aaKnown RBP18.23■□□□□ 0.51
UBE2D3-211ENST00000502404 BCORL1Q5H9F3 1711 aa18.21■□□□□ 0.51
UBE2D3-211ENST00000502404 ARHGEF40Q8TER5 1519 aa18.21■□□□□ 0.51
UBE2D3-211ENST00000502404 SCAPERQ9BY12 1400 aa18.21■□□□□ 0.51
UBE2D3-211ENST00000502404 HECW1Q76N89 1606 aa18.2■□□□□ 0.5
UBE2D3-211ENST00000502404 TTC37Q6PGP7 1564 aa18.2■□□□□ 0.5
UBE2D3-211ENST00000502404 RICTORQ6R327 1708 aa18.2■□□□□ 0.5
UBE2D3-211ENST00000502404 ARHGAP35Q9NRY4 1499 aa18.19■□□□□ 0.5
UBE2D3-211ENST00000502404 ZMYM4Q5VZL5 1548 aa18.18■□□□□ 0.5
UBE2D3-211ENST00000502404 CLIP1P30622 1438 aa18.18■□□□□ 0.5
UBE2D3-211ENST00000502404 ZFYVE16Q7Z3T8 1539 aa18.18■□□□□ 0.5
UBE2D3-211ENST00000502404 MADDQ8WXG6 1647 aa18.16■□□□□ 0.5
UBE2D3-211ENST00000502404 TROQ12816 1431 aaPredicted RBP18.15■□□□□ 0.5
UBE2D3-211ENST00000502404 YEATS2Q9ULM3 1422 aa18.15■□□□□ 0.5
UBE2D3-211ENST00000502404 MLECQ14165 292 aa18.14■□□□□ 0.49
UBE2D3-211ENST00000502404 MYT1LQ9UL68 1186 aa18.13■□□□□ 0.49
UBE2D3-211ENST00000502404 POLA2Q14181 598 aa18.12■□□□□ 0.49
UBE2D3-211ENST00000502404 ATP10AO60312 1499 aa18.12■□□□□ 0.49
UBE2D3-211ENST00000502404 PCF11O94913 1555 aaKnown RBP18.12■□□□□ 0.49
UBE2D3-211ENST00000502404 DSG3P32926 999 aa18.11■□□□□ 0.49
UBE2D3-211ENST00000502404 FBXO41Q8TF61 875 aa18.11■□□□□ 0.49
UBE2D3-211ENST00000502404 KIF14Q15058 1648 aa18.11■□□□□ 0.49
UBE2D3-211ENST00000502404 MYO5CQ9NQX4 1742 aa18.09■□□□□ 0.49
UBE2D3-211ENST00000502404 RIMS1Q86UR5 1692 aaKnown RBP18.09■□□□□ 0.49
UBE2D3-211ENST00000502404 ARHGAP5Q13017 1502 aa18.08■□□□□ 0.49
UBE2D3-211ENST00000502404 ZNF518AQ6AHZ1 1483 aa18.08■□□□□ 0.49
UBE2D3-211ENST00000502404 C9orf84Q5VXU9 1444 aa18.08■□□□□ 0.49
UBE2D3-211ENST00000502404 LMTK3Q96Q04 1460 aa18.07■□□□□ 0.48
UBE2D3-211ENST00000502404 AFAP1Q8N556 730 aa18.07■□□□□ 0.48
UBE2D3-211ENST00000502404 ABCB7O75027 752 aa18.06■□□□□ 0.48
UBE2D3-211ENST00000502404 CCDC18Q5T9S5 1454 aa18.06■□□□□ 0.48
UBE2D3-211ENST00000502404 CASKIN1Q8WXD9 1431 aa18.06■□□□□ 0.48
UBE2D3-211ENST00000502404 HSPA2P54652 639 aa18.03■□□□□ 0.48
UBE2D3-211ENST00000502404 ESF1Q9H501 851 aaKnown RBP18.02■□□□□ 0.48
UBE2D3-211ENST00000502404 ARHGEF12Q9NZN5 1544 aa18■□□□□ 0.47
UBE2D3-211ENST00000502404 FER1L4A9Z1Z3 1794 aa17.99■□□□□ 0.47
UBE2D3-211ENST00000502404 MLH3Q9UHC1 1453 aa17.98■□□□□ 0.47
UBE2D3-211ENST00000502404 KDM5CP41229 1560 aa17.98■□□□□ 0.47
UBE2D3-211ENST00000502404 FYCO1Q9BQS8 1478 aa17.96■□□□□ 0.47
UBE2D3-211ENST00000502404 SIGLEC1Q9BZZ2 1709 aa17.96■□□□□ 0.47
UBE2D3-211ENST00000502404 CEBPAP49715 358 aaPredicted RBP17.95■□□□□ 0.46
UBE2D3-211ENST00000502404 ZNF777Q9ULD5 760 aaPredicted RBP17.94■□□□□ 0.46
UBE2D3-211ENST00000502404 CDC42BPBQ9Y5S2 1711 aa17.93■□□□□ 0.46
UBE2D3-211ENST00000502404 LRRIQ1Q96JM4 1722 aa17.92■□□□□ 0.46
UBE2D3-211ENST00000502404 REREQ9P2R6 1566 aa17.92■□□□□ 0.46
UBE2D3-211ENST00000502404 TRAPPC8Q9Y2L5 1435 aa17.92■□□□□ 0.46
UBE2D3-211ENST00000502404 PREX2Q70Z35 1606 aa17.92■□□□□ 0.46
UBE2D3-211ENST00000502404 ABCC1P33527 1531 aa17.91■□□□□ 0.46
UBE2D3-211ENST00000502404 DIP2CQ9Y2E4 1556 aa17.91■□□□□ 0.46
UBE2D3-211ENST00000502404 UHRF1BP1Q6BDS2 1440 aa17.9■□□□□ 0.46
UBE2D3-211ENST00000502404 AGLP35573 1532 aa17.9■□□□□ 0.46
UBE2D3-211ENST00000502404 MKRN4PQ13434 485 aaPredicted RBP17.9■□□□□ 0.46
UBE2D3-211ENST00000502404 CERKQ8TCT0 537 aa17.9■□□□□ 0.46
UBE2D3-211ENST00000502404 CFDP1Q9UEE9 299 aaPredicted RBP17.9■□□□□ 0.46
UBE2D3-211ENST00000502404 ZBTB12Q9Y330 459 aaPredicted RBP17.9■□□□□ 0.46
UBE2D3-211ENST00000502404 SETD1BQ9UPS6 1966 aaKnown RBP17.9■□□□□ 0.46
UBE2D3-211ENST00000502404 SPAG9O60271 1321 aaKnown RBP17.89■□□□□ 0.45
UBE2D3-211ENST00000502404 CNTLNQ9NXG0 1405 aa17.88■□□□□ 0.45
UBE2D3-211ENST00000502404 PREX1Q8TCU6 1659 aa17.87■□□□□ 0.45
UBE2D3-211ENST00000502404 CCNB3Q8WWL7 1395 aa17.87■□□□□ 0.45
UBE2D3-211ENST00000502404 PLEKHH2Q8IVE3 1493 aa17.87■□□□□ 0.45
UBE2D3-211ENST00000502404 HNRNPMP52272 730 aaKnown RBP eCLIP17.86■□□□□ 0.454e-13■■■■■ 32.7
UBE2D3-211ENST00000502404 MTUS2Q5JR59 1369 aa17.86■□□□□ 0.45
UBE2D3-211ENST00000502404 GPATCH8Q9UKJ3 1502 aaKnown RBP17.86■□□□□ 0.45
UBE2D3-211ENST00000502404 ABCA6Q8N139 1617 aa17.85■□□□□ 0.45
UBE2D3-211ENST00000502404 ITSN2Q9NZM3 1697 aa17.85■□□□□ 0.45
UBE2D3-211ENST00000502404 KIAA1107Q9UPP5 1409 aa17.85■□□□□ 0.45
UBE2D3-211ENST00000502404 CDC42BPAQ5VT25 1732 aa17.84■□□□□ 0.45
UBE2D3-211ENST00000502404 SAMD9LQ8IVG5 1584 aa17.81■□□□□ 0.44
UBE2D3-211ENST00000502404 KIDINS220Q9ULH0 1771 aa17.81■□□□□ 0.44
UBE2D3-211ENST00000502404 SYCP2Q9BX26 1530 aa17.79■□□□□ 0.44
UBE2D3-211ENST00000502404 PTPRTO14522 1441 aa17.77■□□□□ 0.44
UBE2D3-211ENST00000502404 ZMYM3Q14202 1370 aa17.77■□□□□ 0.43
UBE2D3-211ENST00000502404 C3P01024 1663 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms