RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 HECW1Q76N89 1606 aa11.78□□□□□ -0.52
SH3RF1-202ENST00000502315 SCAPERQ9BY12 1400 aa11.77□□□□□ -0.52
SH3RF1-202ENST00000502315 RANGAP1P46060 587 aaPredicted RBP11.77□□□□□ -0.53
SH3RF1-202ENST00000502315 CLIP1P30622 1438 aa11.77□□□□□ -0.53
SH3RF1-202ENST00000502315 ATP10AO60312 1499 aa11.76□□□□□ -0.53
SH3RF1-202ENST00000502315 ZFYVE16Q7Z3T8 1539 aa11.76□□□□□ -0.53
SH3RF1-202ENST00000502315 PCF11O94913 1555 aaKnown RBP11.76□□□□□ -0.53
SH3RF1-202ENST00000502315 TROQ12816 1431 aaPredicted RBP11.76□□□□□ -0.53
SH3RF1-202ENST00000502315 ZNF518AQ6AHZ1 1483 aa11.75□□□□□ -0.53
SH3RF1-202ENST00000502315 ARHGAP35Q9NRY4 1499 aa11.75□□□□□ -0.53
SH3RF1-202ENST00000502315 TTC37Q6PGP7 1564 aa11.75□□□□□ -0.53
SH3RF1-202ENST00000502315 LMTK3Q96Q04 1460 aa11.74□□□□□ -0.53
SH3RF1-202ENST00000502315 MADDQ8WXG6 1647 aa11.74□□□□□ -0.53
SH3RF1-202ENST00000502315 CDK13Q14004 1512 aaKnown RBP11.73□□□□□ -0.53
SH3RF1-202ENST00000502315 C9orf84Q5VXU9 1444 aa11.73□□□□□ -0.53
SH3RF1-202ENST00000502315 CCDC18Q5T9S5 1454 aa11.72□□□□□ -0.53
SH3RF1-202ENST00000502315 KIF14Q15058 1648 aa11.71□□□□□ -0.53
SH3RF1-202ENST00000502315 YEATS2Q9ULM3 1422 aa11.71□□□□□ -0.53
SH3RF1-202ENST00000502315 ATP1B4Q9UN42 357 aaPredicted RBP11.71□□□□□ -0.53
SH3RF1-202ENST00000502315 DMRT2Q9Y5R5 561 aa11.71□□□□□ -0.53
SH3RF1-202ENST00000502315 MYO5CQ9NQX4 1742 aa11.71□□□□□ -0.54
SH3RF1-202ENST00000502315 CASKIN1Q8WXD9 1431 aa11.7□□□□□ -0.54
SH3RF1-202ENST00000502315 REREQ9P2R6 1566 aa11.7□□□□□ -0.54
SH3RF1-202ENST00000502315 ARHGEF12Q9NZN5 1544 aa11.7□□□□□ -0.54
SH3RF1-202ENST00000502315 MLH3Q9UHC1 1453 aa11.7□□□□□ -0.54
SH3RF1-202ENST00000502315 KDM5CP41229 1560 aa11.69□□□□□ -0.54
SH3RF1-202ENST00000502315 RIMS1Q86UR5 1692 aaKnown RBP11.68□□□□□ -0.54
SH3RF1-202ENST00000502315 SETD1BQ9UPS6 1966 aaKnown RBP11.67□□□□□ -0.54
SH3RF1-202ENST00000502315 AGLP35573 1532 aa11.66□□□□□ -0.54
SH3RF1-202ENST00000502315 ARHGAP5Q13017 1502 aa11.66□□□□□ -0.54
SH3RF1-202ENST00000502315 AFAP1Q8N556 730 aa11.65□□□□□ -0.54
SH3RF1-202ENST00000502315 FER1L4A9Z1Z3 1794 aa11.64□□□□□ -0.55
SH3RF1-202ENST00000502315 FYCO1Q9BQS8 1478 aa11.63□□□□□ -0.55
SH3RF1-202ENST00000502315 CNTLNQ9NXG0 1405 aa11.63□□□□□ -0.55
SH3RF1-202ENST00000502315 MLECQ14165 292 aa11.62□□□□□ -0.55
SH3RF1-202ENST00000502315 ESF1Q9H501 851 aaKnown RBP11.62□□□□□ -0.55
SH3RF1-202ENST00000502315 KIAA1107Q9UPP5 1409 aa11.61□□□□□ -0.55
SH3RF1-202ENST00000502315 CERKQ8TCT0 537 aa11.61□□□□□ -0.55
SH3RF1-202ENST00000502315 PLEKHH2Q8IVE3 1493 aa11.61□□□□□ -0.55
SH3RF1-202ENST00000502315 PREX1Q8TCU6 1659 aa11.61□□□□□ -0.55
SH3RF1-202ENST00000502315 UHRF1BP1Q6BDS2 1440 aa11.6□□□□□ -0.55
SH3RF1-202ENST00000502315 ABCC1P33527 1531 aa11.6□□□□□ -0.55
SH3RF1-202ENST00000502315 PREX2Q70Z35 1606 aa11.6□□□□□ -0.55
SH3RF1-202ENST00000502315 SIGLEC1Q9BZZ2 1709 aa11.6□□□□□ -0.55
SH3RF1-202ENST00000502315 CDC42BPBQ9Y5S2 1711 aa11.6□□□□□ -0.55
SH3RF1-202ENST00000502315 HSPA2P54652 639 aa11.6□□□□□ -0.55
SH3RF1-202ENST00000502315 MYT1LQ9UL68 1186 aa11.6□□□□□ -0.55
SH3RF1-202ENST00000502315 TRAPPC8Q9Y2L5 1435 aa11.6□□□□□ -0.55
SH3RF1-202ENST00000502315 DIP2CQ9Y2E4 1556 aa11.59□□□□□ -0.55
SH3RF1-202ENST00000502315 PTPRTO14522 1441 aa11.58□□□□□ -0.56
SH3RF1-202ENST00000502315 NPATQ14207 1427 aa11.58□□□□□ -0.56
SH3RF1-202ENST00000502315 GPATCH8Q9UKJ3 1502 aaKnown RBP11.56□□□□□ -0.56
SH3RF1-202ENST00000502315 RSPH4AQ5TD94 716 aa11.56□□□□□ -0.56
SH3RF1-202ENST00000502315 LRRIQ1Q96JM4 1722 aa11.56□□□□□ -0.56
SH3RF1-202ENST00000502315 SPAG9O60271 1321 aaKnown RBP11.56□□□□□ -0.56
SH3RF1-202ENST00000502315 CEBPAP49715 358 aaPredicted RBP11.55□□□□□ -0.56
SH3RF1-202ENST00000502315 MAPK8IP2Q13387 824 aaPredicted RBP11.55□□□□□ -0.56
SH3RF1-202ENST00000502315 CFDP1Q9UEE9 299 aaPredicted RBP11.55□□□□□ -0.56
SH3RF1-202ENST00000502315 ITSN2Q9NZM3 1697 aa11.55□□□□□ -0.56
SH3RF1-202ENST00000502315 EHMT2Q96KQ7 1210 aa11.54□□□□□ -0.56
SH3RF1-202ENST00000502315 CDC42BPAQ5VT25 1732 aa11.54□□□□□ -0.56
SH3RF1-202ENST00000502315 KIDINS220Q9ULH0 1771 aa11.54□□□□□ -0.56
SH3RF1-202ENST00000502315 ABCA6Q8N139 1617 aa11.53□□□□□ -0.56
SH3RF1-202ENST00000502315 IQSEC2Q5JU85 1478 aa11.53□□□□□ -0.56
SH3RF1-202ENST00000502315 SAMD9LQ8IVG5 1584 aa11.53□□□□□ -0.56
SH3RF1-202ENST00000502315 CCNB3Q8WWL7 1395 aa11.53□□□□□ -0.56
SH3RF1-202ENST00000502315 MROH2AA6NES4 1674 aa11.52□□□□□ -0.56
SH3RF1-202ENST00000502315 RTEL1-TNFRSF6BF6WH68 1400 aa11.52□□□□□ -0.56
SH3RF1-202ENST00000502315 ZMYM3Q14202 1370 aa11.52□□□□□ -0.57
SH3RF1-202ENST00000502315 MTUS2Q5JR59 1369 aa11.52□□□□□ -0.57
SH3RF1-202ENST00000502315 C3P01024 1663 aa11.51□□□□□ -0.57
SH3RF1-202ENST00000502315 STRCQ7RTU9 1775 aa11.5□□□□□ -0.57
SH3RF1-202ENST00000502315 HNRNPMP52272 730 aaKnown RBP eCLIP11.5□□□□□ -0.57
SH3RF1-202ENST00000502315 PKD2Q13563 968 aa11.5□□□□□ -0.57
SH3RF1-202ENST00000502315 ZNF777Q9ULD5 760 aaPredicted RBP11.5□□□□□ -0.57
SH3RF1-202ENST00000502315 CEP162Q5TB80 1403 aa11.49□□□□□ -0.57
SH3RF1-202ENST00000502315 A2MP01023 1474 aa11.49□□□□□ -0.57
SH3RF1-202ENST00000502315 ATP7AQ04656 1500 aa11.49□□□□□ -0.57
SH3RF1-202ENST00000502315 NCOA1Q15788 1441 aa11.48□□□□□ -0.57
SH3RF1-202ENST00000502315 SYCP2Q9BX26 1530 aa11.48□□□□□ -0.57
SH3RF1-202ENST00000502315 FAM135AQ9P2D6 1515 aa11.48□□□□□ -0.57
SH3RF1-202ENST00000502315 PLXNC1O60486 1568 aa11.48□□□□□ -0.57
SH3RF1-202ENST00000502315 PLA2R1Q13018 1463 aa11.47□□□□□ -0.57
SH3RF1-202ENST00000502315 INO80Q9ULG1 1556 aaPredicted RBP11.46□□□□□ -0.57
SH3RF1-202ENST00000502315 DHX29Q7Z478 1369 aaKnown RBP11.46□□□□□ -0.57
SH3RF1-202ENST00000502315 EHBP1L1Q8N3D4 1523 aa11.45□□□□□ -0.58
SH3RF1-202ENST00000502315 MBD5Q9P267 1494 aa11.45□□□□□ -0.58
SH3RF1-202ENST00000502315 ADGBQ8N7X0 1667 aa11.44□□□□□ -0.58
SH3RF1-202ENST00000502315 PTPRKQ15262 1439 aa11.43□□□□□ -0.58
SH3RF1-202ENST00000502315 GGT6Q6P531 493 aa11.42□□□□□ -0.58
SH3RF1-202ENST00000502315 LTBP4Q8N2S1 1624 aa11.42□□□□□ -0.58
SH3RF1-202ENST00000502315 TSPY4P0CV99 314 aa11.41□□□□□ -0.58
SH3RF1-202ENST00000502315 TSPY10P0CW01 314 aa11.41□□□□□ -0.58
SH3RF1-202ENST00000502315 CAMSAP1Q5T5Y3 1602 aa11.41□□□□□ -0.58
SH3RF1-202ENST00000502315 TIAM1Q13009 1591 aa11.41□□□□□ -0.58
SH3RF1-202ENST00000502315 ZNF142P52746 1687 aaPredicted RBP11.4□□□□□ -0.58
SH3RF1-202ENST00000502315 TCOF1Q13428 1488 aaKnown RBP11.4□□□□□ -0.58
SH3RF1-202ENST00000502315 SUPT6HQ7KZ85 1726 aaKnown RBP11.4□□□□□ -0.58
SH3RF1-202ENST00000502315 CCDC141Q6ZP82 1450 aa11.39□□□□□ -0.59
SH3RF1-202ENST00000502315 A2ML1A8K2U0 1454 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms