RNA–Protein interactions for RNA: ENST00000497947.6

LMO7-213, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-213ENST00000497947 ZNF219Q9P2Y4 722 aaPredicted RBP13.18□□□□□ -0.3
LMO7-213ENST00000497947 IQGAP2Q13576 1575 aa13.18□□□□□ -0.3
LMO7-213ENST00000497947 DISP1Q96F81 1524 aa13.17□□□□□ -0.3
LMO7-213ENST00000497947 WDR7Q9Y4E6 1490 aa13.15□□□□□ -0.3
LMO7-213ENST00000497947 CD109Q6YHK3 1445 aa13.14□□□□□ -0.31
LMO7-213ENST00000497947 MAGI3Q5TCQ9 1506 aa13.13□□□□□ -0.31
LMO7-213ENST00000497947 KCNH8Q96L42 1107 aa13.12□□□□□ -0.31
LMO7-213ENST00000497947 ZCCHC11Q5TAX3 1644 aaKnown RBP13.11□□□□□ -0.31
LMO7-213ENST00000497947 UGGT2Q9NYU1 1516 aa13.11□□□□□ -0.31
LMO7-213ENST00000497947 RAPGEF2Q9Y4G8 1499 aa13.1□□□□□ -0.31
LMO7-213ENST00000497947 DSG3P32926 999 aa13.1□□□□□ -0.31
LMO7-213ENST00000497947 PRXQ9BXM0 1461 aa13.09□□□□□ -0.31
LMO7-213ENST00000497947 PTPRMP28827 1452 aa13.05□□□□□ -0.32
LMO7-213ENST00000497947 ARAP3Q8WWN8 1544 aa13.05□□□□□ -0.32
LMO7-213ENST00000497947 MIER1Q8N108 512 aa13.05□□□□□ -0.32
LMO7-213ENST00000497947 KIAA0556O60303 1618 aa13.05□□□□□ -0.32
LMO7-213ENST00000497947 CFAP43Q8NDM7 1665 aa13.05□□□□□ -0.32
LMO7-213ENST00000497947 PHLDB1Q86UU1 1377 aa13.05□□□□□ -0.32
LMO7-213ENST00000497947 RRBP1Q9P2E9 1410 aaKnown RBP13.04□□□□□ -0.32
LMO7-213ENST00000497947 DHX57Q6P158 1386 aaKnown RBP13.02□□□□□ -0.33
LMO7-213ENST00000497947 LMTK3Q96Q04 1460 aa13□□□□□ -0.33
LMO7-213ENST00000497947 ABCB7O75027 752 aa13□□□□□ -0.33
LMO7-213ENST00000497947 ADAMTSL3P82987 1691 aa12.99□□□□□ -0.33
LMO7-213ENST00000497947 MAP3K1Q13233 1512 aa12.98□□□□□ -0.33
LMO7-213ENST00000497947 ARID4BQ4LE39 1312 aaPredicted RBP12.98□□□□□ -0.33
LMO7-213ENST00000497947 RAPGEF3O95398 923 aa12.98□□□□□ -0.33
LMO7-213ENST00000497947 POLA2Q14181 598 aa12.98□□□□□ -0.33
LMO7-213ENST00000497947 ABCA8O94911 1581 aa12.98□□□□□ -0.33
LMO7-213ENST00000497947 YTHDC1Q96MU7 727 aaKnown RBP12.97□□□□□ -0.33
LMO7-213ENST00000497947 PCF11O94913 1555 aaKnown RBP12.97□□□□□ -0.33
LMO7-213ENST00000497947 CERKQ8TCT0 537 aa12.94□□□□□ -0.34
LMO7-213ENST00000497947 CCNB3Q8WWL7 1395 aa12.93□□□□□ -0.34
LMO7-213ENST00000497947 NEO1Q92859 1461 aa12.92□□□□□ -0.34
LMO7-213ENST00000497947 ATP10BO94823 1461 aa12.91□□□□□ -0.34
LMO7-213ENST00000497947 ARID3CA6NKF2 412 aa12.91□□□□□ -0.34
LMO7-213ENST00000497947 HSPA2P54652 639 aa12.91□□□□□ -0.34
LMO7-213ENST00000497947 SOCS7O14512 581 aa12.9□□□□□ -0.34
LMO7-213ENST00000497947 BCORL1Q5H9F3 1711 aa12.89□□□□□ -0.35
LMO7-213ENST00000497947 CTTNBP2Q8WZ74 1663 aa12.89□□□□□ -0.35
LMO7-213ENST00000497947 ABCA9Q8IUA7 1624 aa12.88□□□□□ -0.35
LMO7-213ENST00000497947 TIMELESSQ9UNS1 1208 aa12.88□□□□□ -0.35
LMO7-213ENST00000497947 MADDQ8WXG6 1647 aa12.88□□□□□ -0.35
LMO7-213ENST00000497947 ARHGAP35Q9NRY4 1499 aa12.86□□□□□ -0.35
LMO7-213ENST00000497947 DISP3Q9P2K9 1392 aa12.86□□□□□ -0.35
LMO7-213ENST00000497947 ILDR2Q71H61 639 aa12.86□□□□□ -0.35
LMO7-213ENST00000497947 POGZQ7Z3K3 1410 aa12.86□□□□□ -0.35
LMO7-213ENST00000497947 P3H3Q8IVL6 736 aa12.85□□□□□ -0.35
LMO7-213ENST00000497947 DENND4BO75064 1496 aaPredicted RBP12.83□□□□□ -0.36
LMO7-213ENST00000497947 KANK4Q5T7N3 995 aaPredicted RBP12.82□□□□□ -0.36
LMO7-213ENST00000497947 TIAM1Q13009 1591 aa12.81□□□□□ -0.36
LMO7-213ENST00000497947 FRMPD1Q5SYB0 1578 aa12.81□□□□□ -0.36
LMO7-213ENST00000497947 FHOD3Q2V2M9 1422 aa12.81□□□□□ -0.36
LMO7-213ENST00000497947 AKNAQ7Z591 1439 aa12.81□□□□□ -0.36
LMO7-213ENST00000497947 FANCAO15360 1455 aa12.8□□□□□ -0.36
LMO7-213ENST00000497947 ARHGEF40Q8TER5 1519 aa12.8□□□□□ -0.36
LMO7-213ENST00000497947 PLEKHD1A6NEE1 506 aa12.8□□□□□ -0.36
LMO7-213ENST00000497947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.8□□□□□ -0.36
LMO7-213ENST00000497947 RIMS1Q86UR5 1692 aaKnown RBP12.8□□□□□ -0.36
LMO7-213ENST00000497947 SETD5Q9C0A6 1442 aa12.79□□□□□ -0.36
LMO7-213ENST00000497947 SUPT16HQ9Y5B9 1047 aaKnown RBP12.79□□□□□ -0.36
LMO7-213ENST00000497947 RANGAP1P46060 587 aaPredicted RBP12.77□□□□□ -0.37
LMO7-213ENST00000497947 MLECQ14165 292 aa12.77□□□□□ -0.37
LMO7-213ENST00000497947 RAB3GAP2Q9H2M9 1393 aa12.77□□□□□ -0.37
LMO7-213ENST00000497947 YEATS2Q9ULM3 1422 aa12.77□□□□□ -0.37
LMO7-213ENST00000497947 MAGI2Q86UL8 1455 aa12.77□□□□□ -0.37
LMO7-213ENST00000497947 MKRN4PQ13434 485 aaPredicted RBP12.76□□□□□ -0.37
LMO7-213ENST00000497947 LRRC9Q6ZRR7 1453 aa12.76□□□□□ -0.37
LMO7-213ENST00000497947 RAPGEF6Q8TEU7 1601 aa12.74□□□□□ -0.37
LMO7-213ENST00000497947 CFAP74Q9C0B2 1584 aa12.74□□□□□ -0.37
LMO7-213ENST00000497947 ZMYM4Q5VZL5 1548 aa12.74□□□□□ -0.37
LMO7-213ENST00000497947 ZBTB12Q9Y330 459 aaPredicted RBP12.74□□□□□ -0.37
LMO7-213ENST00000497947 EFCAB5A4FU69 1503 aa12.73□□□□□ -0.37
LMO7-213ENST00000497947 ZFYVE16Q7Z3T8 1539 aa12.73□□□□□ -0.37
LMO7-213ENST00000497947 NUP153P49790 1475 aaKnown RBP12.73□□□□□ -0.37
LMO7-213ENST00000497947 RICTORQ6R327 1708 aa12.73□□□□□ -0.37
LMO7-213ENST00000497947 TTC37Q6PGP7 1564 aa12.71□□□□□ -0.37
LMO7-213ENST00000497947 SAMD9Q5K651 1589 aa12.7□□□□□ -0.38
LMO7-213ENST00000497947 CCER2I3L3R5 266 aa12.7□□□□□ -0.38
LMO7-213ENST00000497947 CEBPAP49715 358 aaPredicted RBP12.7□□□□□ -0.38
LMO7-213ENST00000497947 FYCO1Q9BQS8 1478 aa12.7□□□□□ -0.38
LMO7-213ENST00000497947 ATP10AO60312 1499 aa12.69□□□□□ -0.38
LMO7-213ENST00000497947 SCAPERQ9BY12 1400 aa12.69□□□□□ -0.38
LMO7-213ENST00000497947 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.67□□□□□ -0.38
LMO7-213ENST00000497947 ARHGEF12Q9NZN5 1544 aa12.67□□□□□ -0.38
LMO7-213ENST00000497947 PTPRTO14522 1441 aa12.67□□□□□ -0.38
LMO7-213ENST00000497947 UHRF1BP1Q6BDS2 1440 aa12.67□□□□□ -0.38
LMO7-213ENST00000497947 HECW1Q76N89 1606 aa12.66□□□□□ -0.38
LMO7-213ENST00000497947 SPATA31D1Q6ZQQ2 1576 aa12.66□□□□□ -0.38
LMO7-213ENST00000497947 PLCH2O75038 1416 aa12.66□□□□□ -0.38
LMO7-213ENST00000497947 C9orf84Q5VXU9 1444 aa12.66□□□□□ -0.38
LMO7-213ENST00000497947 EFCAB2Q5VUJ9 269 aa12.66□□□□□ -0.38
LMO7-213ENST00000497947 FER1L4A9Z1Z3 1794 aa12.66□□□□□ -0.38
LMO7-213ENST00000497947 SIGLEC1Q9BZZ2 1709 aa12.65□□□□□ -0.38
LMO7-213ENST00000497947 CASKIN1Q8WXD9 1431 aa12.65□□□□□ -0.38
LMO7-213ENST00000497947 PREX1Q8TCU6 1659 aa12.65□□□□□ -0.38
LMO7-213ENST00000497947 NEFLP07196 543 aa12.64□□□□□ -0.39
LMO7-213ENST00000497947 SETD1BQ9UPS6 1966 aaKnown RBP12.63□□□□□ -0.39
LMO7-213ENST00000497947 STRCQ7RTU9 1775 aa12.62□□□□□ -0.39
LMO7-213ENST00000497947 IQSEC2Q5JU85 1478 aa12.62□□□□□ -0.39
LMO7-213ENST00000497947 TSHZ2Q9NRE2 1034 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms