RNA–Protein interactions for RNA: ENST00000498479.5

RC3H2-210, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 2

Gene RC3H2, Length 5,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-210ENST00000498479 CHGAP10645 457 aaKnown RBP15.31■□□□□ 0.04
RC3H2-210ENST00000498479 LRRC9Q6ZRR7 1453 aa15.3■□□□□ 0.04
RC3H2-210ENST00000498479 RSPH6AQ9H0K4 717 aa15.3■□□□□ 0.04
RC3H2-210ENST00000498479 SLC24A1O60721 1099 aa15.3■□□□□ 0.04
RC3H2-210ENST00000498479 MYBBP1AQ9BQG0 1328 aaKnown RBP15.29■□□□□ 0.04
RC3H2-210ENST00000498479 PHLDB1Q86UU1 1377 aa15.29■□□□□ 0.04
RC3H2-210ENST00000498479 FRAT1Q92837 279 aaPredicted RBP15.28■□□□□ 0.04
RC3H2-210ENST00000498479 CCDC7Q96M83 1385 aa15.28■□□□□ 0.04
RC3H2-210ENST00000498479 ARAP1Q96P48 1450 aa15.28■□□□□ 0.04
RC3H2-210ENST00000498479 CHMP7Q8WUX9 453 aaPredicted RBP15.28■□□□□ 0.04
RC3H2-210ENST00000498479 HSCBQ8IWL3 235 aa15.27■□□□□ 0.04
RC3H2-210ENST00000498479 PNNQ9H307 717 aaKnown RBP15.27■□□□□ 0.03
RC3H2-210ENST00000498479 EIF4G1Q04637 1599 aaKnown RBP15.26■□□□□ 0.03
RC3H2-210ENST00000498479 EXOC6Q8TAG9 804 aa15.26■□□□□ 0.03
RC3H2-210ENST00000498479 CENPQQ7L2Z9 268 aaPredicted RBP15.25■□□□□ 0.03
RC3H2-210ENST00000498479 NCLP19338 710 aaKnown RBP15.25■□□□□ 0.03
RC3H2-210ENST00000498479 FGD6Q6ZV73 1430 aa15.25■□□□□ 0.03
RC3H2-210ENST00000498479 SYNJ1O43426 1573 aa15.24■□□□□ 0.03
RC3H2-210ENST00000498479 WASHC2AQ641Q2 1341 aa15.24■□□□□ 0.03
RC3H2-210ENST00000498479 HSP90AB1P08238 724 aaKnown RBP15.24■□□□□ 0.03
RC3H2-210ENST00000498479 TNNT2P45379 298 aaPredicted RBP15.24■□□□□ 0.03
RC3H2-210ENST00000498479 FAM161AQ3B820 660 aa15.24■□□□□ 0.03
RC3H2-210ENST00000498479 PTMSP20962 102 aa15.24■□□□□ 0.03
RC3H2-210ENST00000498479 CHMP4BQ9H444 224 aaKnown RBP15.23■□□□□ 0.03
RC3H2-210ENST00000498479 GOLGA6L3A6NEY3 463 aa15.22■□□□□ 0.03
RC3H2-210ENST00000498479 MSH5O43196 834 aa15.22■□□□□ 0.03
RC3H2-210ENST00000498479 ANKRD30AQ9BXX3 1397 aa15.21■□□□□ 0.03
RC3H2-210ENST00000498479 PRXQ9BXM0 1461 aa15.21■□□□□ 0.03
RC3H2-210ENST00000498479 GOLGA2Q08379 1002 aa15.21■□□□□ 0.03
RC3H2-210ENST00000498479 NEUROD2Q15784 382 aa15.21■□□□□ 0.03
RC3H2-210ENST00000498479 WDR97A6NE52 1622 aa15.21■□□□□ 0.03
RC3H2-210ENST00000498479 IGF1RP08069 1367 aa15.21■□□□□ 0.02
RC3H2-210ENST00000498479 SLKQ9H2G2 1235 aaPredicted RBP15.2■□□□□ 0.02
RC3H2-210ENST00000498479 PTMAP06454 111 aaKnown RBP15.2■□□□□ 0.02
RC3H2-210ENST00000498479 USP47Q96K76 1375 aa15.19■□□□□ 0.02
RC3H2-210ENST00000498479 KIF7Q2M1P5 1343 aa15.19■□□□□ 0.02
RC3H2-210ENST00000498479 CASC1Q6TDU7 716 aa15.19■□□□□ 0.02
RC3H2-210ENST00000498479 CUX1P39880 1505 aa15.19■□□□□ 0.02
RC3H2-210ENST00000498479 PMFBP1Q8TBY8 1022 aa15.19■□□□□ 0.02
RC3H2-210ENST00000498479 NUP155O75694 1391 aa15.18■□□□□ 0.02
RC3H2-210ENST00000498479 RWDD1Q9H446 243 aaPredicted RBP15.18■□□□□ 0.02
RC3H2-210ENST00000498479 MSNP26038 577 aaKnown RBP15.18■□□□□ 0.02
RC3H2-210ENST00000498479 GBP4Q96PP9 640 aa15.17■□□□□ 0.02
RC3H2-210ENST00000498479 MYOM3Q5VTT5 1437 aa15.17■□□□□ 0.02
RC3H2-210ENST00000498479 PAK3O75914 559 aaPredicted RBP15.16■□□□□ 0.02
RC3H2-210ENST00000498479 CADPSQ9ULU8 1353 aa15.16■□□□□ 0.02
RC3H2-210ENST00000498479 CRBNQ96SW2 442 aa15.15■□□□□ 0.02
RC3H2-210ENST00000498479 MAPK8IP3Q9UPT6 1336 aa15.15■□□□□ 0.02
RC3H2-210ENST00000498479 DNTTIP2Q5QJE6 756 aaKnown RBP15.15■□□□□ 0.02
RC3H2-210ENST00000498479 SMG6Q86US8 1419 aaKnown RBP15.14■□□□□ 0.01
RC3H2-210ENST00000498479 CASKIN1Q8WXD9 1431 aa15.14■□□□□ 0.01
RC3H2-210ENST00000498479 SPRYD3Q8NCJ5 442 aa15.14■□□□□ 0.01
RC3H2-210ENST00000498479 CFAP44Q96MT7 982 aa15.14■□□□□ 0.01
RC3H2-210ENST00000498479 ST20-MTHFSA0A0A6YYL1 179 aa15.13■□□□□ 0.01
RC3H2-210ENST00000498479 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.12■□□□□ 0.01
RC3H2-210ENST00000498479 SLC4A3P48751 1232 aa15.12■□□□□ 0.01
RC3H2-210ENST00000498479 GZF1Q9H116 711 aaPredicted RBP15.12■□□□□ 0.01
RC3H2-210ENST00000498479 TIAM1Q13009 1591 aa15.12■□□□□ 0.01
RC3H2-210ENST00000498479 NFKBIBQ15653 356 aa15.12■□□□□ 0.01
RC3H2-210ENST00000498479 TOP2BQ02880 1626 aa15.11■□□□□ 0.01
RC3H2-210ENST00000498479 PLIN1O60240 522 aa15.11■□□□□ 0.01
RC3H2-210ENST00000498479 FYCO1Q9BQS8 1478 aa15.11■□□□□ 0.01
RC3H2-210ENST00000498479 BRD4O60885 1362 aaPredicted RBP15.1■□□□□ 0.01
RC3H2-210ENST00000498479 HFM1A2PYH4 1435 aa15.09■□□□□ 0.01
RC3H2-210ENST00000498479 HSP90AA2PQ14568 343 aaPredicted RBP15.08■□□□□ 0
RC3H2-210ENST00000498479 TDRD9Q8NDG6 1382 aaKnown RBP15.08■□□□□ 0
RC3H2-210ENST00000498479 CENPJQ9HC77 1338 aaPredicted RBP15.08■□□□□ 0
RC3H2-210ENST00000498479 MORC1Q86VD1 984 aa15.08■□□□□ 0
RC3H2-210ENST00000498479 DDX11L8A8MPP1 907 aa15.07■□□□□ 0
RC3H2-210ENST00000498479 CGNL1Q0VF96 1302 aa15.07■□□□□ 0
RC3H2-210ENST00000498479 STAG3Q9UJ98 1225 aa15.06■□□□□ 0
RC3H2-210ENST00000498479 AKNAQ7Z591 1439 aa15.06■□□□□ 0
RC3H2-210ENST00000498479 BACH2Q9BYV9 841 aa15.06■□□□□ 0
RC3H2-210ENST00000498479 IPO8O15397 1037 aaKnown RBP15.06■□□□□ 0
RC3H2-210ENST00000498479 ANO8Q9HCE9 1232 aaPredicted RBP15.06■□□□□ 0
RC3H2-210ENST00000498479 NCOA2Q15596 1464 aa15.05■□□□□ -0
RC3H2-210ENST00000498479 IL27Q8NEV9 243 aa15.05■□□□□ -0
RC3H2-210ENST00000498479 MAP3K1Q13233 1512 aa15.04■□□□□ -0
RC3H2-210ENST00000498479 MIA2Q96PC5 1412 aa15.04■□□□□ -0
RC3H2-210ENST00000498479 PANK3Q9H999 370 aa15.04■□□□□ -0
RC3H2-210ENST00000498479 MFAP1P55081 439 aaKnown RBP15.03■□□□□ -0
RC3H2-210ENST00000498479 FGD5Q6ZNL6 1462 aa15.03■□□□□ -0
RC3H2-210ENST00000498479 E9PSI1 815 aa15.03■□□□□ -0
RC3H2-210ENST00000498479 NGEFQ8N5V2 710 aa15.03■□□□□ -0
RC3H2-210ENST00000498479 EIF3AQ14152 1382 aaKnown RBP15.02■□□□□ -0
RC3H2-210ENST00000498479 U2SURPO15042 1029 aaKnown RBP15.01□□□□□ -0.01
RC3H2-210ENST00000498479 EFCAB5A4FU69 1503 aa15.01□□□□□ -0.01
RC3H2-210ENST00000498479 CCDC184Q52MB2 194 aa15□□□□□ -0.01
RC3H2-210ENST00000498479 RSPH4AQ5TD94 716 aa15□□□□□ -0.01
RC3H2-210ENST00000498479 SKOR2Q2VWA4 1001 aaPredicted RBP15□□□□□ -0.01
RC3H2-210ENST00000498479 PNISRQ8TF01 805 aaKnown RBP14.99□□□□□ -0.01
RC3H2-210ENST00000498479 CARMIL2Q6F5E8 1435 aa14.99□□□□□ -0.01
RC3H2-210ENST00000498479 FAM43AQ8N2R8 423 aa14.99□□□□□ -0.01
RC3H2-210ENST00000498479 CCDC146Q8IYE0 955 aa14.99□□□□□ -0.01
RC3H2-210ENST00000498479 BRPF3Q9ULD4 1205 aa14.99□□□□□ -0.01
RC3H2-210ENST00000498479 KANK1Q14678 1352 aa14.99□□□□□ -0.01
RC3H2-210ENST00000498479 CHAF1AQ13111 956 aaPredicted RBP14.99□□□□□ -0.01
RC3H2-210ENST00000498479 PRKCSHP14314 528 aaPredicted RBP14.98□□□□□ -0.01
RC3H2-210ENST00000498479 ITPRIPQ8IWB1 547 aa14.98□□□□□ -0.01
RC3H2-210ENST00000498479 CCDC144AA2RUR9 1427 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms