RNA–Protein interactions for RNA: ENST00000497807.1

MACF1-225, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MACF1, Length 2,689 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-225ENST00000497807 TMEM132AQ24JP5 1023 aa15.57■□□□□ 0.08
MACF1-225ENST00000497807 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.57■□□□□ 0.08
MACF1-225ENST00000497807 CYB5RLQ6IPT4 315 aa15.54■□□□□ 0.08
MACF1-225ENST00000497807 CARMIL2Q6F5E8 1435 aa15.54■□□□□ 0.08
MACF1-225ENST00000497807 CHRM1P11229 460 aaPredicted RBP15.53■□□□□ 0.08
MACF1-225ENST00000497807 CTTNBP2Q8WZ74 1663 aa15.52■□□□□ 0.08
MACF1-225ENST00000497807 ERCC6L2Q5T890 1561 aa15.51■□□□□ 0.07
MACF1-225ENST00000497807 TEX2Q8IWB9 1127 aa15.51■□□□□ 0.07
MACF1-225ENST00000497807 ARHGEF11O15085 1522 aa15.51■□□□□ 0.07
MACF1-225ENST00000497807 UGGT2Q9NYU1 1516 aa15.51■□□□□ 0.07
MACF1-225ENST00000497807 C11orf95C9JLR9 678 aaPredicted RBP15.5■□□□□ 0.07
MACF1-225ENST00000497807 ZFP91Q96JP5 570 aaPredicted RBP15.49■□□□□ 0.07
MACF1-225ENST00000497807 DISP1Q96F81 1524 aa15.49■□□□□ 0.07
MACF1-225ENST00000497807 CLIP1P30622 1438 aa15.49■□□□□ 0.07
MACF1-225ENST00000497807 SHROOM2Q13796 1616 aa15.48■□□□□ 0.07
MACF1-225ENST00000497807 CEP162Q5TB80 1403 aa15.48■□□□□ 0.07
MACF1-225ENST00000497807 PTPRGP23470 1445 aa15.47■□□□□ 0.07
MACF1-225ENST00000497807 IRX6P78412 446 aaPredicted RBP15.47■□□□□ 0.07
MACF1-225ENST00000497807 CHMP4BQ9H444 224 aaKnown RBP15.47■□□□□ 0.07
MACF1-225ENST00000497807 FHOD3Q2V2M9 1422 aa15.46■□□□□ 0.07
MACF1-225ENST00000497807 BBXQ8WY36 941 aaPredicted RBP15.45■□□□□ 0.06
MACF1-225ENST00000497807 ATP1B4Q9UN42 357 aaPredicted RBP15.44■□□□□ 0.06
MACF1-225ENST00000497807 ARHGAP35Q9NRY4 1499 aa15.44■□□□□ 0.06
MACF1-225ENST00000497807 RIMBP3CA6NJZ7 1639 aa15.43■□□□□ 0.06
MACF1-225ENST00000497807 RIMBP3BA6NNM3 1639 aa15.43■□□□□ 0.06
MACF1-225ENST00000497807 RIMBP3Q9UFD9 1639 aa15.43■□□□□ 0.06
MACF1-225ENST00000497807 ADRA2BP18089 450 aa15.42■□□□□ 0.06
MACF1-225ENST00000497807 KIAA0556O60303 1618 aa15.41■□□□□ 0.06
MACF1-225ENST00000497807 ARAP1Q96P48 1450 aa15.4■□□□□ 0.06
MACF1-225ENST00000497807 ARID3CA6NKF2 412 aa15.4■□□□□ 0.06
MACF1-225ENST00000497807 GTF2E1P29083 439 aaPredicted RBP15.4■□□□□ 0.06
MACF1-225ENST00000497807 YTHDC1Q96MU7 727 aaKnown RBP15.4■□□□□ 0.06
MACF1-225ENST00000497807 RRP9O43818 475 aaKnown RBP15.39■□□□□ 0.05
MACF1-225ENST00000497807 EFCAB5A4FU69 1503 aa15.39■□□□□ 0.05
MACF1-225ENST00000497807 HMGB1P09429 215 aaKnown RBP15.39■□□□□ 0.05
MACF1-225ENST00000497807 FTSJ3Q8IY81 847 aaKnown RBP15.39■□□□□ 0.05
MACF1-225ENST00000497807 SAMD9Q5K651 1589 aa15.38■□□□□ 0.05
MACF1-225ENST00000497807 SECISBP2LQ93073 1101 aaKnown RBP15.37■□□□□ 0.05
MACF1-225ENST00000497807 PLB1Q6P1J6 1458 aa15.35■□□□□ 0.05
MACF1-225ENST00000497807 POLR3GLQ9BT43 218 aa15.35■□□□□ 0.05
MACF1-225ENST00000497807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.34■□□□□ 0.05
MACF1-225ENST00000497807 IGSF3O75054 1194 aa15.34■□□□□ 0.05
MACF1-225ENST00000497807 NCLP19338 710 aaKnown RBP15.34■□□□□ 0.05
MACF1-225ENST00000497807 HNRNPUL2Q1KMD3 747 aaKnown RBP15.34■□□□□ 0.05
MACF1-225ENST00000497807 NPM1P06748 294 aaKnown RBP eCLIP15.34■□□□□ 0.05
MACF1-225ENST00000497807 CCDC9Q9Y3X0 531 aaKnown RBP15.34■□□□□ 0.05
MACF1-225ENST00000497807 FMN1Q68DA7 1419 aa15.33■□□□□ 0.04
MACF1-225ENST00000497807 UACAQ9BZF9 1416 aa15.33■□□□□ 0.04
MACF1-225ENST00000497807 CCER1Q8TC90 406 aaPredicted RBP15.32■□□□□ 0.04
MACF1-225ENST00000497807 CANXP27824 592 aaKnown RBP15.31■□□□□ 0.04
MACF1-225ENST00000497807 RNF216Q9NWF9 866 aaPredicted RBP15.31■□□□□ 0.04
MACF1-225ENST00000497807 KDM2AQ9Y2K7 1162 aa15.31■□□□□ 0.04
MACF1-225ENST00000497807 PRDM4Q9UKN5 801 aa15.31■□□□□ 0.04
MACF1-225ENST00000497807 STAC3Q96MF2 364 aa15.3■□□□□ 0.04
MACF1-225ENST00000497807 TICAM2Q86XR7 235 aa15.29■□□□□ 0.04
MACF1-225ENST00000497807 HSP90AA2PQ14568 343 aaPredicted RBP15.28■□□□□ 0.04
MACF1-225ENST00000497807 CNPY4Q8N129 248 aa15.28■□□□□ 0.04
MACF1-225ENST00000497807 CNGB1Q14028 1251 aaPredicted RBP15.26■□□□□ 0.03
MACF1-225ENST00000497807 PPP6R1Q9UPN7 881 aa15.26■□□□□ 0.03
MACF1-225ENST00000497807 CALD1Q05682 793 aaKnown RBP15.26■□□□□ 0.03
MACF1-225ENST00000497807 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.25■□□□□ 0.03
MACF1-225ENST00000497807 VPS8Q8N3P4 1428 aa15.25■□□□□ 0.03
MACF1-225ENST00000497807 ABCA8O94911 1581 aa15.23■□□□□ 0.03
MACF1-225ENST00000497807 ABCC2Q92887 1545 aa15.23■□□□□ 0.03
MACF1-225ENST00000497807 CASKIN1Q8WXD9 1431 aa15.23■□□□□ 0.03
MACF1-225ENST00000497807 ARID4BQ4LE39 1312 aaPredicted RBP15.23■□□□□ 0.03
MACF1-225ENST00000497807 UHRF1BP1LA0JNW5 1464 aa15.22■□□□□ 0.03
MACF1-225ENST00000497807 NUP153P49790 1475 aaKnown RBP15.22■□□□□ 0.03
MACF1-225ENST00000497807 ADCY10Q96PN6 1610 aa15.21■□□□□ 0.03
MACF1-225ENST00000497807 KCNH8Q96L42 1107 aa15.21■□□□□ 0.03
MACF1-225ENST00000497807 ATP10BO94823 1461 aa15.21■□□□□ 0.02
MACF1-225ENST00000497807 RAPGEF6Q8TEU7 1601 aa15.21■□□□□ 0.02
MACF1-225ENST00000497807 WASHC2CQ9Y4E1 1318 aa15.2■□□□□ 0.02
MACF1-225ENST00000497807 PLEKHD1A6NEE1 506 aa15.2■□□□□ 0.02
MACF1-225ENST00000497807 BRPF3Q9ULD4 1205 aa15.19■□□□□ 0.02
MACF1-225ENST00000497807 RTL5Q5HYW3 569 aaPredicted RBP15.19■□□□□ 0.02
MACF1-225ENST00000497807 PCF11O94913 1555 aaKnown RBP15.18■□□□□ 0.02
MACF1-225ENST00000497807 FKBP8Q14318 412 aa15.17■□□□□ 0.02
MACF1-225ENST00000497807 KDM5BQ9UGL1 1544 aa15.17■□□□□ 0.02
MACF1-225ENST00000497807 FYCO1Q9BQS8 1478 aa15.17■□□□□ 0.02
MACF1-225ENST00000497807 EPRSP07814 1512 aaKnown RBP15.17■□□□□ 0.02
MACF1-225ENST00000497807 PUS7Q96PZ0 661 aaKnown RBP15.17■□□□□ 0.02
MACF1-225ENST00000497807 CDK13Q14004 1512 aaKnown RBP15.16■□□□□ 0.02
MACF1-225ENST00000497807 CENPJQ9HC77 1338 aaPredicted RBP15.16■□□□□ 0.02
MACF1-225ENST00000497807 ARID3AQ99856 593 aa15.16■□□□□ 0.02
MACF1-225ENST00000497807 TRHP20396 242 aaPredicted RBP15.15■□□□□ 0.02
MACF1-225ENST00000497807 CLSTN1O94985 981 aa15.15■□□□□ 0.02
MACF1-225ENST00000497807 FAM43AQ8N2R8 423 aa15.14■□□□□ 0.01
MACF1-225ENST00000497807 KCNG1Q9UIX4 513 aa15.14■□□□□ 0.01
MACF1-225ENST00000497807 HECW1Q76N89 1606 aa15.14■□□□□ 0.01
MACF1-225ENST00000497807 PRDM10Q9NQV6 1147 aa15.14■□□□□ 0.01
MACF1-225ENST00000497807 ASXL2Q76L83 1435 aa15.14■□□□□ 0.01
MACF1-225ENST00000497807 KANK4Q5T7N3 995 aaPredicted RBP15.13■□□□□ 0.01
MACF1-225ENST00000497807 WASHC2AQ641Q2 1341 aa15.12■□□□□ 0.01
MACF1-225ENST00000497807 GRIPAP1Q4V328 841 aa15.11■□□□□ 0.01
MACF1-225ENST00000497807 VGFO15240 615 aaPredicted RBP15.11■□□□□ 0.01
MACF1-225ENST00000497807 FAM69CQ0P6D2 419 aa15.11■□□□□ 0.01
MACF1-225ENST00000497807 WWC1Q8IX03 1113 aa15.11■□□□□ 0.01
MACF1-225ENST00000497807 ZCCHC11Q5TAX3 1644 aaKnown RBP15.1■□□□□ 0.01
MACF1-225ENST00000497807 CFAP44Q96MT7 982 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms