RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 POTEDQ86YR6 584 aa19.73■□□□□ 0.75
CNOT4-211ENST00000498534 SCAPERQ9BY12 1400 aa19.73■□□□□ 0.75
CNOT4-211ENST00000498534 MAGI2Q86UL8 1455 aa19.73■□□□□ 0.75
CNOT4-211ENST00000498534 ARHGAP35Q9NRY4 1499 aa19.73■□□□□ 0.75
CNOT4-211ENST00000498534 ARHGEF40Q8TER5 1519 aa19.72■□□□□ 0.75
CNOT4-211ENST00000498534 HECW1Q76N89 1606 aa19.72■□□□□ 0.75
CNOT4-211ENST00000498534 MADDQ8WXG6 1647 aa19.7■□□□□ 0.74
CNOT4-211ENST00000498534 ZMYM4Q5VZL5 1548 aa19.69■□□□□ 0.74
CNOT4-211ENST00000498534 ZFYVE16Q7Z3T8 1539 aa19.69■□□□□ 0.74
CNOT4-211ENST00000498534 MLECQ14165 292 aa19.68■□□□□ 0.74
CNOT4-211ENST00000498534 YEATS2Q9ULM3 1422 aa19.68■□□□□ 0.74
CNOT4-211ENST00000498534 CLIP1P30622 1438 aa19.66■□□□□ 0.74
CNOT4-211ENST00000498534 TROQ12816 1431 aaPredicted RBP19.65■□□□□ 0.74
CNOT4-211ENST00000498534 MYT1LQ9UL68 1186 aa19.64■□□□□ 0.73
CNOT4-211ENST00000498534 RIMS1Q86UR5 1692 aaKnown RBP19.64■□□□□ 0.73
CNOT4-211ENST00000498534 MYO5CQ9NQX4 1742 aa19.63■□□□□ 0.73
CNOT4-211ENST00000498534 PCF11O94913 1555 aaKnown RBP19.62■□□□□ 0.73
CNOT4-211ENST00000498534 ATP10AO60312 1499 aa19.62■□□□□ 0.73
CNOT4-211ENST00000498534 FBXO41Q8TF61 875 aa19.61■□□□□ 0.73
CNOT4-211ENST00000498534 KIF14Q15058 1648 aa19.61■□□□□ 0.73
CNOT4-211ENST00000498534 AFAP1Q8N556 730 aa19.6■□□□□ 0.73
CNOT4-211ENST00000498534 ARHGAP5Q13017 1502 aa19.6■□□□□ 0.73
CNOT4-211ENST00000498534 LMTK3Q96Q04 1460 aa19.6■□□□□ 0.73
CNOT4-211ENST00000498534 ZNF518AQ6AHZ1 1483 aa19.58■□□□□ 0.72
CNOT4-211ENST00000498534 HSPA2P54652 639 aa19.57■□□□□ 0.72
CNOT4-211ENST00000498534 C9orf84Q5VXU9 1444 aa19.57■□□□□ 0.72
CNOT4-211ENST00000498534 CASKIN1Q8WXD9 1431 aa19.56■□□□□ 0.72
CNOT4-211ENST00000498534 CCDC18Q5T9S5 1454 aa19.54■□□□□ 0.72
CNOT4-211ENST00000498534 SIGLEC1Q9BZZ2 1709 aa19.54■□□□□ 0.72
CNOT4-211ENST00000498534 FER1L4A9Z1Z3 1794 aa19.52■□□□□ 0.72
CNOT4-211ENST00000498534 LRRIQ1Q96JM4 1722 aa19.51■□□□□ 0.71
CNOT4-211ENST00000498534 CEBPAP49715 358 aaPredicted RBP19.5■□□□□ 0.71
CNOT4-211ENST00000498534 ARHGEF12Q9NZN5 1544 aa19.5■□□□□ 0.71
CNOT4-211ENST00000498534 ESF1Q9H501 851 aaKnown RBP19.49■□□□□ 0.71
CNOT4-211ENST00000498534 KDM5CP41229 1560 aa19.48■□□□□ 0.71
CNOT4-211ENST00000498534 CDC42BPBQ9Y5S2 1711 aa19.48■□□□□ 0.71
CNOT4-211ENST00000498534 ZNF777Q9ULD5 760 aaPredicted RBP19.47■□□□□ 0.71
CNOT4-211ENST00000498534 MLH3Q9UHC1 1453 aa19.47■□□□□ 0.71
CNOT4-211ENST00000498534 FYCO1Q9BQS8 1478 aa19.45■□□□□ 0.7
CNOT4-211ENST00000498534 TRAPPC8Q9Y2L5 1435 aa19.44■□□□□ 0.7
CNOT4-211ENST00000498534 PREX2Q70Z35 1606 aa19.43■□□□□ 0.7
CNOT4-211ENST00000498534 DMRT2Q9Y5R5 561 aa19.42■□□□□ 0.7
CNOT4-211ENST00000498534 DIP2CQ9Y2E4 1556 aa19.41■□□□□ 0.7
CNOT4-211ENST00000498534 SETD1BQ9UPS6 1966 aaKnown RBP19.41■□□□□ 0.7
CNOT4-211ENST00000498534 ABCC1P33527 1531 aa19.41■□□□□ 0.7
CNOT4-211ENST00000498534 REREQ9P2R6 1566 aa19.4■□□□□ 0.7
CNOT4-211ENST00000498534 CERKQ8TCT0 537 aa19.39■□□□□ 0.69
CNOT4-211ENST00000498534 CFDP1Q9UEE9 299 aaPredicted RBP19.39■□□□□ 0.69
CNOT4-211ENST00000498534 SPAG9O60271 1321 aaKnown RBP19.38■□□□□ 0.69
CNOT4-211ENST00000498534 HNRNPMP52272 730 aaKnown RBP eCLIP19.38■□□□□ 0.69
CNOT4-211ENST00000498534 CDC42BPAQ5VT25 1732 aa19.38■□□□□ 0.69
CNOT4-211ENST00000498534 PREX1Q8TCU6 1659 aa19.38■□□□□ 0.69
CNOT4-211ENST00000498534 ITSN2Q9NZM3 1697 aa19.37■□□□□ 0.69
CNOT4-211ENST00000498534 AGLP35573 1532 aa19.37■□□□□ 0.69
CNOT4-211ENST00000498534 UHRF1BP1Q6BDS2 1440 aa19.37■□□□□ 0.69
CNOT4-211ENST00000498534 ABCA6Q8N139 1617 aa19.36■□□□□ 0.69
CNOT4-211ENST00000498534 GPATCH8Q9UKJ3 1502 aaKnown RBP19.36■□□□□ 0.69
CNOT4-211ENST00000498534 MTUS2Q5JR59 1369 aa19.34■□□□□ 0.69
CNOT4-211ENST00000498534 CCNB3Q8WWL7 1395 aa19.34■□□□□ 0.69
CNOT4-211ENST00000498534 KIDINS220Q9ULH0 1771 aa19.33■□□□□ 0.68
CNOT4-211ENST00000498534 CNTLNQ9NXG0 1405 aa19.32■□□□□ 0.68
CNOT4-211ENST00000498534 PLEKHH2Q8IVE3 1493 aa19.31■□□□□ 0.68
CNOT4-211ENST00000498534 KIAA1107Q9UPP5 1409 aa19.31■□□□□ 0.68
CNOT4-211ENST00000498534 SAMD9LQ8IVG5 1584 aa19.31■□□□□ 0.68
CNOT4-211ENST00000498534 C3P01024 1663 aa19.29■□□□□ 0.68
CNOT4-211ENST00000498534 SYCP2Q9BX26 1530 aa19.29■□□□□ 0.68
CNOT4-211ENST00000498534 ZMYM3Q14202 1370 aa19.26■□□□□ 0.67
CNOT4-211ENST00000498534 STRCQ7RTU9 1775 aa19.25■□□□□ 0.67
CNOT4-211ENST00000498534 GGT6Q6P531 493 aa19.24■□□□□ 0.67
CNOT4-211ENST00000498534 ATP7AQ04656 1500 aa19.23■□□□□ 0.67
CNOT4-211ENST00000498534 ZNF644Q9H582 1327 aaPredicted RBP19.23■□□□□ 0.67
CNOT4-211ENST00000498534 SUPT6HQ7KZ85 1726 aaKnown RBP19.22■□□□□ 0.67
CNOT4-211ENST00000498534 A2MP01023 1474 aa19.22■□□□□ 0.67
CNOT4-211ENST00000498534 PTPRTO14522 1441 aa19.22■□□□□ 0.67
CNOT4-211ENST00000498534 NPATQ14207 1427 aa19.21■□□□□ 0.67
CNOT4-211ENST00000498534 CEP162Q5TB80 1403 aa19.18■□□□□ 0.66
CNOT4-211ENST00000498534 MROH2AA6NES4 1674 aa19.18■□□□□ 0.66
CNOT4-211ENST00000498534 EHBP1L1Q8N3D4 1523 aa19.17■□□□□ 0.66
CNOT4-211ENST00000498534 RSPH4AQ5TD94 716 aa19.17■□□□□ 0.66
CNOT4-211ENST00000498534 INO80Q9ULG1 1556 aaPredicted RBP19.17■□□□□ 0.66
CNOT4-211ENST00000498534 RTEL1-TNFRSF6BF6WH68 1400 aa19.15■□□□□ 0.66
CNOT4-211ENST00000498534 NCOA1Q15788 1441 aa19.15■□□□□ 0.66
CNOT4-211ENST00000498534 PLXNC1O60486 1568 aa19.15■□□□□ 0.66
CNOT4-211ENST00000498534 TIAM1Q13009 1591 aa19.15■□□□□ 0.66
CNOT4-211ENST00000498534 MBD5Q9P267 1494 aa19.14■□□□□ 0.65
CNOT4-211ENST00000498534 CLTCQ00610 1675 aaKnown RBP19.14■□□□□ 0.65
CNOT4-211ENST00000498534 ADGBQ8N7X0 1667 aa19.13■□□□□ 0.65
CNOT4-211ENST00000498534 DHX29Q7Z478 1369 aaKnown RBP19.12■□□□□ 0.65
CNOT4-211ENST00000498534 NCKAP5LQ9HCH0 1330 aa19.12■□□□□ 0.65
CNOT4-211ENST00000498534 CAMSAP1Q5T5Y3 1602 aa19.11■□□□□ 0.65
CNOT4-211ENST00000498534 KIF3BO15066 747 aa19.11■□□□□ 0.65
CNOT4-211ENST00000498534 PKD2Q13563 968 aa19.11■□□□□ 0.65
CNOT4-211ENST00000498534 PTPRKQ15262 1439 aa19.1■□□□□ 0.65
CNOT4-211ENST00000498534 TSPY4P0CV99 314 aa19.1■□□□□ 0.65
CNOT4-211ENST00000498534 TSPY10P0CW01 314 aa19.1■□□□□ 0.65
CNOT4-211ENST00000498534 NCOA2Q15596 1464 aa19.09■□□□□ 0.65
CNOT4-211ENST00000498534 CCDC141Q6ZP82 1450 aa19.06■□□□□ 0.64
CNOT4-211ENST00000498534 LOC105371045A0A1W2PR82 267 aa19.06■□□□□ 0.64
CNOT4-211ENST00000498534 WASHC2CQ9Y4E1 1318 aa19.05■□□□□ 0.64
CNOT4-211ENST00000498534 CAMSAP2Q08AD1 1489 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms