RNA–Protein interactions for RNA: ENST00000497739.1

PTPN3-206, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 3

Gene PTPN3, Length 781 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-206ENST00000497739 FRMPD1Q5SYB0 1578 aa15.83■□□□□ 0.13
PTPN3-206ENST00000497739 MKRN4PQ13434 485 aaPredicted RBP15.82■□□□□ 0.12
PTPN3-206ENST00000497739 FBXO41Q8TF61 875 aa15.82■□□□□ 0.12
PTPN3-206ENST00000497739 PHLDB1Q86UU1 1377 aa15.81■□□□□ 0.12
PTPN3-206ENST00000497739 NEO1Q92859 1461 aa15.79■□□□□ 0.12
PTPN3-206ENST00000497739 EEA1Q15075 1411 aa15.79■□□□□ 0.12
PTPN3-206ENST00000497739 PCF11O94913 1555 aaKnown RBP15.79■□□□□ 0.12
PTPN3-206ENST00000497739 SAMD9Q5K651 1589 aa15.79■□□□□ 0.12
PTPN3-206ENST00000497739 LMTK3Q96Q04 1460 aa15.78■□□□□ 0.12
PTPN3-206ENST00000497739 MADDQ8WXG6 1647 aa15.77■□□□□ 0.12
PTPN3-206ENST00000497739 ARID3CA6NKF2 412 aa15.77■□□□□ 0.12
PTPN3-206ENST00000497739 RAPGEF3O95398 923 aa15.77■□□□□ 0.12
PTPN3-206ENST00000497739 BCORL1Q5H9F3 1711 aa15.77■□□□□ 0.11
PTPN3-206ENST00000497739 ARHGEF40Q8TER5 1519 aa15.74■□□□□ 0.11
PTPN3-206ENST00000497739 NUP153P49790 1475 aaKnown RBP15.74■□□□□ 0.11
PTPN3-206ENST00000497739 RAPGEF6Q8TEU7 1601 aa15.72■□□□□ 0.11
PTPN3-206ENST00000497739 P3H3Q8IVL6 736 aa15.71■□□□□ 0.11
PTPN3-206ENST00000497739 FAM9AQ8IZU1 332 aaPredicted RBP15.71■□□□□ 0.11
PTPN3-206ENST00000497739 ZBTB12Q9Y330 459 aaPredicted RBP15.71■□□□□ 0.11
PTPN3-206ENST00000497739 RICTORQ6R327 1708 aa15.68■□□□□ 0.1
PTPN3-206ENST00000497739 FHOD3Q2V2M9 1422 aa15.68■□□□□ 0.1
PTPN3-206ENST00000497739 SIGLEC1Q9BZZ2 1709 aa15.67■□□□□ 0.1
PTPN3-206ENST00000497739 ZMYM4Q5VZL5 1548 aa15.67■□□□□ 0.1
PTPN3-206ENST00000497739 RIMS1Q86UR5 1692 aaKnown RBP15.65■□□□□ 0.1
PTPN3-206ENST00000497739 DENND4BO75064 1496 aaPredicted RBP15.65■□□□□ 0.1
PTPN3-206ENST00000497739 FANCAO15360 1455 aa15.63■□□□□ 0.09
PTPN3-206ENST00000497739 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.63■□□□□ 0.09
PTPN3-206ENST00000497739 TTC37Q6PGP7 1564 aa15.62■□□□□ 0.09
PTPN3-206ENST00000497739 AKNAQ7Z591 1439 aa15.62■□□□□ 0.09
PTPN3-206ENST00000497739 YEATS2Q9ULM3 1422 aa15.62■□□□□ 0.09
PTPN3-206ENST00000497739 ARID4BQ4LE39 1312 aaPredicted RBP15.62■□□□□ 0.09
PTPN3-206ENST00000497739 HSPA2P54652 639 aa15.6■□□□□ 0.09
PTPN3-206ENST00000497739 ZFYVE16Q7Z3T8 1539 aa15.59■□□□□ 0.09
PTPN3-206ENST00000497739 CFAP74Q9C0B2 1584 aa15.58■□□□□ 0.09
PTPN3-206ENST00000497739 MAGI2Q86UL8 1455 aa15.57■□□□□ 0.08
PTPN3-206ENST00000497739 EFCAB5A4FU69 1503 aa15.57■□□□□ 0.08
PTPN3-206ENST00000497739 POGZQ7Z3K3 1410 aa15.56■□□□□ 0.08
PTPN3-206ENST00000497739 HECW1Q76N89 1606 aa15.55■□□□□ 0.08
PTPN3-206ENST00000497739 ARHGEF12Q9NZN5 1544 aa15.54■□□□□ 0.08
PTPN3-206ENST00000497739 UBTFP17480 764 aaKnown RBP15.53■□□□□ 0.08
PTPN3-206ENST00000497739 RANGAP1P46060 587 aaPredicted RBP15.53■□□□□ 0.08
PTPN3-206ENST00000497739 PLEKHD1A6NEE1 506 aa15.52■□□□□ 0.08
PTPN3-206ENST00000497739 CDK13Q14004 1512 aaKnown RBP15.52■□□□□ 0.07
PTPN3-206ENST00000497739 CERKQ8TCT0 537 aa15.51■□□□□ 0.07
PTPN3-206ENST00000497739 PLCH2O75038 1416 aa15.51■□□□□ 0.07
PTPN3-206ENST00000497739 FER1L4A9Z1Z3 1794 aa15.5■□□□□ 0.07
PTPN3-206ENST00000497739 SCAPERQ9BY12 1400 aa15.49■□□□□ 0.07
PTPN3-206ENST00000497739 ATP10AO60312 1499 aa15.47■□□□□ 0.07
PTPN3-206ENST00000497739 C9orf84Q5VXU9 1444 aa15.47■□□□□ 0.07
PTPN3-206ENST00000497739 PREX1Q8TCU6 1659 aa15.45■□□□□ 0.06
PTPN3-206ENST00000497739 MLECQ14165 292 aa15.44■□□□□ 0.06
PTPN3-206ENST00000497739 KDM5CP41229 1560 aa15.44■□□□□ 0.06
PTPN3-206ENST00000497739 STRCQ7RTU9 1775 aa15.42■□□□□ 0.06
PTPN3-206ENST00000497739 FKBP8Q14318 412 aa15.41■□□□□ 0.06
PTPN3-206ENST00000497739 KIF14Q15058 1648 aa15.41■□□□□ 0.06
PTPN3-206ENST00000497739 ZNF518AQ6AHZ1 1483 aa15.4■□□□□ 0.06
PTPN3-206ENST00000497739 CEBPAP49715 358 aaPredicted RBP15.4■□□□□ 0.06
PTPN3-206ENST00000497739 REREQ9P2R6 1566 aa15.4■□□□□ 0.06
PTPN3-206ENST00000497739 ILDR2Q71H61 639 aa15.39■□□□□ 0.05
PTPN3-206ENST00000497739 DIP2CQ9Y2E4 1556 aa15.39■□□□□ 0.05
PTPN3-206ENST00000497739 MYO5CQ9NQX4 1742 aa15.38■□□□□ 0.05
PTPN3-206ENST00000497739 SPDYE4A6NLX3 237 aa15.37■□□□□ 0.05
PTPN3-206ENST00000497739 UHRF1BP1Q6BDS2 1440 aa15.36■□□□□ 0.05
PTPN3-206ENST00000497739 ARHGAP35Q9NRY4 1499 aa15.36■□□□□ 0.05
PTPN3-206ENST00000497739 SPDYE2BA6NHP3 402 aa15.36■□□□□ 0.05
PTPN3-206ENST00000497739 SPDYE6P0CI01 402 aa15.36■□□□□ 0.05
PTPN3-206ENST00000497739 SPDYE2Q495Y8 402 aa15.36■□□□□ 0.05
PTPN3-206ENST00000497739 EFCAB2Q5VUJ9 269 aa15.36■□□□□ 0.05
PTPN3-206ENST00000497739 ABCA6Q8N139 1617 aa15.35■□□□□ 0.05
PTPN3-206ENST00000497739 TROQ12816 1431 aaPredicted RBP15.34■□□□□ 0.05
PTPN3-206ENST00000497739 FMN1Q68DA7 1419 aa15.34■□□□□ 0.05
PTPN3-206ENST00000497739 AFAP1Q8N556 730 aa15.34■□□□□ 0.05
PTPN3-206ENST00000497739 LTBP4Q8N2S1 1624 aa15.34■□□□□ 0.05
PTPN3-206ENST00000497739 DISP3Q9P2K9 1392 aa15.34■□□□□ 0.05
PTPN3-206ENST00000497739 PTPRTO14522 1441 aa15.34■□□□□ 0.05
PTPN3-206ENST00000497739 MLH3Q9UHC1 1453 aa15.33■□□□□ 0.05
PTPN3-206ENST00000497739 ARHGAP5Q13017 1502 aa15.33■□□□□ 0.05
PTPN3-206ENST00000497739 AGLP35573 1532 aa15.33■□□□□ 0.04
PTPN3-206ENST00000497739 SOCS7O14512 581 aa15.31■□□□□ 0.04
PTPN3-206ENST00000497739 ABCC1P33527 1531 aa15.31■□□□□ 0.04
PTPN3-206ENST00000497739 C3P01024 1663 aa15.31■□□□□ 0.04
PTPN3-206ENST00000497739 ATP1B4Q9UN42 357 aaPredicted RBP15.3■□□□□ 0.04
PTPN3-206ENST00000497739 TRAPPC8Q9Y2L5 1435 aa15.3■□□□□ 0.04
PTPN3-206ENST00000497739 SSUH2Q9Y2M2 353 aa15.3■□□□□ 0.04
PTPN3-206ENST00000497739 LRRIQ1Q96JM4 1722 aa15.29■□□□□ 0.04
PTPN3-206ENST00000497739 SPATA31D1Q6ZQQ2 1576 aa15.29■□□□□ 0.04
PTPN3-206ENST00000497739 NCOA1Q15788 1441 aa15.29■□□□□ 0.04
PTPN3-206ENST00000497739 ZNF692Q9BU19 519 aaPredicted RBP15.29■□□□□ 0.04
PTPN3-206ENST00000497739 RBM42Q9BTD8 480 aaKnown RBP15.28■□□□□ 0.04
PTPN3-206ENST00000497739 IQSEC2Q5JU85 1478 aa15.27■□□□□ 0.04
PTPN3-206ENST00000497739 CDC42BPBQ9Y5S2 1711 aa15.27■□□□□ 0.04
PTPN3-206ENST00000497739 PREX2Q70Z35 1606 aa15.27■□□□□ 0.03
PTPN3-206ENST00000497739 CDK11AQ9UQ88 783 aaPredicted RBP15.26■□□□□ 0.03
PTPN3-206ENST00000497739 CLIP1P30622 1438 aa15.26■□□□□ 0.03
PTPN3-206ENST00000497739 SETD1BQ9UPS6 1966 aaKnown RBP15.25■□□□□ 0.03
PTPN3-206ENST00000497739 PROM2Q8N271 834 aa15.24■□□□□ 0.03
PTPN3-206ENST00000497739 ITSN2Q9NZM3 1697 aa15.24■□□□□ 0.03
PTPN3-206ENST00000497739 KIDINS220Q9ULH0 1771 aa15.24■□□□□ 0.03
PTPN3-206ENST00000497739 CNTLNQ9NXG0 1405 aa15.23■□□□□ 0.03
PTPN3-206ENST00000497739 NPATQ14207 1427 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms